BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0023.p (356 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776156.1| polysaccharide deacetylase [Herbaspirillum s... 625 e-177 ref|XP_002536554.1| conserved hypothetical protein [Ricinus comm... 433 e-119 ref|YP_003528663.1| polysaccharide deacetylase [Nitrosococcus ha... 270 2e-70 ref|YP_003760949.1| polysaccharide deacetylase [Nitrosococcus wa... 270 3e-70 ref|YP_740957.1| polysaccharide deacetylase [Alkalilimnicola ehr... 267 2e-69 ref|ZP_05047032.1| Polysaccharide deacetylase domain protein [Ni... 262 7e-68 ref|YP_343959.1| polysaccharide deacetylase [Nitrosococcus ocean... 261 1e-67 ref|YP_003461766.1| polysaccharide deacetylase [Thioalkalivibrio... 261 1e-67 ref|YP_159470.1| hypothetical protein ebA4315 [Aromatoleum aroma... 248 1e-63 ref|NP_840921.1| hypothetical protein NE0847 [Nitrosomonas europ... 242 6e-62 >ref|YP_003776156.1| polysaccharide deacetylase [Herbaspirillum seropedicae SmR1] gb|ADJ64248.1| polysaccharide deacetylase protein [Herbaspirillum seropedicae SmR1] Length = 353 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 313/316 (99%), Positives = 313/316 (99%), Gaps = 3/316 (0%) Query: 41 CILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLPPRAVSI 100 CILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLPPRAVSI Sbjct: 41 CILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLPPRAVSI 100 Query: 101 TFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADAHDWQAL 160 TFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADAHDWQAL Sbjct: 101 TFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADAHDWQAL 160 Query: 161 GLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERHAGPVGQAEQAD 220 GLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERHAGPVG QAD Sbjct: 161 GLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERHAGPVG---QAD 217 Query: 221 QANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNKAALEAILG 280 QANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNKAALEAILG Sbjct: 218 QANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNKAALEAILG 277 Query: 281 RRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPRGRPWDRRP 340 RRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPRGRPWDRRP Sbjct: 278 RRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPRGRPWDRRP 337 Query: 341 LMFGLRLLRWLARPGA 356 LMFGLRLLRWLARPGA Sbjct: 338 LMFGLRLLRWLARPGA 353 >ref|XP_002536554.1| conserved hypothetical protein [Ricinus communis] gb|EEF25830.1| conserved hypothetical protein [Ricinus communis] Length = 219 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 215/219 (98%), Positives = 216/219 (98%) Query: 138 MWNDRILHAVRRLPADAHDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPA 197 MWNDRILHAVRRLPADAHDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYL PA Sbjct: 1 MWNDRILHAVRRLPADAHDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLTPA 60 Query: 198 ERQRVIETLERHAGPVGQAEQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILS 257 ERQRVIETLERHAGPVGQA QADQANQADQDLMLD DMLLALAQAGVEIGGHTTSHPILS Sbjct: 61 ERQRVIETLERHAGPVGQAGQADQANQADQDLMLDRDMLLALAQAGVEIGGHTTSHPILS 120 Query: 258 RLDDAQARHEICDNKAALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTA 317 RLDDAQARHEICDNKAALEAILGR+LRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTA Sbjct: 121 RLDDAQARHEICDNKAALEAILGRQLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTA 180 Query: 318 GGSAGPEHDCYQIPRGRPWDRRPLMFGLRLLRWLARPGA 356 GGSAGPEHDCYQIPRGRPWDRRPLMFGLRLLRWLARPGA Sbjct: 181 GGSAGPEHDCYQIPRGRPWDRRPLMFGLRLLRWLARPGA 219 >ref|YP_003528663.1| polysaccharide deacetylase [Nitrosococcus halophilus Nc4] gb|ADE16276.1| polysaccharide deacetylase [Nitrosococcus halophilus Nc4] Length = 340 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/315 (47%), Positives = 194/315 (61%), Gaps = 20/315 (6%) Query: 35 GRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLP 94 GRR RL +L YHRVL DPL+ GE D A FRWQM+LLA+ F LPLAEA +RL + LP Sbjct: 32 GRRARLSVLIYHRVLPSSDPLMPGEPDAAQFRWQMELLARYFNPLPLAEAARRLWEGTLP 91 Query: 95 PRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADA 154 PRAVS+TFDDGY +ALP+LQQ+G+PAT F TG+++ G MWND+++ A+RR+P Sbjct: 92 PRAVSVTFDDGYADNVEVALPILQQVGVPATFFIATGYLDGGWMWNDKVIEALRRMPDGE 151 Query: 155 HDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETL-ERHAGPV 213 D GL L + D T + +L A +KYL+ ER+ + L +R P+ Sbjct: 152 LDLTEEGL------EVCSLSNTADRLTAVEQIL-ARLKYLSWEEREAQAQVLAQRCRVPL 204 Query: 214 GQAEQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNKA 273 + LM+ + L QAG+EIG HT +HPIL+ L A EI +KA Sbjct: 205 SNS------------LMMTSSQVRELHQAGMEIGAHTRNHPILASLARVSAEQEIAASKA 252 Query: 274 ALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPRG 333 LE +LG +RLFAYPNGKPG DY Q HV +VRG G+EAA +TA G A D +Q+PR Sbjct: 253 WLEDLLGESVRLFAYPNGKPGKDYLQEHVDIVRGLGFEAAVSTAWGVASSRSDPWQLPRF 312 Query: 334 RPWDRRPLMFGLRLL 348 PWDR P F +RLL Sbjct: 313 TPWDRTPSRFMMRLL 327 >ref|YP_003760949.1| polysaccharide deacetylase [Nitrosococcus watsonii C-113] gb|ADJ28628.1| polysaccharide deacetylase [Nitrosococcus watsonii C-113] Length = 324 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 153/329 (46%), Positives = 196/329 (59%), Gaps = 25/329 (7%) Query: 27 LGGNLLAL-------GRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVL 79 LGG L L G+R RL +L YHRVLA PD LL GE D FRWQM+LLA+ F L Sbjct: 3 LGGGLRPLASLLAPGGKRARLSVLIYHRVLAAPDALLPGEPDAMRFRWQMELLARYFNPL 62 Query: 80 PLAEALQRLRQNRLPPRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMW 139 PL+EA++RLR+ LPPRAVS+TFDDGY +ALP+LQQ+G+PAT F TG+++ G MW Sbjct: 63 PLSEAVRRLREETLPPRAVSVTFDDGYADNMEIALPILQQVGVPATFFIATGYLDGGWMW 122 Query: 140 NDRILHAVRRLPADAHDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAER 199 ND+I+ +RR+P D +GL L + D R + A +KYL ER Sbjct: 123 NDKIIETLRRMPNGDLDLTDMGLDVYSLVNTAD-------RLAAIEQILAWLKYLPGEER 175 Query: 200 QRVIETLERHAGPVGQAEQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRL 259 +R + L +H + LM+ + L QAG+EIG HT SHPIL+ L Sbjct: 176 ERRTQALTQHC-----------HESFPRSLMMTSIQVRQLRQAGMEIGAHTHSHPILASL 224 Query: 260 DDAQARHEICDNKAALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGG 319 + A A EI +KA LE +LG +RLFAYPNGKPG DY Q HV + + +EAA +TA G Sbjct: 225 EQASAEQEIATSKARLEDLLGEPVRLFAYPNGKPGKDYLQEHVGITQNLNFEAAVSTAWG 284 Query: 320 SAGPEHDCYQIPRGRPWDRRPLMFGLRLL 348 A D +Q+PR PWDR P F +RLL Sbjct: 285 VASSRSDPWQLPRFTPWDRTPSRFMVRLL 313 >ref|YP_740957.1| polysaccharide deacetylase [Alkalilimnicola ehrlichii MLHE-1] gb|ABI55467.1| polysaccharide deacetylase [Alkalilimnicola ehrlichii MLHE-1] Length = 316 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 158/318 (49%), Positives = 190/318 (59%), Gaps = 18/318 (5%) Query: 35 GRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLP 94 G R RL IL YHRVL PDPLL GE D A F+WQMQLLA+ F LPLAEA++RLR LP Sbjct: 14 GARGRLSILIYHRVLPAPDPLLPGEPDAARFQWQMQLLARHFNPLPLAEAVRRLRDGTLP 73 Query: 95 PRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADA 154 PRA +TFDDGY +ALP+L+ +G+PAT F G++ G M+ND ++ VRRLP Sbjct: 74 PRAACVTFDDGYADNAEVALPLLRSVGVPATFFIAVGYLNGGRMFNDTLIETVRRLPEGE 133 Query: 155 HDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERHAGPVG 214 D GL + + S D R L L KY PA R R +E L G Sbjct: 134 VDLTPEGLGRRRVASDSD-------RIALCKALIGQFKYQPPAVRNRGVEALPERLG--- 183 Query: 215 QAEQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNKAA 274 DLM+ L LA AG+EIGGHT +HPIL+R +AR EI + A Sbjct: 184 --------ITVPDDLMMTSGQLRGLADAGMEIGGHTLTHPILARQSAPEARQEIEAGREA 235 Query: 275 LEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPRGR 334 LE +LG+R+RLFAYPNG+PG DY HV MVR G+EAA +TA G+AGP D YQ+PR Sbjct: 236 LEGMLGQRVRLFAYPNGRPGTDYAPEHVDMVRDCGFEAAVSTAAGAAGPASDPYQLPRFT 295 Query: 335 PWDRRPLMFGLRLLRWLA 352 PWDR P F LRL R LA Sbjct: 296 PWDRTPGRFALRLARNLA 313 >ref|ZP_05047032.1| Polysaccharide deacetylase domain protein [Nitrosococcus oceani AFC27] gb|EDZ67128.1| Polysaccharide deacetylase domain protein [Nitrosococcus oceani AFC27] Length = 347 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 191/329 (58%), Gaps = 18/329 (5%) Query: 20 VLALLLRLGGNLLALGRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVL 79 VL L L L + G+R RL +L YHRVLA PD LL GE D FRWQM+LLA+ F L Sbjct: 21 VLGGLRPLASLLASSGKRARLSVLIYHRVLAAPDALLPGEPDAVQFRWQMELLARYFNPL 80 Query: 80 PLAEALQRLRQNRLPPRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMW 139 PL+EA++RLR+ LPPRAVS+TFDDGY +ALP+LQQ+ +PAT F TG+++ G MW Sbjct: 81 PLSEAVRRLREETLPPRAVSVTFDDGYADNVEVALPILQQVKVPATFFIATGYLDGGWMW 140 Query: 140 NDRILHAVRRLPADAHDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAER 199 ND+++ +R +P D +GL L S D R + +KYL ER Sbjct: 141 NDKVIETLRHMPNGDFDLTDMGLDIYPLVSTVD-------RLAAIEQILVRLKYLPSEER 193 Query: 200 QRVIETLERHAGPVGQAEQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRL 259 + ++ L + LM+ + L QAG+EIG HT +HPIL+ L Sbjct: 194 EEQVQALTQRC-----------QKSLSHSLMMTSIQVRQLHQAGMEIGAHTHTHPILASL 242 Query: 260 DDAQARHEICDNKAALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGG 319 A A E+ +KA LE +LG +RLFAYPNGKPG DY Q H + + +EAA +TA G Sbjct: 243 GRASAEQEMATSKARLEDLLGESVRLFAYPNGKPGKDYLQEHADIAQNLNFEAAVSTAWG 302 Query: 320 SAGPEHDCYQIPRGRPWDRRPLMFGLRLL 348 A + D +Q+PR PWDR P F LRLL Sbjct: 303 VASAQSDIWQLPRFTPWDRTPSRFMLRLL 331 >ref|YP_343959.1| polysaccharide deacetylase [Nitrosococcus oceani ATCC 19707] gb|ABA58429.1| Polysaccharide deacetylase [Nitrosococcus oceani ATCC 19707] Length = 339 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 191/329 (58%), Gaps = 18/329 (5%) Query: 20 VLALLLRLGGNLLALGRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVL 79 VL L L L + G+R RL +L YHRVLA PD LL GE D FRWQM+LLA+ F L Sbjct: 13 VLGGLRPLASLLASSGKRARLSVLIYHRVLAAPDALLPGEPDAVQFRWQMELLARYFNPL 72 Query: 80 PLAEALQRLRQNRLPPRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMW 139 PL+EA++RLR+ LPPRAVS+TFDDGY +ALP+LQQ+ +PAT F TG+++ G MW Sbjct: 73 PLSEAVRRLREETLPPRAVSVTFDDGYADNVEVALPILQQVKVPATFFIATGYLDGGWMW 132 Query: 140 NDRILHAVRRLPADAHDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAER 199 ND+++ +R +P D +GL L S D R + +KYL ER Sbjct: 133 NDKVIETLRHMPNGDFDLTDMGLDIYPLVSTVD-------RLAAIEQILVRLKYLPSEER 185 Query: 200 QRVIETLERHAGPVGQAEQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRL 259 + ++ L + LM+ + L QAG+EIG HT +HPIL+ L Sbjct: 186 EEQVQALTQRC-----------QKSLSHSLMMTSIQVRQLHQAGMEIGAHTHTHPILASL 234 Query: 260 DDAQARHEICDNKAALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGG 319 A A E+ +KA LE +LG +RLFAYPNGKPG DY Q H + + +EAA +TA G Sbjct: 235 GRASAEQEMATSKARLEDLLGESVRLFAYPNGKPGKDYLQEHADIAQNLNFEAAVSTAWG 294 Query: 320 SAGPEHDCYQIPRGRPWDRRPLMFGLRLL 348 A + D +Q+PR PWDR P F LRLL Sbjct: 295 VASAQSDIWQLPRFTPWDRTPSRFMLRLL 323 >ref|YP_003461766.1| polysaccharide deacetylase [Thioalkalivibrio sp. K90mix] gb|ADC73030.1| polysaccharide deacetylase [Thioalkalivibrio sp. K90mix] Length = 318 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 194/320 (60%), Gaps = 22/320 (6%) Query: 35 GRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLP 94 GRR RL IL YHRVL PDPL + +FRWQM+LLA+ LPL EA++RL++ RLP Sbjct: 16 GRRARLTILAYHRVLTDPDPLRPEDPVAETFRWQMRLLAREMNPLPLDEAIERLQEGRLP 75 Query: 95 PRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADA 154 RAV++TFDDGY +ALP+L++ G+PAT F TG++ G M+ND ++ VR++P+ A Sbjct: 76 ARAVAVTFDDGYADNAEVALPILREEGVPATFFVATGYLNGGCMFNDMLIETVRQIPSMA 135 Query: 155 HDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERHAG--P 212 D GL L S R+ + L+ A +KY ER R E L G P Sbjct: 136 VDLTPEGLGTRSLDSVAQ------RRSTIHALIGA-LKYRPLTERSRRAEALGARFGVMP 188 Query: 213 VGQAEQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNK 272 G DLM+ + LA AG+ IGGHT HPIL+ D A A+ EI + K Sbjct: 189 PG-------------DLMMTDAQVRELADAGMGIGGHTVLHPILAETDAATAQQEIAEGK 235 Query: 273 AALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPR 332 A LEA++GR +RLFAYPNG+PG DY HV MVR +G+EAA +T G+AG + D Q+PR Sbjct: 236 AELEALVGRPVRLFAYPNGRPGKDYAPEHVEMVRASGFEAAVSTMAGAAGRDTDPLQLPR 295 Query: 333 GRPWDRRPLMFGLRLLRWLA 352 PWDR PL FGLRL R LA Sbjct: 296 FTPWDRTPLRFGLRLARNLA 315 >ref|YP_159470.1| hypothetical protein ebA4315 [Aromatoleum aromaticum EbN1] emb|CAI08569.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 328 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 143/316 (45%), Positives = 184/316 (58%), Gaps = 18/316 (5%) Query: 39 RLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLPPRAV 98 +LCIL +HRVL DPL G+ D +FRWQM+LL++ F VLPL EA RLR+ LP RA Sbjct: 26 KLCILIFHRVLPDADPLRLGDPDANTFRWQMRLLSRHFNVLPLHEAALRLRERCLPARAA 85 Query: 99 SITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADAHDWQ 158 +TFDDGY +T ALP+L++ G+ AT F +T +++ G M+ND ++ VR LP + Sbjct: 86 CVTFDDGYADNYTTALPILREFGISATFFISTAYLDGGRMFNDTLIEVVRGLPEGICNLS 145 Query: 159 ALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERHAGPVGQAEQ 218 ++GL L S D R LA L + KY P ER E L AE Sbjct: 146 SIGLGAVDLVSIAD-------RQALAGTLLGYFKYRPPEERIPAAERL---------AET 189 Query: 219 ADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNKAALEAI 278 D DLM+ L AL +G+EIGGHT SHPIL+ A+AR EIC K LEA+ Sbjct: 190 FDI--DLPTDLMMSSRQLKALHASGMEIGGHTHSHPILALQSPAEARAEICLGKEKLEAL 247 Query: 279 LGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPRGRPWDR 338 LG +R+FAYPNG+P DY Q HVAM+ G++ A +T A D +Q+PR PWDR Sbjct: 248 LGTAIRVFAYPNGRPVKDYGQEHVAMISECGFDVAVSTRPAVADRHCDIHQLPRFTPWDR 307 Query: 339 RPLMFGLRLLRWLARP 354 P F LRLLR L +P Sbjct: 308 TPARFALRLLRTLVQP 323 >ref|NP_840921.1| hypothetical protein NE0847 [Nitrosomonas europaea ATCC 19718] emb|CAD84758.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 316 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 134/317 (42%), Positives = 182/317 (57%), Gaps = 23/317 (7%) Query: 35 GRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLPLAEALQRLRQNRLP 94 G+ +L I+ YHRVL +PD LL GE +A F + L F +LPL+EA+ +LR LP Sbjct: 12 GKNSKLSIVIYHRVLPEPD-LLTGEGGIAQFEKGLSYLTNNFNILPLSEAVNKLRSGTLP 70 Query: 95 PRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPADA 154 RA ITFDDGY +ALP+LQ+ G+ AT F +GF++ G MWND ++ +VRR D Sbjct: 71 GRAACITFDDGYADNAEIALPILQKHGVTATFFIASGFLDGGRMWNDTVIESVRRAKGDK 130 Query: 155 HDWQALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERHAGPVG 214 D A+GL + + + R LL +KYL H Sbjct: 131 LDLNAIGLGNHAIATL-------EQRRETLNLLINKLKYLP-------------HEARAS 170 Query: 215 QAEQADQANQAD--QDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNK 272 Q ++ AD +LM+ + L AG+EIGGHT +HPIL+ +DDA AR EI + K Sbjct: 171 QVDKLSTIIAADLPDNLMMISAQVRQLHDAGMEIGGHTLTHPILASIDDAAARTEIAEGK 230 Query: 273 AALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGGSAGPEHDCYQIPR 332 A LEAI+ LRLFAYPNGKPG DY HV M++ AG+EAA +TA G+A + D +Q+PR Sbjct: 231 AKLEAIIDTPLRLFAYPNGKPGKDYLSAHVKMIKDAGFEAAVSTAWGAARQDSDMFQLPR 290 Query: 333 GRPWDRRPLMFGLRLLR 349 PWD+ + LR++R Sbjct: 291 FTPWDQSEWRYVLRMVR 307