BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0027.p (206 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776165.1| outer membrane polysaccharide export protein... 410 e-113 ref|NP_841833.1| polysaccharide export protein, outer membrane [... 239 1e-61 ref|YP_747116.1| polysaccharide export protein [Nitrosomonas eut... 236 2e-60 ref|YP_413210.1| polysaccharide export protein [Nitrosospira mul... 235 3e-60 ref|YP_314039.1| polysaccharide export outer membrane protein [T... 227 1e-57 ref|ZP_08829176.1| alginate biosynthesis transcriptional regulat... 224 4e-57 ref|ZP_08647381.1| Polysaccharide export protein [gamma proteoba... 224 5e-57 ref|YP_002514457.1| polysaccharide export protein [Thioalkalivib... 224 5e-57 ref|ZP_08817221.1| polysaccharide export protein, PEP-CTERM syte... 216 1e-54 ref|ZP_08401402.1| polysaccharide export protein [Rubrivivax ben... 215 3e-54 >ref|YP_003776165.1| outer membrane polysaccharide export protein [Herbaspirillum seropedicae SmR1] gb|ADJ64257.1| outer membrane polysaccharide export protein [Herbaspirillum seropedicae SmR1] Length = 206 Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust. Identities = 206/206 (100%), Positives = 206/206 (100%) Query: 1 MRPQLVRYASYILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEV 60 MRPQLVRYASYILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEV Sbjct: 1 MRPQLVRYASYILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEV 60 Query: 61 SLVVPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSD 120 SLVVPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSD Sbjct: 61 SLVVPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSD 120 Query: 121 QIRVIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDD 180 QIRVIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDD Sbjct: 121 QIRVIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDD 180 Query: 181 LMKDGDISANLAMRPGDILVIPESIF 206 LMKDGDISANLAMRPGDILVIPESIF Sbjct: 181 LMKDGDISANLAMRPGDILVIPESIF 206 >ref|NP_841833.1| polysaccharide export protein, outer membrane [Nitrosomonas europaea ATCC 19718] emb|CAD85716.1| putative polysaccharide export protein, outer membrane [Nitrosomonas europaea ATCC 19718] Length = 205 Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 118/196 (60%), Positives = 148/196 (75%), Gaps = 7/196 (3%) Query: 11 YILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEVSLVVPVRPDG 70 Y+LA L GC + P+ T V +Y IGPGD LN+IVWRNPE+S+ VPVRPDG Sbjct: 17 YLLA----LGGCTTYPLLSTQ---GEQVPHDYLIGPGDTLNIIVWRNPEISMSVPVRPDG 69 Query: 71 KFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSDQIRVIGQAAK 130 K +TPL D+ ASGKT E+ I + LS Y+ PVVTVV+TGF G +S+QIRVIG+AA+ Sbjct: 70 KITTPLVEDLPASGKTSTELARNIEETLSKYLQQPVVTVVITGFVGPFSEQIRVIGEAAQ 129 Query: 131 PQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDDLMKDGDISAN 190 PQALPYR+ MSL+DV+IAVGG T+FAAGNRA +IR VDG+Q + VRL+DL++DGDISAN Sbjct: 130 PQALPYRENMSLMDVMIAVGGLTDFAAGNRARIIRNVDGEQQQFRVRLEDLIRDGDISAN 189 Query: 191 LAMRPGDILVIPESIF 206 + + GD+LVIPES F Sbjct: 190 VPVYQGDVLVIPESFF 205 >ref|YP_747116.1| polysaccharide export protein [Nitrosomonas eutropha C91] gb|ABI59151.1| polysaccharide export protein [Nitrosomonas eutropha C91] Length = 205 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/190 (59%), Positives = 145/190 (76%), Gaps = 3/190 (1%) Query: 17 LLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEVSLVVPVRPDGKFSTPL 76 LL+ C + P+ T V +Y IGPGD LN+IVWRNPE+S+ VPVRPDGK +TPL Sbjct: 19 FLLSSCTTYPLLGTQ---GEQVPHDYLIGPGDTLNIIVWRNPEISMSVPVRPDGKITTPL 75 Query: 77 ANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSDQIRVIGQAAKPQALPY 136 D+ ASGKT E+ +I + L+ Y+ PVVTVV+T F G + +QIRVIG+A++PQALPY Sbjct: 76 VEDLPASGKTSTELARDIEETLAKYLQQPVVTVVITDFVGPFGEQIRVIGEASQPQALPY 135 Query: 137 RKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDDLMKDGDISANLAMRPG 196 R++MSL+DV+IAVGG T+FAAGNRA +IR VDGKQ + VRLDDL++DGDISAN+ + G Sbjct: 136 REDMSLMDVMIAVGGLTDFAAGNRARIIRSVDGKQQQFRVRLDDLIRDGDISANVPVYQG 195 Query: 197 DILVIPESIF 206 D+LVIPES F Sbjct: 196 DVLVIPESYF 205 >ref|YP_413210.1| polysaccharide export protein [Nitrosospira multiformis ATCC 25196] gb|ABB75818.1| Polysaccharide export protein [Nitrosospira multiformis ATCC 25196] Length = 208 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 122/211 (57%), Positives = 160/211 (75%), Gaps = 8/211 (3%) Query: 1 MRPQLVRYASY-----ILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVW 55 M P +R A++ ++ L L GC + P + + PV +Y IGPGDN+++IVW Sbjct: 1 MNPLRIRTATWFSCFAVVLPLLSLGGCKTYP---SLNPDEKPVAHDYLIGPGDNVDIIVW 57 Query: 56 RNPEVSLVVPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFS 115 RNPEVS+ VPVRPDGK +TPL D+ ASGKT ++ +I +ALS YI PVVTVVVT F Sbjct: 58 RNPEVSMAVPVRPDGKITTPLVEDLSASGKTSTQLARDIEEALSKYIQQPVVTVVVTEFV 117 Query: 116 GIYSDQIRVIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIA 175 G YS+QIRVIG+AA+PQALPYR+EM+L+DV+IAVGG T+FAAGNRA ++R VDGKQ + + Sbjct: 118 GPYSEQIRVIGEAAEPQALPYREEMTLMDVLIAVGGMTDFAAGNRARIVRNVDGKQHQFS 177 Query: 176 VRLDDLMKDGDISANLAMRPGDILVIPESIF 206 VRLDDL++DGD++AN+ M+ GD+LVIPES F Sbjct: 178 VRLDDLIRDGDVTANVPMKQGDVLVIPESYF 208 >ref|YP_314039.1| polysaccharide export outer membrane protein [Thiobacillus denitrificans ATCC 25259] gb|AAZ96234.1| polysaccharide export outer membrane protein [Thiobacillus denitrificans ATCC 25259] Length = 207 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/195 (54%), Positives = 146/195 (74%) Query: 12 ILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEVSLVVPVRPDGK 71 +L + + +AGC+ P A + Y +GPGD++NV VWRNPEVS PVRPDGK Sbjct: 13 LLLAVVAVAGCSGTPTYPPAPERTGQYDWNYLVGPGDSVNVFVWRNPEVSGTFPVRPDGK 72 Query: 72 FSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSDQIRVIGQAAKP 131 + L D++ASGKTP ++ +I KAL YI +P+VTV+V G G + QIRV+G+AAKP Sbjct: 73 MTMNLVEDLQASGKTPTQLARDIEKALGKYIQEPIVTVIVGGGIGPFDQQIRVVGEAAKP 132 Query: 132 QALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDDLMKDGDISANL 191 QAL YR++MSL+D++IAVGG T+FAAGN+A ++R VDGKQ ++ VRL+DL++ GD+SAN+ Sbjct: 133 QALNYREKMSLVDLMIAVGGLTDFAAGNKAYILRTVDGKQERLGVRLEDLLRGGDVSANV 192 Query: 192 AMRPGDILVIPESIF 206 MRPGD+LV+PES+F Sbjct: 193 DMRPGDVLVVPESLF 207 >ref|ZP_08829176.1| alginate biosynthesis transcriptional regulatory protein AlgB [endosymbiont of Riftia pachyptila (vent Ph05)] gb|EGV51905.1| alginate biosynthesis transcriptional regulatory protein AlgB [endosymbiont of Riftia pachyptila (vent Ph05)] Length = 217 Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 117/205 (57%), Positives = 148/205 (72%), Gaps = 8/205 (3%) Query: 10 SYILASTL---LLAGCASR--PVADTASVPAAPVNSE---YRIGPGDNLNVIVWRNPEVS 61 S +L S L +LAGCAS V A V V +E Y IGPGD+L V VW +PE+S Sbjct: 13 SMVLVSVLAAIVLAGCASAGGTVQKEAPVSITRVGAEAPKYLIGPGDSLKVFVWGDPELS 72 Query: 62 LVVPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSDQ 121 V VRPDG +TPL D++ASGKTP E+ + LS +I +P VTV VT F G Y++Q Sbjct: 73 SEVIVRPDGLITTPLVEDMQASGKTPTELARNLEGNLSKFIKNPKVTVTVTNFVGQYTEQ 132 Query: 122 IRVIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDDL 181 IRV+GQAA+PQ+LPYR+ MSLLDVVIAVGG TEFAAGN+AS++R ++GK + VRLDDL Sbjct: 133 IRVVGQAAQPQSLPYREHMSLLDVVIAVGGLTEFAAGNKASIVRRINGKTEQFQVRLDDL 192 Query: 182 MKDGDISANLAMRPGDILVIPESIF 206 ++DGDISAN+ M PGD+L+IPE+ F Sbjct: 193 VRDGDISANVEMLPGDVLIIPETWF 217 >ref|ZP_08647381.1| Polysaccharide export protein [gamma proteobacterium IMCC2047] gb|EGH00199.1| Polysaccharide export protein [gamma proteobacterium IMCC2047] Length = 212 Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 106/212 (50%), Positives = 158/212 (74%), Gaps = 13/212 (6%) Query: 4 QLVRYASYILASTLLLAGCASRPVADTASVPAAPVNSE---------YRIGPGDNLNVIV 54 +LV+ ++ +T+L A C+S + S+P++ V Y IGPGD++N+ V Sbjct: 5 ELVKGGLLVVCATVL-AACSS---FNGGSLPSSVVQESSMAKSGDYTYLIGPGDSVNIFV 60 Query: 55 WRNPEVSLVVPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGF 114 WRNPE+S V VRPDGK ++PL +++ASGKTP+++ ++ LS YI +P+VTV+V GF Sbjct: 61 WRNPEISNSVTVRPDGKITSPLVEELQASGKTPEQLARDVEDVLSTYIKEPIVTVMVGGF 120 Query: 115 SGIYSDQIRVIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKI 174 G YS+QIR++G+AA PQA+P+R++M+ LD++IAVGG TEFAAGNRAS++R+VDG+Q Sbjct: 121 VGPYSEQIRIVGEAANPQAIPFREKMTALDIMIAVGGLTEFAAGNRASIVRVVDGEQKTY 180 Query: 175 AVRLDDLMKDGDISANLAMRPGDILVIPESIF 206 V+L+DL++ GDI+AN+ M+PGD+L+IPES F Sbjct: 181 QVKLNDLLRKGDINANVDMKPGDVLIIPESFF 212 >ref|YP_002514457.1| polysaccharide export protein [Thioalkalivibrio sulfidophilus HL-EbGr7] gb|ACL73470.1| polysaccharide export protein [Thioalkalivibrio sulfidophilus HL-EbGr7] Length = 210 Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 106/203 (52%), Positives = 146/203 (71%), Gaps = 1/203 (0%) Query: 4 QLVRYASYILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEVSLV 63 + +R++ +L +LL CA+ P + PAA Y IGPGD LNV VW NP++++ Sbjct: 9 KWLRWSGLVLV-VMLLGACAAGPDVPLSEAPAAQAEPRYTIGPGDQLNVFVWGNPDLTVT 67 Query: 64 VPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSDQIR 123 VPVRPDG+ +TPL D++ASGKTP E+ +I ++L+ Y+ +P+VTV VT F G ++QIR Sbjct: 68 VPVRPDGRITTPLVEDVQASGKTPTELARDIEQSLAHYVQNPIVTVTVTNFVGTSTEQIR 127 Query: 124 VIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDDLMK 183 VIGQA +P+++PYR M++LDV+I VGG TEFAAGNRA++IR G Q VRL DL+ Sbjct: 128 VIGQAVQPRSIPYRVGMTVLDVIIEVGGLTEFAAGNRATIIRGPTGAQQAFRVRLSDLVT 187 Query: 184 DGDISANLAMRPGDILVIPESIF 206 GDISAN+ M+PGD+L+IPES F Sbjct: 188 RGDISANVPMQPGDVLIIPESWF 210 >ref|ZP_08817221.1| polysaccharide export protein, PEP-CTERM sytem-associated [endosymbiont of Tevnia jerichonana (vent Tica)] gb|EGW53737.1| polysaccharide export protein, PEP-CTERM sytem-associated [endosymbiont of Tevnia jerichonana (vent Tica)] Length = 172 Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/166 (61%), Positives = 131/166 (78%) Query: 41 EYRIGPGDNLNVIVWRNPEVSLVVPVRPDGKFSTPLANDIEASGKTPKEVGAEIAKALSA 100 +Y IGPGD+L V VW +PE+S V VRPDG +TPL D++ASGKTP E+ + LS Sbjct: 7 KYLIGPGDSLKVFVWGDPELSSEVIVRPDGLITTPLVEDMQASGKTPTELARNLEGNLSK 66 Query: 101 YITDPVVTVVVTGFSGIYSDQIRVIGQAAKPQALPYRKEMSLLDVVIAVGGTTEFAAGNR 160 +I +P VTV VT F G Y++QIRV+GQAA+PQ+LPYR+ MSLLDVVIAVGG TEFAAGN+ Sbjct: 67 FIKNPKVTVTVTNFVGQYTEQIRVVGQAAQPQSLPYREHMSLLDVVIAVGGLTEFAAGNK 126 Query: 161 ASVIRLVDGKQTKIAVRLDDLMKDGDISANLAMRPGDILVIPESIF 206 AS++R ++GK + VRLDDL++DGDISAN+ M PGD+L+IPE+ F Sbjct: 127 ASIVRRINGKTEQFQVRLDDLVRDGDISANVEMLPGDVLIIPETWF 172 >ref|ZP_08401402.1| polysaccharide export protein [Rubrivivax benzoatilyticus JA2] gb|EGJ09735.1| polysaccharide export protein [Rubrivivax benzoatilyticus JA2] Length = 210 Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 104/195 (53%), Positives = 145/195 (74%), Gaps = 1/195 (0%) Query: 12 ILASTLLLAGCASRPVADTASVPAAPVNSEYRIGPGDNLNVIVWRNPEVSLVVPVRPDGK 71 +L + LA C+S A AA + Y IG GD++N+ VWRNPE+S+ VPVRPDGK Sbjct: 17 VLVAVASLAACSSFRSHPPAPAQAAAQDYTYIIGAGDSVNISVWRNPELSMSVPVRPDGK 76 Query: 72 FSTPLANDIEASGKTPKEVGAEIAKALSAYITDPVVTVVVTGFSGIYSDQIRVIGQAAKP 131 S PL +++ A GKT ++ E+ + L Y+ DP+VTV+V GF G YS+QIRV+G+AAKP Sbjct: 77 VSAPLVDEVMAQGKTSVQLARELEQVLGKYVRDPIVTVMVNGFVGPYSEQIRVVGEAAKP 136 Query: 132 QALPYRKEMSLLDVVIAVGGTTEFAAGNRASVIRLVDGKQTKIAVRLDDLMKDGDISANL 191 Q LP++ +M++LDV+IA GG T+FAAGNRA+++R +G + + +VRLDDL+KDGD+SAN+ Sbjct: 137 QFLPFKSKMTVLDVMIAAGGLTDFAAGNRATILRTSEGNK-QYSVRLDDLIKDGDVSANV 195 Query: 192 AMRPGDILVIPESIF 206 MRPGDIL+IP+S F Sbjct: 196 EMRPGDILIIPQSFF 210