BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0052.p (203 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776190.1| transmembrane protein [Herbaspirillum serope... 402 e-110 ref|YP_004753770.1| hypothetical protein CFU_3122 [Collimonas fu... 168 5e-40 ref|YP_001100489.1| putative signal peptide [Herminiimonas arsen... 132 2e-29 ref|ZP_08276001.1| putative outer membrane lipoprotein [Oxalobac... 121 5e-26 ref|YP_001352949.1| hypothetical protein mma_1259 [Janthinobacte... 110 1e-22 ref|YP_003604394.1| 17 kDa surface antigen [Burkholderia sp. CCG... 105 4e-21 ref|ZP_06843980.1| 17 kDa surface antigen [Burkholderia sp. Ch1-... 101 7e-20 gb|EGW61107.1| hypothetical protein DsuiDRAFT_02059 [Dechlorosom... 100 2e-19 ref|ZP_07675889.1| surface antigen family protein [Ralstonia sp.... 99 4e-19 ref|YP_002980929.1| 17 kDa surface antigen [Ralstonia pickettii ... 99 4e-19 >ref|YP_003776190.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64282.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 203 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 203/203 (100%), Positives = 203/203 (100%) Query: 1 METNNAIVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQLAAVEQNA 60 METNNAIVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQLAAVEQNA Sbjct: 1 METNNAIVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQLAAVEQNA 60 Query: 61 GPMNPQQAPATRLAPQQAAYPSQSAEAPRAAAVCSSCGEVVAVRAVQHTPQTSGVGIAGG 120 GPMNPQQAPATRLAPQQAAYPSQSAEAPRAAAVCSSCGEVVAVRAVQHTPQTSGVGIAGG Sbjct: 61 GPMNPQQAPATRLAPQQAAYPSQSAEAPRAAAVCSSCGEVVAVRAVQHTPQTSGVGIAGG 120 Query: 121 AVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMVEKNVRTTTTYVVDVRMDNGKSRSFP 180 AVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMVEKNVRTTTTYVVDVRMDNGKSRSFP Sbjct: 121 AVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMVEKNVRTTTTYVVDVRMDNGKSRSFP 180 Query: 181 QSGANWRVGDQVRVVNGHLESRG 203 QSGANWRVGDQVRVVNGHLESRG Sbjct: 181 QSGANWRVGDQVRVVNGHLESRG 203 >ref|YP_004753770.1| hypothetical protein CFU_3122 [Collimonas fungivorans Ter331] gb|AEK62947.1| conserved hypothetical protein; putative signal peptide [Collimonas fungivorans Ter331] Length = 242 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 117/223 (52%), Positives = 144/223 (64%), Gaps = 33/223 (14%) Query: 12 SSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQLAAVEQNAGPMNPQQAPAT 71 ++R+HPLVA AAVAV L SL+GVAAMTGL PSS S +P +AA+ G N QQ A Sbjct: 22 NNRIHPLVAAAAVAVTLASLVGVAAMTGLFPSSNSTPAP--VAAMSAAPGDYNSQQPGAQ 79 Query: 72 RLA----------------------------PQQAAYPSQSAEAPRAA---AVCSSCGEV 100 + A P+ A P Q AP +A A+C SCG V Sbjct: 80 QQANGAPAGQNGYYQQQPAQAQQQQPRSAPRPEYAQAPRQQEPAPVSAPSPAICHSCGRV 139 Query: 101 VAVRAVQHTPQTSGVGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMVEKNVR 160 +++A+QH SG+GIA GAV+GG+LG+Q+G GNG TLAT+AGAVGGG+AGN VEK R Sbjct: 140 ESIQAIQHAAPPSGLGIAAGAVLGGVLGHQVGHGNGNTLATVAGAVGGGFAGNEVEKRTR 199 Query: 161 TTTTYVVDVRMDNGKSRSFPQSGANWRVGDQVRVVNGHLESRG 203 T TTY V VRM++GK+R+FPQSG WRVGD V+VVNGHLE RG Sbjct: 200 TNTTYQVVVRMEDGKARTFPQSGQGWRVGDPVQVVNGHLEGRG 242 >ref|YP_001100489.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL62366.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 226 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 110/231 (47%), Positives = 147/231 (63%), Gaps = 34/231 (14%) Query: 1 METNNAIVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQ-LAAVEQN 59 MET N S+R+HPLVA AA+ V+LVSL+GVAAMTG+LP+S SA++ ++ +AA+++ Sbjct: 1 METKN-----NSNRIHPLVAAAAIGVLLVSLVGVAAMTGMLPNSNSASAQKEAIAALDKE 55 Query: 60 ---------------------AGPMNPQQAPATRLAPQ-----QAAYPSQSAEAPRA-AA 92 A ++A RL + + A +SA + A A Sbjct: 56 AAEKAAEAKAAEERANEARMAAQKTEDEKARQARLKEEDRRIAERAKARESAPSKVAQAQ 115 Query: 93 VCSSCGEVVAVRAVQHTPQTSGVGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAG 152 VC CG V +VR+VQ + SGVG+ GGAVVGGLLGNQIG G+GR+LAT+AGAVGGG+AG Sbjct: 116 VCYDCGRVESVRSVQTAAKPSGVGVVGGAVVGGLLGNQIGNGSGRSLATVAGAVGGGFAG 175 Query: 153 NMVEKNVRTTTTYVVDVRMDNGKSRSFPQSGA-NWRVGDQVRVVNGHLESR 202 N +EK RT TY V VRM++GK R+FP NW GD+VRVV+G+L +R Sbjct: 176 NEIEKRTRTAMTYEVRVRMEDGKIRTFPYDNQPNWSAGDRVRVVDGYLRAR 226 >ref|ZP_08276001.1| putative outer membrane lipoprotein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30528.1| putative outer membrane lipoprotein [Oxalobacteraceae bacterium IMCC9480] Length = 199 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 103/193 (53%), Positives = 131/193 (67%), Gaps = 18/193 (9%) Query: 26 VILVSLIGVAAMTGLLPSSKSANSPQQLAAVEQNA-----GPM----NPQQAPATR---- 72 VILVSL+GVAA+TGLLPSS + S + A V+ N+ PM N Q++ A+ Sbjct: 8 VILVSLVGVAAITGLLPSSTANQSAE--ATVKANSQTSAPAPMLASENTQKSAASEPVVK 65 Query: 73 -LAP-QQAAYPSQSAEAPRAAAVCSSCGEVVAVRAVQHTPQTSGVGIAGGAVVGGLLGNQ 130 +P +QA P+ +AAA C +CG V +V+ +Q Q SGVG+ GAV+GGLLGNQ Sbjct: 66 HASPAKQAPRPATDNYQQQAAASCYNCGRVESVKTIQSAAQPSGVGVGVGAVLGGLLGNQ 125 Query: 131 IGGGNGRTLATIAGAVGGGYAGNMVEKNVRTTTTYVVDVRMDNGKSRSFPQSGAN-WRVG 189 +GGGNGRTLAT+AGAVGGGYAGN VEK R TT+Y V VRMD+G+ ++FP + WR G Sbjct: 126 VGGGNGRTLATVAGAVGGGYAGNEVEKRSRGTTSYQVRVRMDDGQLQTFPSDSPDGWRAG 185 Query: 190 DQVRVVNGHLESR 202 D+VRVVNG L SR Sbjct: 186 DEVRVVNGSLTSR 198 >ref|YP_001352949.1| hypothetical protein mma_1259 [Janthinobacterium sp. Marseille] gb|ABR90548.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 221 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 148/225 (65%), Gaps = 27/225 (12%) Query: 1 METNNAIVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQ-LAAV--- 56 METNN +SR+HPL+A AAVAV+LV L+G+AAMTG+LP+S S+ S ++ +AA+ Sbjct: 1 METNNN----STSRIHPLIAAAAVAVLLVCLVGIAAMTGMLPNSNSSGSQKEAIAALEKE 56 Query: 57 ----EQNAGPMNPQQAPATRLAPQQAAYP--------------SQSAEAPRAAAVCSSCG 98 A + A R A ++ A ++ A+A A VCS+CG Sbjct: 57 AADKAAEAQAAEERADQARREADERQAAAAKAAKQAQARENANNKVAQAAPVAQVCSNCG 116 Query: 99 EVVAVRAVQHTPQTSGVGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMVEKN 158 + ++R+VQ + SGVGI GGAVVGGLLGNQIG GNGR+LAT+AGAVGGGYAGN +EK Sbjct: 117 RIESIRSVQTAAKPSGVGIVGGAVVGGLLGNQIGNGNGRSLATVAGAVGGGYAGNEIEKR 176 Query: 159 VRTTTTYVVDVRMDNGKSRSFPQSGA-NWRVGDQVRVVNGHLESR 202 RT TTY V VRM++G+ R+FP + NW GDQVRVV+G+L +R Sbjct: 177 TRTATTYEVRVRMEDGRIRTFPYNNQPNWNTGDQVRVVDGYLRAR 221 >ref|YP_003604394.1| 17 kDa surface antigen [Burkholderia sp. CCGE1002] gb|ADG14883.1| 17 kDa surface antigen [Burkholderia sp. CCGE1002] Length = 213 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 103/210 (49%), Positives = 127/210 (60%), Gaps = 11/210 (5%) Query: 1 METNNAIVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSP-QQLA--AVE 57 M TN S SR+HPLVAGAAVAVIL S G+AAMTGLLP+S++ P Q A AV+ Sbjct: 1 MNTNLPSDSSPRSRIHPLVAGAAVAVILASGTGIAAMTGLLPTSRAVTPPPSQTASVAVQ 60 Query: 58 QNAGPM----NPQQAPATRLAPQQA---AYPSQSAEAPRAAAVCSSCGEVVAVRAVQHTP 110 + P+ +P+ + A+ AP+ A +Y + PRA V GEVVAV AVQ Sbjct: 61 PASTPLESHVHPRHSNASSPAPRYAHDDSYRDATQPPPRAVTVDPDGGEVVAVNAVQTQE 120 Query: 111 QTSGVGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMVEKNVRTTTTYVVDVR 170 +G+G GGAV GGLLGNQ+G G GR LATIAGAVGGG AGN +E VR TY V VR Sbjct: 121 PATGLGAVGGAVAGGLLGNQVGQGRGRVLATIAGAVGGGLAGNGIEHAVRKVATYQVQVR 180 Query: 171 MDNGKSRSFPQSG-ANWRVGDQVRVVNGHL 199 M +G R+F +VG++V V L Sbjct: 181 MQDGSYRNFNYDNQPTVQVGERVHVYGDSL 210 >ref|ZP_06843980.1| 17 kDa surface antigen [Burkholderia sp. Ch1-1] gb|EFG68321.1| 17 kDa surface antigen [Burkholderia sp. Ch1-1] Length = 231 Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 94/207 (45%), Positives = 117/207 (56%), Gaps = 28/207 (13%) Query: 1 METNNAIVKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQ----LAAV 56 M TN Q SR+HPL AGAAVAVIL S G+AAMTG+LP+S++ SP + A Sbjct: 1 MNTNLTPDLPQRSRIHPLFAGAAVAVILASATGIAAMTGILPTSRATTSPSTPVAPVTAQ 60 Query: 57 EQNAGPMNPQQAPATRLAPQQAA------------------------YPSQSAEAPRAAA 92 +A +PQ A R+ + + Y + + APR A Sbjct: 61 ISSAPATSPQPATEQRVTHEDTSAQPRVHHHRSATVEQASRYANDNTYQNSAQPAPRPVA 120 Query: 93 VCSSCGEVVAVRAVQHTPQTSGVGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAG 152 V ++ GEVVAV VQ T+G+G GGAV GGLLGNQ+GGG GR L TIAGAVGGG AG Sbjct: 121 VDANAGEVVAVNTVQEAEPTTGLGAVGGAVAGGLLGNQVGGGRGRVLTTIAGAVGGGLAG 180 Query: 153 NMVEKNVRTTTTYVVDVRMDNGKSRSF 179 N +E VR T+Y V VRM +G R+F Sbjct: 181 NGIEHAVRKATSYQVQVRMQDGSYRNF 207 >gb|EGW61107.1| hypothetical protein DsuiDRAFT_02059 [Dechlorosoma suillum PS] Length = 194 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/192 (39%), Positives = 107/192 (55%), Gaps = 17/192 (8%) Query: 11 QSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKSANSPQQLAAVEQNAGPMNPQQAPA 70 ++ RLHPL+ AAV++ + SL+G+ A+TGL+PS A+S Q +++A PA Sbjct: 17 RARRLHPLLTAAAVSLTVFSLLGIGAITGLIPS---ASSQLQEKGADKDAAKAEEGGKPA 73 Query: 71 TRLAPQQAAYPSQSAEAPRAAAVCSSCGEVVAVRAVQHTPQTSGVGIAGGAVVGGLLGNQ 130 + A A + C++CG V VR VQ SG+G G V G L+GNQ Sbjct: 74 -------------AKGAASAKSTCANCGVVETVRMVQLEGNASGLGAVAGGVTGALVGNQ 120 Query: 131 IGGGNGRTLATIAGAVGGGYAGNMVEKNVRTTTTYVVDVRMDNGKSRSFPQSGA-NWRVG 189 G G G T T+ GA GG YAGN +EKN+ T Y + VRMD+G R+ QS G Sbjct: 121 FGRGGGNTAMTLIGAAGGAYAGNSIEKNMNRQTAYRITVRMDDGAYRTISQSHVPAVAAG 180 Query: 190 DQVRVVNGHLES 201 D+V+VVNG++ + Sbjct: 181 DKVKVVNGNVSA 192 >ref|ZP_07675889.1| surface antigen family protein [Ralstonia sp. 5_7_47FAA] gb|EFP65633.1| surface antigen family protein [Ralstonia sp. 5_7_47FAA] Length = 247 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 92/225 (40%), Positives = 124/225 (55%), Gaps = 34/225 (15%) Query: 8 VKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKS-------------------AN 48 V S R+HPL+ AAVAVI+ SL VAA+TG+LP+SK+ A+ Sbjct: 21 VPPSSRRMHPLMTTAAVAVIIASLTAVAAITGVLPTSKATQGSTDPNVAAQSAAAMPGAS 80 Query: 49 SPQQLAAVEQNAGPMNPQQAPATRLAP-----QQAAY--------PSQSAEAPRAAAVCS 95 +P LAA Q P PA +AP ++ +Y PS + PR +A Sbjct: 81 TPMALAAPGQTTQPAQAAPYPAQNVAPAPVRAREPSYAERAPSGNPSYAQTQPRQSA-SP 139 Query: 96 SCGEVVAVRAVQHTPQTSGVGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMV 155 G V +V + + +G+G+ GGAVVGGLLGNQIG GNGRTLAT+ GA+ GGY G++ Sbjct: 140 YAGHVTSVTPITMQGKETGLGMIGGAVVGGLLGNQIGRGNGRTLATVGGALAGGYGGHVA 199 Query: 156 EKNVRTTTTYVVDVRMDNGKSRSFPQSGA-NWRVGDQVRVVNGHL 199 E T Y V+VRMDNG +RSF A ++ G++V + NG L Sbjct: 200 ENYYHRDTEYRVNVRMDNGTTRSFMYKAAPGFQAGERVHIENGTL 244 >ref|YP_002980929.1| 17 kDa surface antigen [Ralstonia pickettii 12D] gb|ACS62257.1| 17 kDa surface antigen [Ralstonia pickettii 12D] Length = 247 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 92/225 (40%), Positives = 124/225 (55%), Gaps = 34/225 (15%) Query: 8 VKSQSSRLHPLVAGAAVAVILVSLIGVAAMTGLLPSSKS-------------------AN 48 V S R+HPL+ AAVAVI+ SL VAA+TG+LP+SK+ A+ Sbjct: 21 VPPSSRRMHPLMTTAAVAVIIASLTAVAAITGVLPTSKATQGSTDPNVAAQSATAMPGAS 80 Query: 49 SPQQLAAVEQNAGPMNPQQAPATRLAP-----QQAAY--------PSQSAEAPRAAAVCS 95 +P LAA Q P PA +AP ++ +Y PS + PR +A Sbjct: 81 TPMALAAPGQTTQPAQAAPYPAQNVAPAPVRAREPSYAERAPSGNPSYAQTQPRQSA-SP 139 Query: 96 SCGEVVAVRAVQHTPQTSGVGIAGGAVVGGLLGNQIGGGNGRTLATIAGAVGGGYAGNMV 155 G V +V + + +G+G+ GGAVVGGLLGNQIG GNGRTLAT+ GA+ GGY G++ Sbjct: 140 YAGHVTSVTPITMQGKETGLGMIGGAVVGGLLGNQIGRGNGRTLATVGGALAGGYGGHVA 199 Query: 156 EKNVRTTTTYVVDVRMDNGKSRSFPQSGA-NWRVGDQVRVVNGHL 199 E T Y V+VRMDNG +RSF A ++ G++V + NG L Sbjct: 200 ENYYHRDTEYRVNVRMDNGTTRSFMYKAAPGFQAGERVHIENGTL 244