BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0081.p (379 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776283.1| outer membrane porin [Herbaspirillum seroped... 733 0.0 ref|YP_004751955.1| outer membrane protein [Collimonas fungivora... 488 e-136 ref|YP_004754681.1| outer membrane protein [Collimonas fungivora... 295 9e-78 ref|YP_003773619.1| outer membrane protein (porin) signal peptid... 262 7e-68 ref|YP_003777672.1| outer membrane porin [Herbaspirillum seroped... 258 1e-66 ref|YP_004754680.1| outer membrane protein [Collimonas fungivora... 248 1e-63 ref|YP_003774420.1| porin signal peptide protein [Herbaspirillum... 214 2e-53 ref|YP_776652.1| porin [Burkholderia ambifaria AMMD] >gi|1152848... 165 1e-38 ref|ZP_02893072.1| porin Gram-negative type [Burkholderia ambifa... 162 7e-38 ref|YP_370985.1| outer membrane protein (porin) [Burkholderia sp... 160 3e-37 >ref|YP_003776283.1| outer membrane porin [Herbaspirillum seropedicae SmR1] gb|ADJ64375.1| outer membrane (porin) protein [Herbaspirillum seropedicae SmR1] Length = 372 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/372 (98%), Positives = 371/372 (99%) Query: 8 LCAYAFAHAALAQSPAAASAASSSSVTVYGVIDMSLVYTSKVGPDNGSRASLDSGDAMAS 67 +CAYAFAHAALAQSPAAASAASSSSVTVYGVIDMSLVYTSKVGPDNGSRASLDSGDAMAS Sbjct: 1 MCAYAFAHAALAQSPAAASAASSSSVTVYGVIDMSLVYTSKVGPDNGSRASLDSGDAMAS 60 Query: 68 RIGLRGREELGDGLAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLAGRFGTLTVGRQTD 127 RIGLRGREELGDGLAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLAGRFGTLTVGRQTD Sbjct: 61 RIGLRGREELGDGLAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLAGRFGTLTVGRQTD 120 Query: 128 YLEEIGQQYTSFQIFGGGGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGE 187 YLEEIGQQYTSFQIFGGGGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGE Sbjct: 121 YLEEIGQQYTSFQIFGGGGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGE 180 Query: 188 VAGSTRSGQSLGVGGNFRRGDVGVGAAYFQSKLASDALPARAGDTELKTFTLGASYQAGP 247 VAGSTRSGQSLGVGGNFRRG+VGVGAAYFQSKLASDALPARAGDTELKTFTLGASYQAGP Sbjct: 181 VAGSTRSGQSLGVGGNFRRGNVGVGAAYFQSKLASDALPARAGDTELKTFTLGASYQAGP 240 Query: 248 AKLFAAWSQIRRPTQQPLSSSGLVAITSATRANVLDVGVDYALDSKLHLLASVIHDRADL 307 AKLFAAWSQIRRPTQQPL+SSGLVAITSATRANVLDVGVDYALDSKLHLLASVIHDRADL Sbjct: 241 AKLFAAWSQIRRPTQQPLASSGLVAITSATRANVLDVGVDYALDSKLHLLASVIHDRADL 300 Query: 308 SRAAGGATRGSTTQFNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAAYSSAPADDSS 367 SRAAGGATRGSTTQ NLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAAYSSAPADDSS Sbjct: 301 SRAAGGATRGSTTQVNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAAYSSAPADDSS 360 Query: 368 QNVLRVGLRHKF 379 QNVLRVGLRHKF Sbjct: 361 QNVLRVGLRHKF 372 >ref|YP_004751955.1| outer membrane protein [Collimonas fungivorans Ter331] gb|AEK61132.1| Outer membrane protein [Collimonas fungivorans Ter331] Length = 370 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 237/367 (64%), Positives = 291/367 (79%), Gaps = 2/367 (0%) Query: 13 FAHAALAQSPAAASAASSSSVTVYGVIDMSLVYTSKVGPDNGSRASLDSGDAMASRIGLR 72 FA AAL A+A + ++VT+YGVID L YTSKVGP N SR SLDSGD SRIG R Sbjct: 6 FALAALGL--IGANAQAQTNVTIYGVIDAGLTYTSKVGPKNDSRISLDSGDMATSRIGFR 63 Query: 73 GREELGDGLAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLAGRFGTLTVGRQTDYLEEI 132 G E+LG GL AIFQLE GF DDG++AT TLFDRK+VVGL+G FGT+T+GRQTDYL++I Sbjct: 64 GTEDLGGGLKAIFQLENGFNADDGSLATASTLFDRKAVVGLSGSFGTVTLGRQTDYLDDI 123 Query: 133 GQQYTSFQIFGGGGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGEVAGST 192 G +YTS Q FG G++A HFN+LDR+ G R+NNS+R+D+A G GS +YG GEVAG T Sbjct: 124 GSKYTSVQTFGSNGIKAGHFNNLDRVGGVRANNSIRYDSANLSGFTGSLFYGFGEVAGQT 183 Query: 193 RSGQSLGVGGNFRRGDVGVGAAYFQSKLASDALPARAGDTELKTFTLGASYQAGPAKLFA 252 +GQS G+ GN+ G G+G YFQ+KLA+DALP++AGDT+LKTFTLGASYQAGPAK++ Sbjct: 184 SAGQSFGLAGNYANGPFGIGLGYFQTKLAADALPSKAGDTDLKTFTLGASYQAGPAKIYG 243 Query: 253 AWSQIRRPTQQPLSSSGLVAITSATRANVLDVGVDYALDSKLHLLASVIHDRADLSRAAG 312 AWSQ +RP L+++GLV IT+AT+AN+ D+GVDY+L LHLLASVI+DRADLSR Sbjct: 244 AWSQTKRPLAAALAATGLVNITTATKANIFDLGVDYSLSGNLHLLASVIYDRADLSRKTA 303 Query: 313 GATRGSTTQFNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAAYSSAPADDSSQNVLR 372 G+T+G TTQ NLGVD LSKRTD+YA+ + Q+A DV NPG+I+AAYSSAPADD+SQNV R Sbjct: 304 GSTKGKTTQLNLGVDYYLSKRTDLYALYTNQRANDVNNPGVINAAYSSAPADDTSQNVFR 363 Query: 373 VGLRHKF 379 VGLRHKF Sbjct: 364 VGLRHKF 370 >ref|YP_004754681.1| outer membrane protein [Collimonas fungivorans Ter331] gb|AAT42406.1| outer membrane protein [Collimonas fungivorans Ter331] gb|AEK63858.1| Outer membrane protein [Collimonas fungivorans Ter331] Length = 390 Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 173/382 (45%), Positives = 239/382 (62%), Gaps = 46/382 (12%) Query: 31 SSVTVYGVIDMSLVYTSKVGPDNG---SRASLDSGDAMASRIGLRGREELGDGLAAIFQL 87 SSVT+YG++D +VYTSK G S+ S++SG SR+G +G E+LG GL A+FQL Sbjct: 22 SSVTIYGIVDTGIVYTSKALTSTGGTGSKFSINSGIIQGSRLGFKGVEDLGGGLKALFQL 81 Query: 88 ETGFAGDDGAM---ATPGTLFDRKSVVGLAGRFGTLTVGRQTDYLEEIGQQYTSFQIFGG 144 E GF D G + TLF RKSVVGL G FG++ +GRQTD L+++ Q+TS Q FGG Sbjct: 82 EAGFNNDTGGLQGDKGTTTLFRRKSVVGLGGNFGSVLLGRQTDILDDV-SQWTSVQDFGG 140 Query: 145 GGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGEVAGSTRSGQSLGVGGNF 204 V + ++LDR+ G R+NNS+R++T + G GS YG GE AG T +GQS G G + Sbjct: 141 --VTGSVGHNLDRLEGTRTNNSIRYNTPDVSGFTGSLIYGFGETAGQTSAGQSFGAGAQY 198 Query: 205 RRGDVGVGAAYFQSKL----ASDA----------LPARAGDTELKTFTLGASYQAGPAKL 250 G +G+ AAY+QSKL ASD ++GDT LKTF++GASYQAGPA+L Sbjct: 199 ANGPLGLFAAYYQSKLGSPTASDTSLINGSQVANFSGKSGDTALKTFSIGASYQAGPARL 258 Query: 251 FAAWSQIRRPTQQPLSSSGLVAIT-------------SATRANVLDVGVDYALDSKLHLL 297 + WS+ T+QPL++S A T + T+A++ ++GV+YA+ + LHLL Sbjct: 259 YGNWSR----TKQPLATSSNSATTGILQPGSFTVGSFNNTKADIFELGVNYAVTAPLHLL 314 Query: 298 ASVIHDRADLSRAAGGATRGSTTQFNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAA 357 ASV +++ L+ A GA +G TQFNLG D LSKRTD+YA S +A+D +NPG+ Sbjct: 315 ASVQYNK--LTFADAGADKGKLTQFNLGTDYFLSKRTDLYAFVSNLRAKDAVNPGV---- 368 Query: 358 YSSAPADDSSQNVLRVGLRHKF 379 Y + D +Q + VG+RHKF Sbjct: 369 YGDSLGDTGNQTAVAVGIRHKF 390 >ref|YP_003773619.1| outer membrane protein (porin) signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ61711.1| outer membrane protein (porin) signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 390 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 223/382 (58%), Gaps = 46/382 (12%) Query: 31 SSVTVYGVIDMSLVYTSKVGPDNG---SRASLDSGDAMASRIGLRGREELGDGLAAIFQL 87 SSVT+YG++D +VY SKV G S+ SL+SG SRIG +G E+LG GL+A+F L Sbjct: 22 SSVTIYGIVDTGVVYQSKVATPTGGTGSKFSLNSGVIQGSRIGFKGTEDLGGGLSAVFNL 81 Query: 88 ETGFAGDDGAM---ATPGTLFDRKSVVGLAGRFGTLTVGRQTDYLEEIGQQYTSFQIFGG 144 E GF+ D GA+ T TLF RKSVVGLAG FG++ +GRQTD+ + I YTS Q FGG Sbjct: 82 EAGFSNDTGALDDSKTSNTLFRRKSVVGLAGNFGSVLLGRQTDFADTI-SSYTSVQDFGG 140 Query: 145 GGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGEVAGSTRSGQSLGVGGNF 204 A H +LDR+ G R+NNS+ + TA G G+ YG GE AG T +GQ+ GVGG + Sbjct: 141 WTGAAGH--NLDRLEGTRTNNSISYTTANLNGFTGNLMYGFGETAGQTSAGQAFGVGGKY 198 Query: 205 RRGDVGVGAAYFQSKLASDALPARA-----------------GDTELKTFTLGASYQAGP 247 G +G+G Y+QSK S PA A G T K + ASYQ GP Sbjct: 199 DNGPLGLGINYYQSKAGS--TPADASLLAATGTNQFTNGTNNGSTAQKVLNVAASYQFGP 256 Query: 248 AKLFAAWSQIRRP--TQQPLSSSG---LVAITSAT-----RANVLDVGVDYALDSKLHLL 297 A+++ WS++++ TQ L+++G L I++ T +A++ ++G Y+L L LL Sbjct: 257 ARVYGNWSRVKQDLNTQANLTAAGVGSLATISNRTLAASNKADIYEIGTAYSLSPSLKLL 316 Query: 298 ASVIHDRADLSRAAGGATRGSTTQFNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAA 357 A+V H RA +G + TQ +LG D LSKRTD+YA + +A D+ NPG+ Sbjct: 317 AAVDHTRAQFDGVSG---KAKLTQVSLGTDYWLSKRTDLYAFLAYSKATDLNNPGV---- 369 Query: 358 YSSAPADDSSQNVLRVGLRHKF 379 + + D +Q + VG+RHKF Sbjct: 370 -ADSSGTDGNQGAVAVGIRHKF 390 >ref|YP_003777672.1| outer membrane porin [Herbaspirillum seropedicae SmR1] emb|CAP19662.1| porin [Herbaspirillum seropedicae] gb|ADJ65764.1| outer membrane (porin) protein [Herbaspirillum seropedicae SmR1] Length = 387 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 160/380 (42%), Positives = 224/380 (58%), Gaps = 45/380 (11%) Query: 31 SSVTVYGVIDMSLVYTSKVGPDN-------GSRASLDSGDAMASRIGLRGREELGDGLAA 83 SSVT+YG++D + Y+SKVG + GS+ ++SG SRIG +G E+LG GL+A Sbjct: 22 SSVTIYGIVDTGIAYSSKVGYTDANGNAATGSKFGINSGVIQGSRIGFKGVEDLGGGLSA 81 Query: 84 IFQLETGFAGDDGAM-----ATPGTLFDRKSVVGLAGRFGTLTVGRQTDYLEEIGQQYTS 138 +F LETGF DDG + T LF RKSVVGL+G FGT+ +GRQTD+ + I YT+ Sbjct: 82 VFNLETGFTSDDGGLQGSDAVTSSNLFRRKSVVGLSGGFGTVLLGRQTDFADTI-SAYTA 140 Query: 139 FQIFGGGGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGEVAGSTRSGQSL 198 FGG V A +SL+R+ G R+NNS+ + TA G G+ YG GE AG T +GQ+ Sbjct: 141 VADFGG--VVANSGSSLNRLQGTRTNNSVSYTTANLSGFTGNLIYGFGEQAGKTSAGQAY 198 Query: 199 GVGGNFRRGDVGVGAAYFQSKLASDA-----LPAR-----------AGDTELKTFTLGAS 242 G+GG + G +G+G Y+QSK S +PA AG+T LK+ + AS Sbjct: 199 GIGGKYDNGPLGLGINYYQSKAGSTPSDTSLIPAAGATNANTALGVAGNTALKSLNVVAS 258 Query: 243 YQAGPAKLFAAWSQIRRPTQQPLSSSGLVA---ITSATRANVLDVGVDYALDSKLHLLAS 299 YQ GPA+++A +S+++ Q L + VA + +A +A+ ++G Y+L L LLA+ Sbjct: 259 YQFGPARVYANYSRVK----QDLKGTPTVATATLANAQKADTYEIGTAYSLSPSLKLLAA 314 Query: 300 VIHDRADLSRAAGGATRGSTTQFNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAAYS 359 V H RA + G T+G TQ +LG D LSKRTD+YA S +A D+ NPG+ A Sbjct: 315 VDHSRATFN---GVNTKGKLTQISLGADYFLSKRTDLYAFVSNMRASDIQNPGVTGGATG 371 Query: 360 SAPADDSSQNVLRVGLRHKF 379 S D+SQ + G+RHKF Sbjct: 372 S----DASQTAIITGIRHKF 387 >ref|YP_004754680.1| outer membrane protein [Collimonas fungivorans Ter331] gb|AAT42405.1| outer membrane protein [Collimonas fungivorans Ter331] gb|AEK63857.1| Outer membrane protein [Collimonas fungivorans Ter331] Length = 371 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 149/367 (40%), Positives = 209/367 (56%), Gaps = 35/367 (9%) Query: 31 SSVTVYGVIDMSLVYTSKV--------GPDNGSRASLDSGDAMASRIGLRGREELGDGLA 82 SSVT+YG +D + Y++ G GS+ + SG+ SRIG +G E+LG GL Sbjct: 22 SSVTIYGTVDAGVTYSNNNVPANNANDGRLGGSKFGVGSGNIDTSRIGFKGVEDLGGGLK 81 Query: 83 AIFQLETGFAGDDGAMATPGTLFDRKSVVGLAGRFGTLTVGRQTDYLEEIGQQYTSFQIF 142 A+FQLE GF D G +LF+RKSVVGL G FG++ +GRQ+D L++ G QYTS + F Sbjct: 82 ALFQLEAGFNTDTGGFEQDKSLFNRKSVVGLGGNFGSVLLGRQSDVLDDYGHQYTSVKDF 141 Query: 143 GGGGVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYGAGEVAGSTRSGQSLGVGG 202 G V + H DR+ G+R+ NS+R+++ + G+ S YG GE AG+ +GQ+ G G Sbjct: 142 -GNFVGSPHVG--DRLEGSRTQNSIRYNSPSFSGVTASAIYGFGEEAGANSNGQAFGGGV 198 Query: 203 NFRRGDVGVGAAYFQSKLASDAL---------PARAGDTELKTFTLGASYQAGPAKLFAA 253 + G +G Y+QSK ++ P GDT KTF+LGASYQAGPA+L+ Sbjct: 199 AYDNGPLGAYLGYYQSKAGKNSADTAPLFQLNPVAEGDTMNKTFSLGASYQAGPARLYGN 258 Query: 254 WSQIRRPTQQPLSSSGLVAITSATRANVLDVGVDYALDSKLHLLASVIHDRADLS-RAAG 312 WS+I P Q + N+ ++G DYAL + LHLLASV H + L G Sbjct: 259 WSRINVPEQY--------------KQNIFELGTDYALTAPLHLLASVQHTQYSLDGNTEG 304 Query: 313 GATRGSTTQFNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAAYSSAPADDSSQNVLR 372 +++ TQ NLGVD LSKRTD+Y +AS + ++ G SA A S+Q + Sbjct: 305 NSSKPQVTQVNLGVDYYLSKRTDLYTLASYAKGKNGAPVGDYSAPAVQNDAGKSNQAAVA 364 Query: 373 VGLRHKF 379 +G+RHKF Sbjct: 365 IGIRHKF 371 >ref|YP_003774420.1| porin signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ62512.1| porin signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 405 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 157/425 (36%), Positives = 215/425 (50%), Gaps = 66/425 (15%) Query: 1 MKKISLSLCAY-AFAHAALAQSPAAASAASSSSVTVYGVIDMSLVYTSKV---GPDNGSR 56 MKK L+L AFA AA AQS SS+T+YG ID SL YT+K+ G + GS Sbjct: 1 MKKSLLALAVLGAFAGAAHAQS---------SSITIYGAIDASLTYTNKIATDGKNTGSL 51 Query: 57 ASLDSGDAMASRIGLRGREELGDGLAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLAGR 116 +++SG SR+G++G E+LG GL A+F LE GF D G ++ R++ VGL+G Sbjct: 52 TAVESGLVKGSRLGIKGSEDLGGGLKAVFTLENGFNVDTGEAGQGKLMWGRQTTVGLSGN 111 Query: 117 FGTLTVGRQTDYLEEIGQQYTSFQIFGGGGVRA-AHFNSLDRITGARSNNSLRFDTAEYG 175 FGT+ VGRQ D L +IG ++ GG GV H LDR G R NNS+R+++ + Sbjct: 112 FGTVLVGRQNDPLNDIGGIASA----GGFGVPGTVHSKGLDRTDGQRLNNSIRYNSPNFN 167 Query: 176 GLRGSFYYGAGEVAGSTRSGQSLGVGGNFRRGDVGVGAAYFQSKLA-----SDALPARA- 229 GL S YG GE G G+S+G+G + G + +G YFQSK+ S + A+A Sbjct: 168 GLSFSGIYGFGEQVGRAVGGRSIGLGSQYVNGPLSLGLGYFQSKMGGGSDGSSDVNAKAA 227 Query: 230 ----------GDTELKTFTLGASYQAGPAKLFAAWSQIRRP------------------- 260 GDT LKT+TL A+YQ GPAK++ A+S +R P Sbjct: 228 CNGAGEKDHAGDTCLKTWTLAAAYQFGPAKVYGAFSHVRLPLAKLHTKVRKDNNFGAMYD 287 Query: 261 ----TQQPLSSSGLVAITSATR--ANVLDVGVDYALDSKLHLLASVIHDRADLSRAAGGA 314 T S + +I A + D+G+ Y L L L+++V H RA GA Sbjct: 288 AKTGTGYNPSDATAFSIGGANHKSSQTFDIGMSYQLMPSLTLMSAVQHTRAKFV----GA 343 Query: 315 TRGSTTQFNLGVDLLLSKRTDVYAMASRQQARDVLNPGIISAAYSSAPADDSSQNVLRVG 374 G Q NLG LSKRT YA+ ++ D+ N G+ + P D SQ + G Sbjct: 344 ASGRLLQLNLGAKYDLSKRTSAYALVRNLRSSDMYNVGL---SKDQEPGIDRSQTAISTG 400 Query: 375 LRHKF 379 L H F Sbjct: 401 LIHTF 405 >ref|YP_776652.1| porin [Burkholderia ambifaria AMMD] gb|ABI90318.1| porin, Gram-negative type [Burkholderia ambifaria AMMD] Length = 384 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 138/390 (35%), Positives = 198/390 (50%), Gaps = 54/390 (13%) Query: 24 AASAASSSSVTVYGVIDMSLVYTSKVGPDNGSRASL---DSGDAMASRIGLRGREELGDG 80 A +A + SSVT+YGVID + Y + NG L D G A SR GLRG E+LG G Sbjct: 15 AGTAHAQSSVTLYGVIDAGISYVNHSKTANGGSGKLFKYDDGVAQGSRWGLRGTEDLGGG 74 Query: 81 LAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLA-GRFGTLTVGRQTDYLEEI-GQQYTS 138 L AIF LE GF +G++ G +F R++ VGL+ +FGT+T+GRQ + +I G Y++ Sbjct: 75 LKAIFVLENGFNSGNGSIGQGGAIFGRQAYVGLSQSQFGTVTLGRQYSFSTDILGSNYST 134 Query: 139 FQIFGGG---GVRAAHFNSLDRITGARSNNSLRFDTAEYGGLR-GSFY------------ 182 GG G A H N +D++T +R NNS++F +A Y G G+ Y Sbjct: 135 ----GGNTVAGNYAYHVNDVDQLTSSRINNSVKFQSANYAGFTFGALYGFSNSTDFAGAA 190 Query: 183 -YGAGEVAGSTRSGQSLGVGGNFRRGDVGVGAAYFQSKLASDALPA--------RAGDT- 232 GA GS+R+ S GV N+ G +GAAY + S + PA G+ Sbjct: 191 GTGATNTGGSSRA-YSFGV--NYANGPFALGAAYTDIRFPSQSSPAFSTTIANISTGNIR 247 Query: 233 ELKTFTLGASYQAGPAKLFAAWSQIRRPTQQPLSSSGLVAITSATRANVLDVGVDYALDS 292 +L+T+ +G Y GPA +A W+ R P++ A S T N + G+ YA Sbjct: 248 DLRTYGVGGRYIFGPATAWALWT---RTQFTPVA-----AGASGTFYNAYEAGLKYAFTP 299 Query: 293 KLHLLASVIHDRADLSRAAGGATRGSTTQFNLGVDLLLSKRTDVYAMASRQQA--RDV-L 349 L A + A + GG+ Q NLG+D LSKRTDVY + Q+A +V Sbjct: 300 ALSAAAGYTYTNATQN---GGSAH--WNQGNLGLDYALSKRTDVYGLVVYQKASGNNVQA 354 Query: 350 NPGIISAAYSSAPADDSSQNVLRVGLRHKF 379 G ++ ++++ S+Q RVG+RHKF Sbjct: 355 QIGSSTSYFNTSGTGSSNQLAARVGIRHKF 384 >ref|ZP_02893072.1| porin Gram-negative type [Burkholderia ambifaria IOP40-10] gb|EDT01350.1| porin Gram-negative type [Burkholderia ambifaria IOP40-10] Length = 384 Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 134/387 (34%), Positives = 193/387 (49%), Gaps = 48/387 (12%) Query: 24 AASAASSSSVTVYGVIDMSLVYTSKVGPDNGSRASL---DSGDAMASRIGLRGREELGDG 80 A +A + SSVT+YGVID + Y + NG L D G A SR GLRG E+LG G Sbjct: 15 AGTAHAQSSVTLYGVIDAGISYVNHSKTANGGSGKLFKYDDGVAQGSRWGLRGTEDLGGG 74 Query: 81 LAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLA-GRFGTLTVGRQTDYLEEI-GQQYTS 138 L AIF LE GF +GA+ G +F R++ VGL+ +FGT+T+GRQ + +I G Y++ Sbjct: 75 LKAIFVLENGFNSGNGAIGQGGAIFGRQAYVGLSQSQFGTVTLGRQYSFSTDILGSNYST 134 Query: 139 FQIFGGG---GVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYG----------- 184 GG G A H N +D++T +R NNS++F +A Y G YG Sbjct: 135 ----GGNTVAGNYAYHVNDVDQLTSSRINNSVKFQSANYAGFTFGALYGFSNSTDFAGAA 190 Query: 185 AGEVAGSTRSGQSLGVGGNFRRGDVGVGAAYFQSKLASDALPA--------RAGDT-ELK 235 + S ++ G N+ G +GAAY + S + PA G+ +L+ Sbjct: 191 GTGTTNTGGSSRAYSFGVNYANGPFALGAAYTDIRFPSQSSPAFSTTIANISTGNIRDLR 250 Query: 236 TFTLGASYQAGPAKLFAAWSQIRRPTQQPLSSSGLVAITSATRANVLDVGVDYALDSKLH 295 T+ +G Y GPA +A W+ R P++ A S T N + GV YA L Sbjct: 251 TYGVGGRYIFGPATAWALWT---RTQFTPVA-----AGASGTFYNAYEAGVKYAFTPALS 302 Query: 296 LLASVIHDRADLSRAAGGATRGSTTQFNLGVDLLLSKRTDVYAMASRQQA--RDV-LNPG 352 A + A + GG+ + Q NLG+D LSKRTDVY + Q+A +V G Sbjct: 303 AAAGYTYTNATQN---GGSAHWN--QGNLGLDYALSKRTDVYGLVVYQKASGNNVQAQIG 357 Query: 353 IISAAYSSAPADDSSQNVLRVGLRHKF 379 ++ ++++ S+Q RVG+RHKF Sbjct: 358 SSTSYFNTSGTGSSNQLAARVGIRHKF 384 >ref|YP_370985.1| outer membrane protein (porin) [Burkholderia sp. 383] gb|ABB10341.1| outer membrane protein (porin) [Burkholderia sp. 383] Length = 383 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 135/394 (34%), Positives = 197/394 (50%), Gaps = 49/394 (12%) Query: 16 AALAQSPAAASAASSSSVTVYGVID--MSLVYTSKVGPDNGSRASLDSGDAMASRIGLRG 73 A LA + AA A SSVT+YGVID +S V SK +G D G A SR GLRG Sbjct: 9 AVLAATTGAAHA--QSSVTLYGVIDAGISYVNHSKTATGSGKMFKYDDGVAQGSRWGLRG 66 Query: 74 REELGDGLAAIFQLETGFAGDDGAMATPGTLFDRKSVVGLA-GRFGTLTVGRQTDYLEEI 132 E+LG GL AIF LE GF +G + G +F R++ VGL+ ++GT+T GRQ + ++ Sbjct: 67 TEDLGGGLKAIFVLENGFNSGNGTIGQGGAIFGRQAYVGLSQQQYGTVTFGRQYSFSTDV 126 Query: 133 -GQQYTSFQIFGGG---GVRAAHFNSLDRITGARSNNSLRFDTAEYGGLRGSFYYG---A 185 G Y++ GG G A H N +D++T +R NN+++F +A Y G YG + Sbjct: 127 LGSNYST----GGNTVAGNYAYHVNDIDQLTSSRINNAVKFQSANYSGFTFGALYGFSNS 182 Query: 186 GEVAGSTRSGQS--------LGVGGNFRRGDVGVGAAYFQSKLASDALPARAGDT----- 232 + AG+ SG S G N+ G +GAAY + S + PA + Sbjct: 183 TDFAGANGSGASNTGGSSRAYSFGLNYANGPFSLGAAYTDIRFPSQSTPAFSTSIANLAL 242 Query: 233 ----ELKTFTLGASYQAGPAKLFAAWSQIRRPTQQPLSSSGLVAITSATRANVLDVGVDY 288 +L+T+ +G Y GPA +A W+ R P++ A S T N + G+ Y Sbjct: 243 TNIRDLRTYGVGGRYVFGPATAWALWT---RTQFTPIA-----AGASGTFYNAYEAGLKY 294 Query: 289 ALDSKLHLLASVIHDRADLSRAAGGATRGSTTQFNLGVDLLLSKRTDVYAMASRQQA--R 346 A+ L A + A S ++ +G NL +D LSKRTDVY + Q+A Sbjct: 295 AITPALSAAAGYTYTNATQSGSSAHWNQG-----NLALDYALSKRTDVYGLVVYQKASGN 349 Query: 347 DV-LNPGIISAAYSSAPADDSSQNVLRVGLRHKF 379 +V G ++ ++++ S+Q RVG+RHKF Sbjct: 350 NVQAQIGSSTSYFNTSGTGASNQLAARVGIRHKF 383