BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0075.p (235 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776279.1| outer membrane channel lipoprotein [Herbaspi... 405 e-111 ref|NP_521851.1| putative outer membrane CHANEL lipoprotein [Ral... 152 3e-35 ref|YP_902031.1| outer membrane efflux protein [Pelobacter propi... 151 7e-35 emb|CBJ39919.1| putative Outer membrane efflux protein precursor... 150 1e-34 emb|CAQ57150.1| typeIsecretion system, outer membrane chanel lip... 148 8e-34 ref|YP_002258183.1| typeIsecretion system, outer membrane chanel... 146 2e-33 ref|ZP_00942881.1| Type I secretion outer membrane protein [Rals... 146 2e-33 emb|CCA87572.1| putative Outer membrane efflux protein precursor... 146 2e-33 gb|AEG70945.1| type I secretion outer membrane protein, tolc [Ra... 146 3e-33 ref|YP_003747520.1| Outer membrane efflux protein precursor [Ral... 145 7e-33 >ref|YP_003776279.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ64371.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] Length = 484 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/206 (100%), Positives = 206/206 (100%) Query: 1 MSDEAAIRKALAILLICLLAPVAPVAAADTESLRIGDPLLARPPDLITGRLLPGDDQRVE 60 MSDEAAIRKALAILLICLLAPVAPVAAADTESLRIGDPLLARPPDLITGRLLPGDDQRVE Sbjct: 1 MSDEAAIRKALAILLICLLAPVAPVAAADTESLRIGDPLLARPPDLITGRLLPGDDQRVE 60 Query: 61 CAASPYVAGKALSLADAIDQALCQQPQIQAAWAAIKLQAAQLGEARAGYLPTVTSGASKL 120 CAASPYVAGKALSLADAIDQALCQQPQIQAAWAAIKLQAAQLGEARAGYLPTVTSGASKL Sbjct: 61 CAASPYVAGKALSLADAIDQALCQQPQIQAAWAAIKLQAAQLGEARAGYLPTVTSGASKL 120 Query: 121 NSATQYEGGSGRRSLTTLYATLTWRLLDFGGRSANQRAADAMLQSALASHDAAVQKALAS 180 NSATQYEGGSGRRSLTTLYATLTWRLLDFGGRSANQRAADAMLQSALASHDAAVQKALAS Sbjct: 121 NSATQYEGGSGRRSLTTLYATLTWRLLDFGGRSANQRAADAMLQSALASHDAAVQKALAS 180 Query: 181 VVASYYEVQSSSASQQAREKSQQLAR 206 VVASYYEVQSSSASQQAREKSQQLAR Sbjct: 181 VVASYYEVQSSSASQQAREKSQQLAR 206 >ref|NP_521851.1| putative outer membrane CHANEL lipoprotein [Ralstonia solanacearum GMI1000] emb|CAD17441.1| probable typeIsecretion system, outer membrane chanel lipoprotein [Ralstonia solanacearum GMI1000] Length = 488 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 84/175 (48%), Positives = 119/175 (68%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C AS +A LSL++A+D LC PQ++AAWAA Sbjct: 39 VDDPLFARPPVLDTGAVLPSDAQPIPCPASGDLA-HPLSLSEAVDLGLCNNPQVKAAWAA 97 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEGGSGRRSLT---TLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T S +++ ++ S + T+Y L+WRL DFG Sbjct: 98 IKIQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANSTSNGHTVYLGLSWRLFDFGA 157 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN+ AA+ +L +A++ HDAA+QK LASVV +Y++ + A+ QAR ++ +LAR Sbjct: 158 RSANREAANLLLAAAISGHDAALQKVLASVVGAYFDALTQQAAMQARTEATRLAR 212 >ref|YP_902031.1| outer membrane efflux protein [Pelobacter propionicus DSM 2379] gb|ABK99973.1| outer membrane efflux protein [Pelobacter propionicus DSM 2379] Length = 495 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 90/198 (45%), Positives = 124/198 (62%), Gaps = 6/198 (3%) Query: 11 LAILLICLLAPVAPVAAADTESLRIGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGK 70 +AI I L A + P A D + DPL P + +G LPGD V C + +A Sbjct: 26 IAIASIALFASL-PALAFDPAA-PFDDPLRTLPGRIASGTTLPGDGGPVACPVTRDLAAP 83 Query: 71 ALSLADAIDQALCQQPQIQAAWAAIKLQAAQLGEARAGYLPTVTSGASKLNSATQYEGG- 129 LSL DA D ALC PQI+AAWAAIKLQ+A++G+ARA YLPT++ + + + Y G Sbjct: 84 -LSLIDAADLALCNNPQIKAAWAAIKLQSAEVGQARAAYLPTLSGTINFMRTHYSYPGSG 142 Query: 130 --SGRRSLTTLYATLTWRLLDFGGRSANQRAADAMLQSALASHDAAVQKALASVVASYYE 187 S TT+ ATL WRL DFGGR+AN+ +A+ ML +ALA HDAA+QK LA V+ SY++ Sbjct: 143 VASTTEDGTTINATLGWRLFDFGGRAANRESANKMLVAALAQHDAALQKKLADVIQSYFD 202 Query: 188 VQSSSASQQAREKSQQLA 205 ++ AS A+E+++ +A Sbjct: 203 AVTAQASLHAKEQNESIA 220 >emb|CBJ39919.1| putative Outer membrane efflux protein precursor [Ralstonia solanacearum CMR15] Length = 464 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C AS +A L+L++A+D LC PQ++AAWAA Sbjct: 15 VDDPLFARPPVLDTGAVLPSDAQPIPCPASGDLA-HPLALSEAVDLGLCNNPQVKAAWAA 73 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEGGSGRRSLT---TLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T+ S +++ ++ + + T+Y L+WRL DFG Sbjct: 74 IKIQAGAVGEARAAYLPTLTASLSAMHTRNEFPDRPEANTSSDGHTVYLGLSWRLFDFGA 133 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN+ AA+ +L +A++ HDAA+QK LASVV +Y++ + A+ QAR ++ +LAR Sbjct: 134 RSANREAANLLLAAAISGHDAALQKVLASVVGAYFDALTQQAAMQARTEATRLAR 188 >emb|CAQ57150.1| typeIsecretion system, outer membrane chanel lipoprotein [Ralstonia solanacearum MolK2] Length = 450 Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 80/175 (45%), Positives = 112/175 (64%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C A +A A+D LC PQ++AAWAA Sbjct: 1 MDDPLFARPPVLDTGAVLPSDAQPIPCPARGDLAAPLALAE-AVDLGLCNNPQVKAAWAA 59 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEG---GSGRRSLTTLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T S +++ ++ + T+Y L+WRL DFG Sbjct: 60 IKIQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANTSSDGHTVYLGLSWRLFDFGA 119 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN+ AA+ ML +A++ HDAA+QK LASVV +Y++ + A+ QAR ++ +LAR Sbjct: 120 RSANREAANLMLAAAISGHDAALQKVLASVVGAYFDALTQQAAMQARTEATRLAR 174 >ref|YP_002258183.1| typeIsecretion system, outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] emb|CAQ60078.1| typeIsecretion system, outer membrane chanel lipoprotein [Ralstonia solanacearum IPO1609] Length = 488 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 79/175 (45%), Positives = 112/175 (64%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C A +A A+D LC PQ++AAWAA Sbjct: 39 VDDPLFARPPVLDTGAVLPSDAQPIPCPARGDLAAPLALAE-AVDLGLCNNPQVKAAWAA 97 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEG---GSGRRSLTTLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T S +++ ++ + T+Y L+WRL DFG Sbjct: 98 IKIQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANTSSDGHTVYLGLSWRLFDFGA 157 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN+ AA+ ML +A++ HDAA+QK LA+VV +Y++ + A+ QAR ++ +LAR Sbjct: 158 RSANREAANLMLAAAISGHDAALQKVLAAVVGAYFDALTQQAAMQARTEATRLAR 212 >ref|ZP_00942881.1| Type I secretion outer membrane protein [Ralstonia solanacearum UW551] gb|EAP74635.1| Type I secretion outer membrane protein [Ralstonia solanacearum UW551] Length = 494 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/175 (46%), Positives = 117/175 (66%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C A +A L+LA+A+D LC PQ++AAWAA Sbjct: 45 VDDPLFARPPVLDTGAVLPSDAQPIPCPARGDLA-APLALAEAVDLGLCNNPQVKAAWAA 103 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEG---GSGRRSLTTLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T S +++ ++ + T+Y L+WRL DFG Sbjct: 104 IKIQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANTSSDGHTVYLGLSWRLFDFGA 163 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN+ AA+ ML +A++ HDAA+QK LA+VV +Y++ + A+ QAR ++ +LAR Sbjct: 164 RSANREAANLMLAAAISGHDAALQKVLAAVVGAYFDALTQQAAMQARTEATRLAR 218 >emb|CCA87572.1| putative Outer membrane efflux protein precursor [Ralstonia syzygii R24] Length = 494 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C A + L+L +A+D LC PQ++AAWAA Sbjct: 45 VDDPLFARPPVLDTGAVLPSDAQPIPCPARGDLTAP-LALGEAVDLGLCNNPQVKAAWAA 103 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEG---GSGRRSLTTLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T S + + ++ + S T+Y WRL DFG Sbjct: 104 IKIQAGAVGEARAAYLPTLTGSLSAMRTRNEFPERPEANSTSSGHTVYLGFNWRLFDFGA 163 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN++AAD +L +A++ HDAA+QK LASVV +Y++ + A+ QAR ++ +LAR Sbjct: 164 RSANRKAADLLLAAAISGHDAALQKVLASVVGAYFDALTQQAAMQARAEATRLAR 218 >gb|AEG70945.1| type I secretion outer membrane protein, tolc [Ralstonia solanacearum Po82] Length = 488 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/175 (45%), Positives = 112/175 (64%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C A +A A+D LC PQ++AAWAA Sbjct: 39 VDDPLFARPPVLDTGAVLPSDAQPIPCPARGDLAAPLALAE-AVDLGLCNNPQVKAAWAA 97 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEG---GSGRRSLTTLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T S +++ ++ + T+Y L+WRL DFG Sbjct: 98 IKIQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANTSSDGHTVYLGLSWRLFDFGA 157 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN+ AA+ ML +A++ HDAA+QK LA+VV +Y++ + A+ QAR ++ +LAR Sbjct: 158 RSANREAANLMLAAAISGHDAALQKVLAAVVGAYFDALTQQAAMQARAEATRLAR 212 >ref|YP_003747520.1| Outer membrane efflux protein precursor [Ralstonia solanacearum CFBP2957] emb|CBJ53103.1| putative Outer membrane efflux protein precursor [Ralstonia solanacearum CFBP2957] Length = 494 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 4/175 (2%) Query: 35 IGDPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAA 94 + DPL ARPP L TG +LP D Q + C A +A L+LA+A+D LC PQ++A WAA Sbjct: 45 VDDPLFARPPVLDTGAVLPSDAQPIPCPARGDLA-APLALAEAVDLGLCNNPQVKATWAA 103 Query: 95 IKLQAAQLGEARAGYLPTVTSGASKLNSATQYEG---GSGRRSLTTLYATLTWRLLDFGG 151 IK+QA +GEARA YLPT+T S +++ ++ + T+Y L+WRL DFG Sbjct: 104 IKIQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANTSSDGHTVYLGLSWRLFDFGA 163 Query: 152 RSANQRAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLAR 206 RSAN+ AA+ ML +A++ HDAA+QK LA+VV +Y++ + A+ QAR ++ +LAR Sbjct: 164 RSANREAANLMLAAAISGHDAALQKVLAAVVGAYFDALTQQAAMQARAEATRLAR 218