BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0091.p         (128 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776293.1| hypothetical protein Hsero_2893 [Herbaspiril...   117   8e-25
ref|XP_002535967.1| Glycine-rich RNA-binding protein, putative [...    65   3e-09

>ref|YP_003776293.1| hypothetical protein Hsero_2893 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64385.1| hypothetical protein Hsero_2893 [Herbaspirillum seropedicae SmR1]
          Length = 166

 Score =  117 bits (292), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/101 (99%), Positives = 100/101 (99%)

Query: 1   MSKPTLKFLGTALVVAAFSTGAIAQNSGSGTAGGSGSAGAGATGATGSTTTPGTGASGSG 60
           MSKPTLKFLGTALVVAAFSTGAIAQNSGSGTAGGSGSAGAGATGATGSTTTPGTGASGSG
Sbjct: 1   MSKPTLKFLGTALVVAAFSTGAIAQNSGSGTAGGSGSAGAGATGATGSTTTPGTGASGSG 60

Query: 61  SSSSGKSMRNHDRSGKSHSKSRSGNNPNATEMKDGPMGTSP 101
           SSSSGKSMRNHDRS KSHSKSRSGNNPNATEMKDGPMGTSP
Sbjct: 61  SSSSGKSMRNHDRSDKSHSKSRSGNNPNATEMKDGPMGTSP 101


>ref|XP_002535967.1| Glycine-rich RNA-binding protein, putative [Ricinus communis]
 gb|EEF26418.1| Glycine-rich RNA-binding protein, putative [Ricinus communis]
          Length = 86

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/32 (96%), Positives = 31/32 (96%)

Query: 68 MRNHDRSGKSHSKSRSGNNPNATEMKDGPMGT 99
          MRNHDRS KSHSKSRSGNNPNATEMKDGPMGT
Sbjct: 1  MRNHDRSDKSHSKSRSGNNPNATEMKDGPMGT 32