BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0025.p (109 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776157.1| glycosyltransferase [Herbaspirillum seropedi... 219 1e-55 ref|YP_003760941.1| hypothetical protein Nwat_1755 [Nitrosococcu... 95 4e-18 ref|ZP_05048351.1| hypothetical protein NOC27_1774 [Nitrosococcu... 93 2e-17 ref|YP_343950.1| hypothetical protein Noc_1958 [Nitrosococcus oc... 93 2e-17 ref|ZP_08648483.1| TPR/glycosyl transferase domain protein [gamm... 90 1e-16 ref|YP_004512146.1| hypothetical protein Metme_1218 [Methylomona... 88 3e-16 ref|YP_748293.1| hypothetical protein Neut_2106 [Nitrosomonas eu... 83 2e-14 ref|YP_521966.1| hypothetical protein Rfer_0684 [Rhodoferax ferr... 80 1e-13 ref|YP_003527649.1| hypothetical protein Nhal_2164 [Nitrosococcu... 77 7e-13 ref|YP_003443761.1| hypothetical protein Alvin_1803 [Allochromat... 73 2e-11 >ref|YP_003776157.1| glycosyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ64249.1| glycosyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 428 Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD Sbjct: 320 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 379 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSLP 109 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSLP Sbjct: 380 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSLP 428 >ref|YP_003760941.1| hypothetical protein Nwat_1755 [Nitrosococcus watsonii C-113] gb|ADJ28620.1| conserved hypothetical protein [Nitrosococcus watsonii C-113] Length = 413 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/108 (47%), Positives = 67/108 (62%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 ML ADGLL+ Q N Q PAK+YEY RAR+P+L L D +G+TAG+L+ AG + + Sbjct: 298 MLTADGLLILQASNCNHQIPAKLYEYLRARRPILALTDPKGDTAGVLQKAGIETIAPLDS 357 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSL 108 AIA L FL + TA VASEA +A SSR+ R LA L +++ Sbjct: 358 AAAIATTLQNFLTRLQTNTAPVASEAEIARSSRSCRAASLAALLKETV 405 >ref|ZP_05048351.1| hypothetical protein NOC27_1774 [Nitrosococcus oceani AFC27] gb|EDZ68447.1| hypothetical protein NOC27_1774 [Nitrosococcus oceani AFC27] Length = 423 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/108 (50%), Positives = 68/108 (62%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 ML ADGLL+ Q N Q PAK+YEY RAR+P+LGL D EG+TA +LR AG + + Sbjct: 308 MLTADGLLILQASNCNHQIPAKLYEYLRARRPILGLTDSEGDTARVLRQAGIETVAPLDS 367 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSL 108 AI L FL+ + DGTA VASEA +A SSR R LAE +++ Sbjct: 368 AAAITATLQDFLKQLQDGTAPVASEAEIARSSRRSRVASLAECLEETI 415 >ref|YP_343950.1| hypothetical protein Noc_1958 [Nitrosococcus oceani ATCC 19707] gb|ABA58420.1| hypothetical protein Noc_1958 [Nitrosococcus oceani ATCC 19707] Length = 419 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/108 (50%), Positives = 68/108 (62%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 ML ADGLL+ Q N Q PAK+YEY RAR+P+LGL D EG+TA +LR AG + + Sbjct: 304 MLTADGLLILQASNCNHQIPAKLYEYLRARRPILGLTDSEGDTARVLRQAGIETVAPLDS 363 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSL 108 AI L FL+ + DGTA VASEA +A SSR R LAE +++ Sbjct: 364 AAAITATLQDFLKQLQDGTAPVASEAEIARSSRRSRVASLAECLEETI 411 >ref|ZP_08648483.1| TPR/glycosyl transferase domain protein [gamma proteobacterium IMCC2047] gb|EGG99093.1| TPR/glycosyl transferase domain protein [gamma proteobacterium IMCC2047] Length = 311 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 61/108 (56%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 ML DGLL+FQ N Q PAK+YEYFRA KPVL L D G TA L AG D+ ++ D Sbjct: 200 MLSVDGLLLFQASSCNHQIPAKLYEYFRAGKPVLALTDKAGNTATTLAEAGLDDIADLAD 259 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSL 108 I L F+ + +G A VAS + A+ SR + AE+F S+ Sbjct: 260 KRDIQQQLVSFVVGLREGRAKVASSEVAASYSRQSLIARFAEVFNVSV 307 >ref|YP_004512146.1| hypothetical protein Metme_1218 [Methylomonas methanica MC09] gb|AEF99646.1| hypothetical protein Metme_1218 [Methylomonas methanica MC09] Length = 416 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 ML DGL++FQ N Q PAKIYEY RAR+P+L L D +G+TA +L AG + D Sbjct: 308 MLVVDGLVIFQASNCNHQIPAKIYEYLRARRPILALTDPDGDTAKVLLDAGLASCIAPLD 367 Query: 61 PE-AIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQ 106 E AIA +++ F+ + ++ VAS+A++ + SR RT+ LA+L + Sbjct: 368 DEAAIAELISNFIDNVDVRSSAVASDAVINSHSRRARTKLLAQLLDE 414 >ref|YP_748293.1| hypothetical protein Neut_2106 [Nitrosomonas eutropha C91] gb|ABI60328.1| conserved hypothetical protein [Nitrosomonas eutropha C91] Length = 408 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/104 (43%), Positives = 61/104 (58%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 ML DGLL+ Q N Q PAK+YEY RA++P+L L DL G+TA LRS G + + Sbjct: 299 MLTVDGLLILQAANCNNQIPAKLYEYLRAQRPILALTDLVGDTAEKLRSMGVDTIAPLDS 358 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELF 104 EAI L RFL + + A +A + ++SR RT++LA L Sbjct: 359 KEAIMTGLRRFLALLREDKAPIAPMDKILSNSREARTKELARLL 402 >ref|YP_521966.1| hypothetical protein Rfer_0684 [Rhodoferax ferrireducens T118] gb|ABD68435.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 437 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/105 (42%), Positives = 57/105 (54%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 M+ D LLV Q N Q PAKIYEY RA KP+LGL D +G+TAG+LR AG D+ + Sbjct: 329 MMAVDALLVMQASNCNAQIPAKIYEYLRAGKPILGLTDPDGDTAGVLRGAGLNDMARLDS 388 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFT 105 + IA VL F A+ A + A V +SR R+ L Sbjct: 389 ADEIARVLPVFAAAVRADKAKLPDPAAVQLASRRGRSELLVRFLN 433 >ref|YP_003527649.1| hypothetical protein Nhal_2164 [Nitrosococcus halophilus Nc4] gb|ADE15262.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4] Length = 417 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 62/108 (57%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 ML ADGLLV Q N Q PAK+YEY AR+P+L L D G+TAG+LR AG + + Sbjct: 308 MLAADGLLVLQASNCNHQIPAKLYEYLHARRPILALTDPAGDTAGVLRRAGIETIAPLDS 367 Query: 61 PEAIAPVLTRFLRAIADGTAHVASEALVAASSRTHRTRQLAELFTQSL 108 IA F++ + GT ASEA +A SSR R LA L +++ Sbjct: 368 ATVIAAAFQDFVKRLQAGTVPGASEAEIARSSRRSRGASLAALLEETI 415 >ref|YP_003443761.1| hypothetical protein Alvin_1803 [Allochromatium vinosum DSM 180] gb|ADC62729.1| conserved hypothetical protein [Allochromatium vinosum DSM 180] Length = 413 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 4/100 (4%) Query: 1 MLEADGLLVFQGRPFNRQAPAKIYEYFRARKPVLGLLDLEGETAGMLRSAGFPDLVEMTD 60 M ADGLL+ Q N+Q PAK YEY R+P+L L D G+TA +R+AG L + Sbjct: 296 MCLADGLLLLQASNCNQQIPAKFYEYLACRRPLLALTDPAGDTAQAVRAAGVDALAPLDS 355 Query: 61 PEAIAPVLTRFLRAIADGTA-HVASEALVAASSRTHRTRQ 99 P AI +L RF IAD TA + + +A +SR RT Q Sbjct: 356 PTAIVALLIRF---IADPTAISMPTAEAIAGASRRSRTEQ 392