BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0054.p         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776192.1| hypothetical protein Hsero_2789 [Herbaspiril...   328   1e-88
ref|YP_001861684.1| hypothetical protein Bphy_5563 [Burkholderia...    69   2e-10
ref|ZP_03264306.1| hypothetical protein BH160DRAFT_0582 [Burkhol...    67   9e-10
ref|YP_002909011.1| hypothetical protein bglu_2g14170 [Burkholde...    67   1e-09
ref|YP_001888991.1| hypothetical protein Bphyt_5262 [Burkholderi...    65   3e-09

>ref|YP_003776192.1| hypothetical protein Hsero_2789 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64284.1| hypothetical protein Hsero_2789 [Herbaspirillum seropedicae SmR1]
          Length = 174

 Score =  328 bits (842), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MTLIRLKNARSWRPQGFRPLYVSAFGFIAAFGLRYALAPFVEESLSMLFFAVNCIVMSYL 60
           MTLIRLKNARSWRPQGFRPLYVSAFGFIAAFGLRYALAPFVEESLSMLFFAVNCIVMSYL
Sbjct: 14  MTLIRLKNARSWRPQGFRPLYVSAFGFIAAFGLRYALAPFVEESLSMLFFAVNCIVMSYL 73

Query: 61  FGCFYALGLLAVSIPTAMFFFRKPFYTMDGLNDKDLFLILVYTVIVATASFIIEWLQRER 120
           FGCFYALGLLAVSIPTAMFFFRKPFYTMDGLNDKDLFLILVYTVIVATASFIIEWLQRER
Sbjct: 74  FGCFYALGLLAVSIPTAMFFFRKPFYTMDGLNDKDLFLILVYTVIVATASFIIEWLQRER 133

Query: 121 YAAVLQQRVSETRYRLLIESDQARRAEYAKQFEASNPSEAS 161
           YAAVLQQRVSETRYRLLIESDQARRAEYAKQFEASNPSEAS
Sbjct: 134 YAAVLQQRVSETRYRLLIESDQARRAEYAKQFEASNPSEAS 174


>ref|YP_001861684.1| hypothetical protein Bphy_5563 [Burkholderia phymatum STM815]
 gb|ACC74638.1| hypothetical protein Bphy_5563 [Burkholderia phymatum STM815]
          Length = 280

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 71/141 (50%)

Query: 4   IRLKNARSWRPQGFRPLYVSAFGFIAAFGLRYALAPFVEESLSMLFFAVNCIVMSYLFGC 63
           ++++NAR W P+G R    +      A G+R  L P +   +    FA+  +++ Y FG 
Sbjct: 1   MQVQNARRWAPRGSRRWIAAIAALFMASGVRLLLHPLLGPVMPGTAFAIAAVLIEYYFGL 60

Query: 64  FYALGLLAVSIPTAMFFFRKPFYTMDGLNDKDLFLILVYTVIVATASFIIEWLQRERYAA 123
             AL ++   +  A + F  P+  +  +N  D+  ++ Y ++      +IE L+R ++ A
Sbjct: 61  APALTVMLAGLCIADYLFVPPYAVVSVINRSDVLFVVSYPLVALVVITLIERLRRAQFRA 120

Query: 124 VLQQRVSETRYRLLIESDQAR 144
            L   V+++RY +L+  D  R
Sbjct: 121 ELVSSVAQSRYEMLLRHDNDR 141


>ref|ZP_03264306.1| hypothetical protein BH160DRAFT_0582 [Burkholderia sp. H160]
 gb|EEA04150.1| hypothetical protein BH160DRAFT_0582 [Burkholderia sp. H160]
          Length = 259

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 73/141 (51%)

Query: 4   IRLKNARSWRPQGFRPLYVSAFGFIAAFGLRYALAPFVEESLSMLFFAVNCIVMSYLFGC 63
           ++++NAR+W P+G R   ++A     A  +R+AL P +   L    F +   ++ Y  G 
Sbjct: 1   MKVRNARNWGPRGARRWCLAAGALAVASTIRFALHPVLGPMLPGTTFFIAASLVEYYLGL 60

Query: 64  FYALGLLAVSIPTAMFFFRKPFYTMDGLNDKDLFLILVYTVIVATASFIIEWLQRERYAA 123
             AL ++ +    A + F  P+  +  L+  D+ L++ + ++      +IE L+RE+  A
Sbjct: 61  APALTVMVLGSCIADYMFVPPYNDISFLDQSDVVLLVAHPLVTLIVITLIERLRREQARA 120

Query: 124 VLQQRVSETRYRLLIESDQAR 144
            L   V+++RY +L+  D  R
Sbjct: 121 KLIASVAQSRYEMLLRQDNER 141


>ref|YP_002909011.1| hypothetical protein bglu_2g14170 [Burkholderia glumae BGR1]
 gb|ACR31776.1| Hypothetical protein bglu_2g14170 [Burkholderia glumae BGR1]
          Length = 263

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 4   IRLKNARSWRPQGFRPLYVSAFGFIAAFGLRYALAPFVEESLSMLFFAVNCIVMSYLFGC 63
           ++++NA  W P G R    +A   + A  +R AL P +   +    FA+  +++ Y  G 
Sbjct: 1   MKVRNASLWAPAGMRRWVYAAGALVLAIAVRLALHPLLGPVMPGTAFAIMAVLVEYYLGL 60

Query: 64  FYALGLLAVSIPTAMFFFRKPFYTMD---GLNDKDLFLILVYTVIVATASFIIEWLQRER 120
             AL ++  ++P A F F  P+ ++D     +  D+ L++ Y ++      ++E L+R +
Sbjct: 61  APALVVMFSALPIADFLFVPPYASLDEFLTFDRGDIVLLVSYPLVTLLVISLVERLRRAQ 120

Query: 121 YAAVLQQRVSETRYRLLIESDQAR 144
           + A L   V+++RY +L+  D  R
Sbjct: 121 FRARLITSVAQSRYEMLLRQDNDR 144


>ref|YP_001888991.1| hypothetical protein Bphyt_5262 [Burkholderia phytofirmans PsJN]
 gb|ACD19621.1| hypothetical protein Bphyt_5262 [Burkholderia phytofirmans PsJN]
          Length = 256

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 71/141 (50%)

Query: 4   IRLKNARSWRPQGFRPLYVSAFGFIAAFGLRYALAPFVEESLSMLFFAVNCIVMSYLFGC 63
           + ++NAR W P+G R    +A     A G+R  L PF+   L    F +   ++ Y FG 
Sbjct: 1   MEVQNARRWAPRGTRAWLAAAAALAIASGVRLLLHPFIGPFLPGSAFCIAASLVEYFFGL 60

Query: 64  FYALGLLAVSIPTAMFFFRKPFYTMDGLNDKDLFLILVYTVIVATASFIIEWLQRERYAA 123
             AL ++ + +  A + F  P+  +   +  DL L++ Y ++      +IE L+R ++ A
Sbjct: 61  APALTVMLLGLCIADYLFVPPYADITVFDRADLALVISYPLVTLLVIVLIERLRRSQFRA 120

Query: 124 VLQQRVSETRYRLLIESDQAR 144
            L   V+++RY +L+  D  R
Sbjct: 121 ELIASVAQSRYEMLLRHDNER 141