BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0019.p (62 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776141.1| UDP-glucose 4-epimerase [Herbaspirillum sero... 93 1e-17 ref|YP_410971.1| NAD-dependent epimerase/dehydratase [Nitrosospi... 77 7e-13 ref|YP_313857.1| NAD-dependent epimerase/dehydratase [Thiobacill... 77 1e-12 ref|ZP_01288476.1| NAD-dependent epimerase/dehydratase:3-beta hy... 75 4e-12 ref|ZP_05094253.1| NAD dependent epimerase/dehydratase family pr... 74 1e-11 ref|ZP_04922855.1| VI polysaccharide biosynthesis protein VipB/t... 73 2e-11 gb|AAX57448.1| UDP-GlcNAc C4 epimerase [Vibrio vulnificus] 73 2e-11 ref|YP_270311.1| NAD-dependent epimerase/dehydratase family prot... 73 2e-11 ref|ZP_06689988.1| O-antigen biosynthesis protein [Achromobacter... 72 3e-11 gb|EFV85832.1| UDP-N-acetylglucosamine C4 epimerase [Achromobact... 72 4e-11 >ref|YP_003776141.1| UDP-glucose 4-epimerase [Herbaspirillum seropedicae SmR1] emb|CAM32620.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae] gb|ADJ64233.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 43/43 (100%), Positives = 43/43 (100%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATA 43 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATA Sbjct: 209 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATA 251 >ref|YP_410971.1| NAD-dependent epimerase/dehydratase [Nitrosospira multiformis ATCC 25196] gb|ABB73579.1| NAD-dependent epimerase/dehydratase [Nitrosospira multiformis ATCC 25196] Length = 350 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 35/43 (81%), Positives = 39/43 (90%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATA 43 VIPQWV+A+IRN L INGDG+TSRDFCYIDNVVQANLLAA + Sbjct: 209 VIPQWVSALIRNQTLYINGDGETSRDFCYIDNVVQANLLAALS 251 >ref|YP_313857.1| NAD-dependent epimerase/dehydratase [Thiobacillus denitrificans ATCC 25259] gb|AAZ96052.1| NAD-dependent epimerase/dehydratase [Thiobacillus denitrificans ATCC 25259] Length = 342 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/49 (71%), Positives = 41/49 (83%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATAPAALAA 49 VIP+WV +MI + INGDG+TSRDFCYIDNV+QANLLAAT+P A AA Sbjct: 209 VIPKWVASMIHGEPVYINGDGETSRDFCYIDNVIQANLLAATSPHADAA 257 >ref|ZP_01288476.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] gb|EAT05108.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] Length = 344 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/52 (65%), Positives = 41/52 (78%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATAPAALAACAI 52 VIP+W+ AMI+N + INGDG+TSRDFCYIDN VQ NLLAAT+P AA + Sbjct: 209 VIPKWIAAMIQNETVFINGDGETSRDFCYIDNAVQVNLLAATSPNLEAANQV 260 >ref|ZP_05094253.1| NAD dependent epimerase/dehydratase family protein [marine gamma proteobacterium HTCC2148] gb|EEB79463.1| NAD dependent epimerase/dehydratase family protein [marine gamma proteobacterium HTCC2148] Length = 347 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/43 (74%), Positives = 39/43 (90%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATA 43 VIP+W+ AMI N ++ INGDG+TSRDFC+IDNVVQANLLAAT+ Sbjct: 209 VIPKWIAAMISNHDVIINGDGETSRDFCFIDNVVQANLLAATS 251 >ref|ZP_04922855.1| VI polysaccharide biosynthesis protein VipB/tviC [Vibrio sp. Ex25] ref|YP_003284400.1| UDP-glucose 4-epimerase [Vibrio sp. Ex25] gb|EDN56854.1| VI polysaccharide biosynthesis protein VipB/tviC [Vibrio sp. Ex25] gb|ACY49935.1| UDP-glucose 4-epimerase [Vibrio sp. Ex25] Length = 340 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/43 (74%), Positives = 36/43 (83%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATA 43 VIP+W AMI ++ INGDG+TSRDFCYIDNVVQ NLLAATA Sbjct: 209 VIPKWTAAMINGEDVYINGDGETSRDFCYIDNVVQMNLLAATA 251 >gb|AAX57448.1| UDP-GlcNAc C4 epimerase [Vibrio vulnificus] Length = 340 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/43 (72%), Positives = 37/43 (86%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATA 43 VIP+W +AMI N E+ INGDG+TSRDFCYI+NVVQ N+LAAT Sbjct: 209 VIPKWTSAMINNEEVFINGDGETSRDFCYIENVVQMNMLAATG 251 >ref|YP_270311.1| NAD-dependent epimerase/dehydratase family protein [Colwellia psychrerythraea 34H] gb|AAZ24184.1| NAD-dependent epimerase/dehydratase family [Colwellia psychrerythraea 34H] Length = 344 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/46 (69%), Positives = 38/46 (82%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATAPAA 46 VIP+W AMI N EL INGDG+TSRDFC+++N VQAN+LAATA A Sbjct: 213 VIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDA 258 >ref|ZP_06689988.1| O-antigen biosynthesis protein [Achromobacter piechaudii ATCC 43553] gb|EFF73090.1| O-antigen biosynthesis protein [Achromobacter piechaudii ATCC 43553] Length = 341 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 30/44 (68%), Positives = 37/44 (84%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATAP 44 VIP+W AMI+ ++ INGDG+TSRDFC++DN VQANLLAA AP Sbjct: 210 VIPKWTAAMIKGDDVTINGDGETSRDFCFVDNAVQANLLAAMAP 253 >gb|EFV85832.1| UDP-N-acetylglucosamine C4 epimerase [Achromobacter xylosoxidans C54] Length = 341 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 30/45 (66%), Positives = 38/45 (84%) Query: 1 VIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVVQANLLAATAPA 45 VIP+W AMI+ ++ INGDG+TSRDFC++DN VQAN+LAA APA Sbjct: 210 VIPKWTAAMIQGEDVTINGDGETSRDFCFVDNAVQANILAAMAPA 254