BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0089.p (419 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_841825.1| RTX toxin exported protein [Ralstonia eutropha ... 139 8e-31 ref|ZP_04629686.1| serine protease [Yersinia bercovieri ATCC 439... 99 2e-18 ref|ZP_08831310.1| hemolysin-type calcium binding protein [endos... 91 4e-16 emb|CBX73921.1| hypothetical protein YEW_HB30710 [Yersinia enter... 88 4e-15 ref|YP_004298929.1| putative serine protease [Yersinia enterocol... 87 5e-15 ref|YP_001005702.1| putative serine protease [Yersinia enterocol... 85 2e-14 ref|ZP_04638878.1| serine protease [Yersinia intermedia ATCC 299... 84 6e-14 ref|ZP_05971062.1| serine protease, subtilase family [Providenci... 83 1e-13 emb|CBY27924.1| calcium-dependent protease precursor [Yersinia e... 82 2e-13 ref|ZP_04758412.1| putative RTX toxin exported protein [Neisseri... 79 1e-12 >ref|YP_841825.1| RTX toxin exported protein [Ralstonia eutropha H16] emb|CAJ97095.1| RTX toxin exported protein [Ralstonia eutropha H16] Length = 2426 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 132/258 (51%), Gaps = 14/258 (5%) Query: 1 MPQPINSAQIARLKDLASIGK--TSEVYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFM 58 MP PI++ + ++ + G S+VY+ L G GY+Y A GV ++ +++G SALT+M Sbjct: 1 MPNPISARSLKDIRFQLNAGTLTPSQVYSRLEGYGYKYSGWAGGVADATSIAGASALTYM 60 Query: 59 DKQAAKQGHALSSEQEGRIKQDMANAYLDLLAYKAKKAGM-VNSEISYKEAWKFHNSVFE 117 A G L+ Q +IK DMA YLD L + + V +I +E W FH VF+ Sbjct: 61 HNTAKDLGRPLTGAQVEKIKLDMAKGYLDALYQQTIDGSLPVTRDIDSREVWNFHRQVFK 120 Query: 118 KNGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIAT 177 NGL PS WTLDTP ++EK GGPA +++W L G + AT +M +T Sbjct: 121 DNGLPPSAWTLDTPFRLMEKMGGPAQVERFWSMLRDTGGGYSDALAANTATLAFMYGAST 180 Query: 178 YGKTPELKQQAKDWLDAVPNVASPVVTAEML---ARLVLDGYVSPSLVNLSQMMKDLGSH 234 P ++ A DWL+ P +AS + R+ G+ V+ + ++++GSH Sbjct: 181 -SPDPVVRAMASDWLEKAPGIASGKELQNFMDAVGRIDQAGFFESMGVDAANTLREIGSH 239 Query: 235 -------LMDRLEYSVVR 245 L+DRL +S R Sbjct: 240 VQDQFKQLLDRLPFSDAR 257 >ref|ZP_04629686.1| serine protease [Yersinia bercovieri ATCC 43970] gb|EEQ05433.1| serine protease [Yersinia bercovieri ATCC 43970] Length = 1815 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 8/173 (4%) Query: 25 VYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFMDKQAAKQGHALSSEQEGRIKQDMANA 84 +Y +LA KG +Y +LA GVV D+ +G A+ +M++ AA+ ++ + I+ DMA Sbjct: 37 MYNYLASKGDRYAVLANGVVRGDSFAGAMAIYYMERTAAEHNKPITEVRLKNIRYDMAGG 96 Query: 85 YLDLLAYKAK-KAGMVNSEISYKEAWKFHNSVFEKNGLLPSTWTLDTPLSIIEKSGGPAA 143 YL+ L + G + +I++KEA +FH VF+++GL P TWTL+ + I+++ P Sbjct: 97 YLNALQNRLDISTGTIYGDINHKEAGQFHEIVFKRHGLPPETWTLEPVFNAIQETSRPT- 155 Query: 144 AQKYWENLLKRGQDPVAGTIDSLATQTWMAQIATYGKTPE-LKQQAKDWLDAV 195 YW+++L P S T MAQ + + +PE +++ ++ W + Sbjct: 156 ---YWQHVLNAAGKPAKELKLSFETYNMMAQSSMF--SPEAIRKTSRRWFSII 203 >ref|ZP_08831310.1| hemolysin-type calcium binding protein [endosymbiont of Riftia pachyptila (vent Ph05)] gb|EGV49774.1| hemolysin-type calcium binding protein [endosymbiont of Riftia pachyptila (vent Ph05)] Length = 1018 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 10/202 (4%) Query: 1 MPQPINSAQIA---RLKDLASIGKTSEVYTWLAGKGYQYPLLARGVVNSDTLSGVSALTF 57 M Q I Q+ R + + +VY L GKGY Y A GV N DT++G +AL + Sbjct: 1 MLQTITRQQLVDYRRRIESGGVKAVRQVYAELYGKGYNYAGWAAGVANGDTVAGQAALNY 60 Query: 58 MDKQA-----AKQGHALSSEQEGRIKQDMANAYLDLLAYKA-KKAGMVNSEISYKEAWKF 111 + A ++ LS + I+ DMA Y+ L A + G ++ ++ Y E KF Sbjct: 61 LKGTALMGMGGEECINLSLAEIDNIRVDMAEGYIKALISNADQNGGWIDRDVRYNETMKF 120 Query: 112 HNSVFEKNGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTW 171 H FEKN L WTL TP+ +I K A + W + G D + ++ + Sbjct: 121 HQEAFEKNNLSLENWTLYTPMELIRKEYDDQAVEDLWAQIRDTGGDGPDAVLVNIHLLGF 180 Query: 172 MAQIATYGKTPELKQQAKDWLD 193 + + Y P+++QQA+ WL+ Sbjct: 181 VFR-EGYSSDPQVQQQAQGWLE 201 >emb|CBX73921.1| hypothetical protein YEW_HB30710 [Yersinia enterocolitica W22703] Length = 363 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 13/202 (6%) Query: 5 INSAQIARLKDLASIGKTSE----VYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFMDK 60 +N+A +A + L + S+ +Y +LA KG +Y ++A GVV D+++G A+ +++ Sbjct: 13 LNAADLACARQLLKSHQESKNPGPMYDFLASKGDRYAVMANGVVRGDSVAGAMAIHYLES 72 Query: 61 QAAKQGHALSSEQEGRIKQDMANAYLDLLAYKAKK--AGMVNSEISYKEAWKFHNSVFEK 118 A ++ + I+ DMA YL + + + AG++ +I +K+A FHN F Sbjct: 73 VAESHDQPITETRLNNIRYDMARGYLAMQQSRLNENPAGIIYGDIDHKQAGSFHNRTFRD 132 Query: 119 NGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIATY 178 + L WTLD I+K PA YW+ +L P + S T MA A Sbjct: 133 HRLPSKAWTLDQVFRAIDKDSRPA----YWQQVLNAAGKPKEELLLSADTYQKMALSAKV 188 Query: 179 GKTPE-LKQQAKDWLDAVPNVA 199 G P+ ++Q +++W D V ++A Sbjct: 189 G--PDGIQQSSREWFDRVDSLA 208 >ref|YP_004298929.1| putative serine protease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gb|ADZ43226.1| putative serine protease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 1806 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 13/202 (6%) Query: 5 INSAQIARLKDLASIGKTSE----VYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFMDK 60 +N+A +A + L + S+ +Y +LA KG +Y ++A GVV D+++G A+ +++ Sbjct: 13 LNAADLACARQLLKSHQESKNPGPMYDFLASKGDRYAVMANGVVRGDSVAGAMAIHYLES 72 Query: 61 QAAKQGHALSSEQEGRIKQDMANAYLDLLAYKAKK--AGMVNSEISYKEAWKFHNSVFEK 118 A ++ + I+ DMA YL + + + AG++ +I +K+A FHN F Sbjct: 73 VAESHDQPITETRLNNIRYDMARGYLAMQQSRLNENPAGIIYGDIDHKQAGSFHNRTFRD 132 Query: 119 NGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIATY 178 + L WTLD I+K PA YW+ +L P + S T MA A Sbjct: 133 HRLPSKAWTLDQVFRAIDKDSRPA----YWQQVLNAAGKPKEELLLSADTYQKMALSAKV 188 Query: 179 GKTPE-LKQQAKDWLDAVPNVA 199 G P+ ++Q +++W D V ++A Sbjct: 189 G--PDGIQQSSREWFDRVDSLA 208 >ref|YP_001005702.1| putative serine protease [Yersinia enterocolitica subsp. enterocolitica 8081] emb|CAL11481.1| putative serine protease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 1803 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 17/204 (8%) Query: 5 INSAQIARLKDLASIGKTSE----VYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFMDK 60 +N+A +A + L K S+ +Y +LA KG +Y +LA GVV D+++G A+ +++ Sbjct: 13 LNAADLACARQLLEANKESKDPGPMYDFLASKGDRYAILANGVVRGDSIAGAMAIHYLES 72 Query: 61 QAAKQGHALSSEQEGRIKQDMANAYLDLLAYKAKKA--GMVNSEISYKEAWKFHNSVFEK 118 AA ++ + I+ DMA+ YL+ + + G++ +I +K+A +FHN ++ Sbjct: 73 VAASHNQPITEMRLKHIRYDMAHGYLNTQQKRLDDSPTGIIYGDIDHKQAGQFHNEELKR 132 Query: 119 NGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDP---VAGTIDSLATQTWMAQI 175 +GL WTLD I++ P YW+ +L P + ++D+ A++ Sbjct: 133 HGLPSKAWTLDPVFRAIDERSQPI----YWQWVLNAAGKPKEELRLSVDTYQKMALSAKV 188 Query: 176 ATYGKTPELKQQAKDWLDAVPNVA 199 A G ++Q +++W D V +++ Sbjct: 189 APDG----IRQSSREWFDRVDSLS 208 >ref|ZP_04638878.1| serine protease [Yersinia intermedia ATCC 29909] gb|EEQ16948.1| serine protease [Yersinia intermedia ATCC 29909] Length = 1814 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 11/195 (5%) Query: 5 INSAQIARLKDLASIGKTSE----VYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFMDK 60 +N+A +A + L K S+ +Y +LA KG +Y +LA GV D+++G A+ M+ Sbjct: 13 LNAADLACARQLLEAHKESKDPGPMYDFLASKGDRYAILANGVARGDSIAGAMAIHNMES 72 Query: 61 QAAKQGHALSSEQEGRIKQDMANAYLDLLAYKAKKA--GMVNSEISYKEAWKFHNSVFEK 118 + ++ I+ DMA+ YLD + + G++ +I +++A FHN VF Sbjct: 73 VGGRHNKPVTETDIKHIRYDMAHGYLDTQQKRLDDSPTGIIYGDIGHEQAAWFHNRVFGD 132 Query: 119 NGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIATY 178 +GL WTL + + + P YWE L G P S T +MA +++ Sbjct: 133 HGLPAEAWTLTEVFNAMTEDSRPI----YWEQTLSTGGRPFEELKHSFKTYQFMAYSSSF 188 Query: 179 GKTPELKQQAKDWLD 193 G + ++ + WLD Sbjct: 189 GP-DDTQKSTRQWLD 202 >ref|ZP_05971062.1| serine protease, subtilase family [Providencia rustigianii DSM 4541] gb|EFB74095.1| serine protease, subtilase family [Providencia rustigianii DSM 4541] Length = 417 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 9/231 (3%) Query: 13 LKDLASIGKTSEVYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFMDKQAAKQGHALSSE 72 LK L K +Y +LA KG +Y LA VV D+ SG AL ++++ + GH + Sbjct: 22 LKILVLTKKPELMYEYLASKGDRYAPLANSVVKGDSFSGRFALNYLEEVIIENGHIYNEV 81 Query: 73 QEGRIKQDMANAYLDLLAYKAKKA-GMVNSEISYKEAWKFHNSVFEKNGLLPSTWTLDTP 131 + +I+ DMA AY+ L + + + + +I+YKEA FH VFE+ L WTL Sbjct: 82 KLEKIRFDMAYAYIHTLRNRLQNSVTEIIGDINYKEAMAFHERVFERYKLPAEAWTLQPV 141 Query: 132 LSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIATYGKTPELKQQAKDW 191 ++I + YW+ L D SL+T M + + Y + Q W Sbjct: 142 FNVIPDEKD---REVYWQKALDAVGDTEKEAELSLSTMNIMFE-SLYDAPANKQLQTHRW 197 Query: 192 LDAVPNVASPVVTAEMLARLVLDGYVSPSL-VNLSQ---MMKDLGSHLMDR 238 + V ++ + V + + + + SPSL + L++ ++ + G+ L+DR Sbjct: 198 MRRVIDIDNAVDSVTITLKKTYGFFESPSLEIGLNEARALVYETGNPLIDR 248 >emb|CBY27924.1| calcium-dependent protease precursor [Yersinia enterocolitica subsp. palearctica Y11] Length = 1280 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 13/202 (6%) Query: 5 INSAQIARLKDLASIGKTSE----VYTWLAGKGYQYPLLARGVVNSDTLSGVSALTFMDK 60 +N+A +A + L + S+ +Y +LA KG +Y +LA GV D+++G A+ +++ Sbjct: 13 LNAADLACARQLLESHQESKNPGPMYDFLASKGDRYAVLANGVARGDSIAGAMAIHYLES 72 Query: 61 QAAKQGHALSSEQEGRIKQDMANAYLDLLAYKAKK--AGMVNSEISYKEAWKFHNSVFEK 118 A ++ + I+ DMA YL + + + G++ +I++++A FHN F Sbjct: 73 VAESHDRPITETRLNNIRYDMARGYLAMQQSRLDENPVGIIYGDINHEQATWFHNRAFRD 132 Query: 119 NGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIATY 178 + L WTLD L I++ PA YWE +L P + S T MA A Sbjct: 133 HRLPSKAWTLDAVLRAIDEKSRPA----YWEQVLNAAGKPKEELLLSADTYQKMALSAKV 188 Query: 179 GKTPE-LKQQAKDWLDAVPNVA 199 G P+ ++Q +++W D V ++A Sbjct: 189 G--PDGIQQSSREWFDRVDSLA 208 >ref|ZP_04758412.1| putative RTX toxin exported protein [Neisseria flavescens SK114] gb|EER55673.1| putative RTX toxin exported protein [Neisseria flavescens SK114] Length = 324 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 15/188 (7%) Query: 1 MPQPINSAQIARLKDLASIGKTS---EVYTWLAGKGYQYPLLARGVVNSDTLSGVSALTF 57 M Q I I R + + K VY L KGY Y A GV ++++G +AL F Sbjct: 1 MRQTITQKDIDRYSSMINQNKVQGAVAVYEELRQKGYGYAGWAHGVATGESVTGRAALGF 60 Query: 58 MDKQAAKQGHALSSEQEGRIKQDMANAYLDLLAYKAKKA-GMVNSEISYKEAWKFHNSVF 116 + A ++ L+ + I+ MAN YL+ L+ KK G ++I++++ FH VF Sbjct: 61 LTDTANRE---LTQAEMDGIRIGMANGYLNALSANIKKGHGKTQTDITFEQMRNFHKDVF 117 Query: 117 EKNGLLPSTWTLDTPLSIIEKSGGPAAAQKYWENLLKRGQDPVAGTIDSLATQTWMAQIA 176 EK+ L + WTL+TP+ ++ K GG AQ E + +R +D+L MA ++ Sbjct: 118 EKHHLSINNWTLETPMYLLGKYGGGKKAQ---EEVWQRLAATEGYGMDAL-----MASMS 169 Query: 177 TYGKTPEL 184 Y T E Sbjct: 170 LYNMTVEF 177