BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0059.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776197.1| TRAP-type C4-dicarboxylate-binding periplasm... 704 0.0 ref|YP_003774270.1| TRAP-type C4-dicarboxylate transport system ... 521 e-146 ref|ZP_08274273.1| TRAP-type C4-dicarboxylate transport system, ... 504 e-141 ref|YP_003448127.1| C4-dicarboxylate-binding periplasmic protein... 484 e-135 ref|YP_420258.1| TRAP-type C4-dicarboxylate transport system [Ma... 476 e-132 ref|YP_002288294.1| C4-dicarboxylate-binding periplasmic protein... 472 e-131 ref|YP_001633385.1| C4-dicarboxylate-binding periplasmic protein... 468 e-130 ref|YP_428759.1| TRAP dicarboxylate transporter subunit DctP [Rh... 466 e-129 gb|AEO50223.1| TRAP dicarboxylate transporter subunit DctP [Rhod... 466 e-129 ref|ZP_03582499.1| C4-dicarboxylate-binding periplasmic protein ... 463 e-128 >ref|YP_003776197.1| TRAP-type C4-dicarboxylate-binding periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64289.1| TRAP-type C4-dicarboxylate-binding periplasmic protein [Herbaspirillum seropedicae SmR1] Length = 344 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/344 (99%), Positives = 342/344 (99%) Query: 1 MTILPLRTALAACALVTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAE 60 MTILPLRTALAACA VTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAE Sbjct: 1 MTILPLRTALAACAFVTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAE 60 Query: 61 KATQGRVKVEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFP 120 KATQGRVKVEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFP Sbjct: 61 KATQGRVKVEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFP 120 Query: 121 DKAVLKRVTEGPIGQGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQS 180 DKAVLKRVTEGPIGQGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQS Sbjct: 121 DKAVLKRVTEGPIGQGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQS 180 Query: 181 SKVLDEQFRALKANPQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHG 240 SKVLDEQFRALKANPQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHG Sbjct: 181 SKVLDEQFRALKANPQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHG 240 Query: 241 YIGYAVIVNKKFWEALPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYT 300 YIGYAVIVNKKFWEALP DIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYT Sbjct: 241 YIGYAVIVNKKFWEALPADIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYT 300 Query: 301 LSEQEKAEWRRALLPVHKSMAARVGADLIEAIYKESEAAGVKMN 344 LSEQEKAEWRRALLPVHKSMAARVGADLIEAIYKESEAAGVKMN Sbjct: 301 LSEQEKAEWRRALLPVHKSMAARVGADLIEAIYKESEAAGVKMN 344 >ref|YP_003774270.1| TRAP-type C4-dicarboxylate transport system periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62362.1| TRAP-type C4-dicarboxylate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust. Identities = 254/342 (74%), Positives = 289/342 (84%), Gaps = 8/342 (2%) Query: 1 MTILPLRTALAACALVTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAE 60 M + + A+ A A+V+ A AQQP I+IKFSHVVANDTPKGK AERFKELAE Sbjct: 1 MKLKSILLAMTAAAIVSTN-----AFAQQP---IVIKFSHVVANDTPKGKAAERFKELAE 52 Query: 61 KATQGRVKVEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFP 120 KAT+GRVK+EVYPNSTLYKDKEELEALQLG+VQMLAPSLAKFGPLG +EFEVFDLPYIFP Sbjct: 53 KATKGRVKIEVYPNSTLYKDKEELEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFP 112 Query: 121 DKAVLKRVTEGPIGQGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQS 180 K VL RVTEGPIG+ LF+KLE KGI GLAYWDNG KVM+AN+PLH ADFR LKMRIQS Sbjct: 113 TKEVLYRVTEGPIGKDLFKKLEPKGITGLAYWDNGFKVMSANKPLHHPADFRGLKMRIQS 172 Query: 181 SKVLDEQFRALKANPQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHG 240 SKVLD Q RAL ANPQVLAFSEVYQA+QTGVVDG+EN PSN+YTQKMHEVQ ++TVS+HG Sbjct: 173 SKVLDAQMRALGANPQVLAFSEVYQALQTGVVDGTENPPSNLYTQKMHEVQKHVTVSNHG 232 Query: 241 YIGYAVIVNKKFWEALPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYT 300 Y+GYAVIVNKKFW+ LP DIR+QLE AMK AT YAN IAQ+END ALAA++ +GKT VY Sbjct: 233 YLGYAVIVNKKFWDGLPSDIRTQLEGAMKDATKYANAIAQQENDAALAAVEKTGKTTVYR 292 Query: 301 LSEQEKAEWRRALLPVHKSMAARVGADLIEAIYKESEAAGVK 342 L++ EKAEWR+ALLPV + MA+R+G DLI+A+ KES A G K Sbjct: 293 LTDAEKAEWRKALLPVQQQMASRIGKDLIDAVNKESAALGQK 334 >ref|ZP_08274273.1| TRAP-type C4-dicarboxylate transport system, periplasmic component [Oxalobacteraceae bacterium IMCC9480] gb|EGF32246.1| TRAP-type C4-dicarboxylate transport system, periplasmic component [Oxalobacteraceae bacterium IMCC9480] Length = 337 Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust. Identities = 238/312 (76%), Positives = 270/312 (86%) Query: 31 QQPIIIKFSHVVANDTPKGKGAERFKELAEKATQGRVKVEVYPNSTLYKDKEELEALQLG 90 Q PI+IKFSHVVANDTPKGK AERFKEL EK +GRVKVE+YPNSTLYKDKEELEALQLG Sbjct: 26 QTPIVIKFSHVVANDTPKGKAAERFKELVEKNLKGRVKVELYPNSTLYKDKEELEALQLG 85 Query: 91 SVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKAVLKRVTEGPIGQGLFQKLEGKGIKGLA 150 +VQMLAPSLAKFGPLG +EFE+FDLPYIFP K VL RVTEGPIG+ LF+KLE KGI GLA Sbjct: 86 AVQMLAPSLAKFGPLGVKEFELFDLPYIFPGKDVLYRVTEGPIGKDLFKKLESKGITGLA 145 Query: 151 YWDNGMKVMTANRPLHKVADFRALKMRIQSSKVLDEQFRALKANPQVLAFSEVYQAMQTG 210 YWDNG KVM+AN+PL ADF+ LKMRIQSSKVLD + RAL ANPQVLAFSEVYQA+QTG Sbjct: 146 YWDNGFKVMSANKPLKTPADFKGLKMRIQSSKVLDAEMRALGANPQVLAFSEVYQALQTG 205 Query: 211 VVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIGYAVIVNKKFWEALPGDIRSQLEAAMKQ 270 VVDG+EN PSN+YTQKMHEVQSN+TVS+HGY+GYAVIVNKKFW+ LP DIR+ LEAAMK Sbjct: 206 VVDGTENPPSNLYTQKMHEVQSNVTVSNHGYLGYAVIVNKKFWDGLPADIRTGLEAAMKD 265 Query: 271 ATLYANTIAQKENDDALAAIKASGKTRVYTLSEQEKAEWRRALLPVHKSMAARVGADLIE 330 AT YAN IAQ+END A+ A++ SGKT VY L+++EKAEWR+ALLPV K M +R+G DLI Sbjct: 266 ATKYANAIAQQENDKAMEAVRKSGKTEVYVLNDKEKAEWRKALLPVQKDMESRIGKDLIT 325 Query: 331 AIYKESEAAGVK 342 A+ KE+ G K Sbjct: 326 AVGKEATTLGYK 337 >ref|YP_003448127.1| C4-dicarboxylate-binding periplasmic protein [Azospirillum sp. B510] dbj|BAI71583.1| C4-dicarboxylate-binding periplasmic protein [Azospirillum sp. B510] Length = 340 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 239/335 (71%), Positives = 274/335 (81%), Gaps = 1/335 (0%) Query: 10 LAACALVTLGLPQPAALAQQ-PQQPIIIKFSHVVANDTPKGKGAERFKELAEKATQGRVK 68 L A V + P AL+ Q I+IKFSHVVA +TPKGKGAE+FKELAE+ T G+VK Sbjct: 6 LLCAAAVGCVMSAPMALSTAWAQDQIVIKFSHVVAPETPKGKGAEKFKELAERLTAGKVK 65 Query: 69 VEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKAVLKRV 128 VEVYPNS LYKDKEELEALQLG+VQMLAPSLAKFGPLGA+EFEVFDLPYIFP K VL+RV Sbjct: 66 VEVYPNSQLYKDKEELEALQLGAVQMLAPSLAKFGPLGAKEFEVFDLPYIFPSKEVLQRV 125 Query: 129 TEGPIGQGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQSSKVLDEQF 188 T+G IG+ LF+KLE KGI GLAYWDNG K+M+AN+PL K D + LKMRIQSSKVLD Q Sbjct: 126 TKGEIGKSLFRKLESKGIVGLAYWDNGFKIMSANKPLIKPEDVKGLKMRIQSSKVLDAQM 185 Query: 189 RALKANPQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIGYAVIV 248 RAL A PQV+AFSEVYQA+QTGVVDG+EN PSN+YTQKMHEVQ N T++DHGY+GYAVIV Sbjct: 186 RALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKNATLTDHGYLGYAVIV 245 Query: 249 NKKFWEALPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYTLSEQEKAE 308 NKKFWE LP D+R +LE AMK+AT YAN IAQ END ALA +KASGKT ++ +++E+ Sbjct: 246 NKKFWEGLPADVRGKLEEAMKEATDYANDIAQNENDVALAQMKASGKTEFHSQTKEEREA 305 Query: 309 WRRALLPVHKSMAARVGADLIEAIYKESEAAGVKM 343 W +AL PVHK ARVG DLIEAIYKES AAG KM Sbjct: 306 WIKALKPVHKDAEARVGKDLIEAIYKESAAAGFKM 340 >ref|YP_420258.1| TRAP-type C4-dicarboxylate transport system [Magnetospirillum magneticum AMB-1] dbj|BAE49699.1| TRAP-type C4-dicarboxylate transport system [Magnetospirillum magneticum AMB-1] Length = 337 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 230/334 (68%), Positives = 271/334 (81%), Gaps = 7/334 (2%) Query: 9 ALAACALVTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAEKATQGRVK 68 A+AAC L +A+AQQ QPI+IKFSHVVA DTPKGKGAE FK+LAE+ T+GRVK Sbjct: 10 AIAACVLAG------SAMAQQ-AQPIVIKFSHVVAPDTPKGKGAEYFKKLAEERTKGRVK 62 Query: 69 VEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKAVLKRV 128 VEVYPNS LYKDKEE+EALQLG+VQMLAPSLAKFGPLG +EFEVFDLPYIFP K VL+ V Sbjct: 63 VEVYPNSQLYKDKEEMEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPSKDVLRSV 122 Query: 129 TEGPIGQGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQSSKVLDEQF 188 T GP+G L +KLEGKGI GLAYWDNG K+M+AN+P+ +D + +KMRIQSSKVLD + Sbjct: 123 TGGPVGASLLKKLEGKGIIGLAYWDNGFKIMSANKPIKAPSDLKGVKMRIQSSKVLDAEM 182 Query: 189 RALKANPQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIGYAVIV 248 RAL A PQV+AFSEVYQA+QTGVVDG+EN PSN+YTQKMHEVQ + T+++HGY+GYAVIV Sbjct: 183 RALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATMTNHGYLGYAVIV 242 Query: 249 NKKFWEALPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYTLSEQEKAE 308 NKKFWE LP DIR+ LE AM +A+++AN IAQ ENDDA+ A+KASGKT + S E Sbjct: 243 NKKFWEGLPADIRATLEGAMSEASVFANAIAQTENDDAVKAMKASGKTEFHDPSAAEIEA 302 Query: 309 WRRALLPVHKSMAARVGADLIEAIYKESEAAGVK 342 WR+ALLPVHK M RVG DLIE+ YKE+ G K Sbjct: 303 WRKALLPVHKDMEGRVGKDLIESFYKEAAKFGFK 336 >ref|YP_002288294.1| C4-dicarboxylate-binding periplasmic protein [Oligotropha carboxidovorans OM5] ref|YP_004633613.1| C4-dicarboxylate-binding periplasmic protein DctP [Oligotropha carboxidovorans OM5] gb|ACI92429.1| C4-dicarboxylate-binding periplasmic protein [Oligotropha carboxidovorans OM5] gb|AEI03795.1| C4-dicarboxylate-binding periplasmic protein DctP [Oligotropha carboxidovorans OM4] gb|AEI07372.1| C4-dicarboxylate-binding periplasmic protein DctP [Oligotropha carboxidovorans OM5] Length = 339 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/310 (72%), Positives = 259/310 (83%) Query: 31 QQPIIIKFSHVVANDTPKGKGAERFKELAEKATQGRVKVEVYPNSTLYKDKEELEALQLG 90 Q P++IKFSHVVA +TPKGKGAE+FKELAEK T G+VKVEVYPNS LYKDKEE+EALQLG Sbjct: 29 QSPVVIKFSHVVAPETPKGKGAEKFKELAEKYTNGKVKVEVYPNSQLYKDKEEVEALQLG 88 Query: 91 SVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKAVLKRVTEGPIGQGLFQKLEGKGIKGLA 150 +VQMLAPSLAKFGPLG +EFEVFD+PYI PDKA LKRVT G +G+ L KLE KGIKGLA Sbjct: 89 AVQMLAPSLAKFGPLGVKEFEVFDIPYIMPDKAALKRVTHGEVGKKLLAKLEPKGIKGLA 148 Query: 151 YWDNGMKVMTANRPLHKVADFRALKMRIQSSKVLDEQFRALKANPQVLAFSEVYQAMQTG 210 YWDNG K+M+ANRPLHK DFR LKMRIQSSKVL+ Q RAL A PQV+AFSEVYQA+QTG Sbjct: 149 YWDNGFKIMSANRPLHKPEDFRGLKMRIQSSKVLEAQMRALGAIPQVMAFSEVYQALQTG 208 Query: 211 VVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIGYAVIVNKKFWEALPGDIRSQLEAAMKQ 270 VVDG+EN PSN+YTQKM+EVQ + T+S+HGY+GYAVIVNKKFWE LP D+R QLE AM + Sbjct: 209 VVDGTENPPSNMYTQKMNEVQKHATLSNHGYLGYAVIVNKKFWEGLPDDVRGQLEKAMAE 268 Query: 271 ATLYANTIAQKENDDALAAIKASGKTRVYTLSEQEKAEWRRALLPVHKSMAARVGADLIE 330 AT YAN IAQKENDDALAA+K +G T YTL+ +E A WR+AL PV + RVG DLI Sbjct: 269 ATDYANDIAQKENDDALAAMKKAGTTNFYTLTAEETAAWRKALDPVADEIGNRVGKDLIA 328 Query: 331 AIYKESEAAG 340 KE+ A+G Sbjct: 329 EFRKEAAASG 338 >ref|YP_001633385.1| C4-dicarboxylate-binding periplasmic protein precursor [Bordetella petrii DSM 12804] emb|CAP45118.1| C4-dicarboxylate-binding periplasmic protein precursor [Bordetella petrii] Length = 334 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 228/333 (68%), Positives = 266/333 (79%), Gaps = 3/333 (0%) Query: 4 LPLRTALAACALVTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAEKAT 63 + +R +A L T G+ A A++P IIIKFSHVVA DTPKGK AE FK+LAE+ T Sbjct: 1 MRMRFLIAGLCLTTAGITGTALAAEEP---IIIKFSHVVATDTPKGKAAEEFKKLAEERT 57 Query: 64 QGRVKVEVYPNSTLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKA 123 GRVKVEVYPNS LYKDKEELEALQLGSVQMLAPSLAKFGPLG REFEVFDLPY+F Sbjct: 58 HGRVKVEVYPNSQLYKDKEELEALQLGSVQMLAPSLAKFGPLGVREFEVFDLPYLFDSYD 117 Query: 124 VLKRVTEGPIGQGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQSSKV 183 L +VT GP+G+ L KL+ KGI GLA+WDNG KVMT N+PL + ADFR KMRIQSSKV Sbjct: 118 DLHKVTAGPVGKQLMAKLDSKGIIGLAFWDNGFKVMTDNKPLREPADFRGQKMRIQSSKV 177 Query: 184 LDEQFRALKANPQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIG 243 LD QFRAL A PQV+AFSEVYQA+QTGVVDG+ENTPSNVYTQ+M+EVQ LT+S+HGYIG Sbjct: 178 LDAQFRALGAIPQVMAFSEVYQALQTGVVDGTENTPSNVYTQRMNEVQKYLTLSNHGYIG 237 Query: 244 YAVIVNKKFWEALPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYTLSE 303 YAVIVNKKFWE LP DIR+ LE AM+ AT Y N IA+KENDDAL IKA+GKT TL+ Sbjct: 238 YAVIVNKKFWEGLPADIRTTLEGAMRDATTYGNEIAKKENDDALEKIKAAGKTEFITLTP 297 Query: 304 QEKAEWRRALLPVHKSMAARVGADLIEAIYKES 336 ++KA+W++AL VHK +R+G DLI+AIY+ + Sbjct: 298 EQKADWKKALSKVHKQQESRIGKDLIQAIYQAT 330 >ref|YP_428759.1| TRAP dicarboxylate transporter subunit DctP [Rhodospirillum rubrum ATCC 11170] gb|ABC24472.1| TRAP dicarboxylate transporter- DctP subunit [Rhodospirillum rubrum ATCC 11170] Length = 331 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 226/322 (70%), Positives = 262/322 (81%) Query: 16 VTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAEKATQGRVKVEVYPNS 75 + LG A AQ +PI+IKFSHVVA DTPKGK AE FK+LAE+ T GRVKVEVYPNS Sbjct: 9 LILGGVMIAGGAQAADEPIVIKFSHVVAPDTPKGKAAEMFKKLAEEGTAGRVKVEVYPNS 68 Query: 76 TLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKAVLKRVTEGPIGQ 135 LYKDKEELEALQLG+VQMLAPSLAKFGPLG +EFEVFDLPYIFP K VL+ VT+GPIG Sbjct: 69 QLYKDKEELEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRAVTDGPIGA 128 Query: 136 GLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQSSKVLDEQFRALKANP 195 L +KLEG+GIKGLAYWDNG K+ +AN+PL K D + +KMRIQSSKVLD + RAL A P Sbjct: 129 SLLKKLEGRGIKGLAYWDNGFKIFSANKPLLKPDDLKGVKMRIQSSKVLDAEMRALGALP 188 Query: 196 QVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIGYAVIVNKKFWEA 255 QV+AFSEVYQA+QTGVVDG+EN PSN+YTQKMHEVQ + T+++HGY+GYAVIVNKKFWE Sbjct: 189 QVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVIVNKKFWEG 248 Query: 256 LPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYTLSEQEKAEWRRALLP 315 LP DIR+ LE AM +T +AN IAQ+ENDD+LAA+KASGKT + SE E W+ ALLP Sbjct: 249 LPADIRAPLETAMADSTKFANAIAQQENDDSLAAMKASGKTEFHMPSEDELKAWQDALLP 308 Query: 316 VHKSMAARVGADLIEAIYKESE 337 VHK M RVG DLIE+IY S+ Sbjct: 309 VHKEMEGRVGKDLIESIYAVSK 330 >gb|AEO50223.1| TRAP dicarboxylate transporter subunit DctP [Rhodospirillum rubrum F11] Length = 325 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 226/322 (70%), Positives = 262/322 (81%) Query: 16 VTLGLPQPAALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAEKATQGRVKVEVYPNS 75 + LG A AQ +PI+IKFSHVVA DTPKGK AE FK+LAE+ T GRVKVEVYPNS Sbjct: 3 LILGGVMIAGGAQAADEPIVIKFSHVVAPDTPKGKAAEMFKKLAEEGTAGRVKVEVYPNS 62 Query: 76 TLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKAVLKRVTEGPIGQ 135 LYKDKEELEALQLG+VQMLAPSLAKFGPLG +EFEVFDLPYIFP K VL+ VT+GPIG Sbjct: 63 QLYKDKEELEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRAVTDGPIGA 122 Query: 136 GLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQSSKVLDEQFRALKANP 195 L +KLEG+GIKGLAYWDNG K+ +AN+PL K D + +KMRIQSSKVLD + RAL A P Sbjct: 123 SLLKKLEGRGIKGLAYWDNGFKIFSANKPLLKPDDLKGVKMRIQSSKVLDAEMRALGALP 182 Query: 196 QVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIGYAVIVNKKFWEA 255 QV+AFSEVYQA+QTGVVDG+EN PSN+YTQKMHEVQ + T+++HGY+GYAVIVNKKFWE Sbjct: 183 QVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVIVNKKFWEG 242 Query: 256 LPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYTLSEQEKAEWRRALLP 315 LP DIR+ LE AM +T +AN IAQ+ENDD+LAA+KASGKT + SE E W+ ALLP Sbjct: 243 LPADIRAPLETAMADSTKFANAIAQQENDDSLAAMKASGKTEFHMPSEDELKAWQDALLP 302 Query: 316 VHKSMAARVGADLIEAIYKESE 337 VHK M RVG DLIE+IY S+ Sbjct: 303 VHKEMEGRVGKDLIESIYAVSK 324 >ref|ZP_03582499.1| C4-dicarboxylate-binding periplasmic protein [Burkholderia multivorans CGD1] gb|EEE02672.1| C4-dicarboxylate-binding periplasmic protein [Burkholderia multivorans CGD1] Length = 331 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 221/322 (68%), Positives = 261/322 (81%), Gaps = 1/322 (0%) Query: 16 VTLGLPQPA-ALAQQPQQPIIIKFSHVVANDTPKGKGAERFKELAEKATQGRVKVEVYPN 74 V GL A AL QQPI+IKFSHVVA DTPKGK A+ FK+LAE T GRVKVEVYPN Sbjct: 6 VVTGLCLSAFALTAAAQQPIVIKFSHVVAADTPKGKAADYFKKLAETRTNGRVKVEVYPN 65 Query: 75 STLYKDKEELEALQLGSVQMLAPSLAKFGPLGAREFEVFDLPYIFPDKAVLKRVTEGPIG 134 S LYKDKEELEALQLGSVQMLAPSLAKFGPLGA+EFE+FDLPY+F L +VT+GP+G Sbjct: 66 SQLYKDKEELEALQLGSVQMLAPSLAKFGPLGAKEFELFDLPYLFDSYDALHKVTDGPVG 125 Query: 135 QGLFQKLEGKGIKGLAYWDNGMKVMTANRPLHKVADFRALKMRIQSSKVLDEQFRALKAN 194 + L KLE KGI GLAYWDNG KVM+ANRPL + ADFR LKMRIQSSKVLD QFRAL A Sbjct: 126 KRLMAKLESKGITGLAYWDNGFKVMSANRPLREPADFRGLKMRIQSSKVLDAQFRALNAI 185 Query: 195 PQVLAFSEVYQAMQTGVVDGSENTPSNVYTQKMHEVQSNLTVSDHGYIGYAVIVNKKFWE 254 PQV+AFSEVYQ +QTGVVDG+ENTPSN+YTQ+M+EVQ +TVS+HGYIGYAVIVN+KFW Sbjct: 186 PQVMAFSEVYQGLQTGVVDGTENTPSNLYTQRMNEVQKYVTVSNHGYIGYAVIVNRKFWS 245 Query: 255 ALPGDIRSQLEAAMKQATLYANTIAQKENDDALAAIKASGKTRVYTLSEQEKAEWRRALL 314 LP D+R+ LE AM+ AT YAN IA++ENDDALA IKA+GKT + +L+ + A+W++AL Sbjct: 246 GLPDDVRTALEGAMRDATRYANDIAKRENDDALAKIKATGKTELISLTPAQTADWKKALS 305 Query: 315 PVHKSMAARVGADLIEAIYKES 336 VH+ R+GADL+ +Y+ + Sbjct: 306 KVHRDQEQRIGADLVRDVYRAT 327