BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0015.p (418 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776132.1| diaminopimelate decarboxylase [Herbaspirillu... 805 0.0 ref|YP_004694958.1| pyridoxal-dependent decarboxylase, exosortas... 484 e-134 ref|YP_003760940.1| pyridoxal-dependent decarboxylase, exosortas... 478 e-133 ref|YP_413348.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multi... 478 e-133 ref|ZP_08401053.1| diaminopimelate decarboxylase [Rubrivivax ben... 475 e-132 ref|YP_002355047.1| pyridoxal-dependent decarboxylase [Thauera s... 469 e-130 ref|YP_003527650.1| pyridoxal-dependent decarboxylase, exosortas... 468 e-130 ref|YP_004294020.1| pyridoxal-dependent decarboxylase, exosortas... 467 e-129 ref|YP_343949.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus ocea... 466 e-129 ref|YP_740971.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola eh... 466 e-129 >ref|YP_003776132.1| diaminopimelate decarboxylase [Herbaspirillum seropedicae SmR1] gb|ADJ64224.1| diaminopimelate decarboxylase protein [Herbaspirillum seropedicae SmR1] Length = 418 Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/418 (97%), Positives = 411/418 (98%) Query: 1 MHADPRQKPLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRA 60 MHADPRQKPLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRA LRARVAHLRA Sbjct: 1 MHADPRQKPLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRALLRARVAHLRA 60 Query: 61 HLPAELALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKS 120 HLPAELALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKS Sbjct: 61 HLPAELALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKS 120 Query: 121 LAELRRALAAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAK 180 LAELRRALAAGVMLHVESEREAEAVAALAQELGVR G+TLRINPPFELK SGMRMGGGAK Sbjct: 121 LAELRRALAAGVMLHVESEREAEAVAALAQELGVRPGVTLRINPPFELKSSGMRMGGGAK 180 Query: 181 PFGVDAEVAPALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGL 240 PFGVDAE APALLR LAGQGV+VAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGL Sbjct: 181 PFGVDAEAAPALLRWLAGQGVQVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGL 240 Query: 241 SLRVLNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAG 300 SLRVLNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAG Sbjct: 241 SLRVLNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAG 300 Query: 301 LYVSRVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATE 360 LYVSRVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVP QPQRSGGG TE Sbjct: 301 LYVSRVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPQQPQRSGGGTTE 360 Query: 361 RVSVVGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 RVSVVGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV Sbjct: 361 RVSVVGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 >ref|YP_004694958.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. Is79A3] gb|AEJ01559.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. Is79A3] Length = 411 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 240/410 (58%), Positives = 304/410 (74%), Gaps = 4/410 (0%) Query: 9 PLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPAELAL 68 P HA FP+ D L +GG+ L RLA RVG+TPFY YDR + R+A LR HLPA + L Sbjct: 6 PEHAPLVQFPVRDDCLQIGGIALTRLAQRVGSTPFYAYDREKITERIALLRLHLPAGILL 65 Query: 69 HYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAELRRAL 128 HY++KANPMPA+VQ +A+LVDG DVAS GE+ TALDT + + ISF GPGK ELR A+ Sbjct: 66 HYAMKANPMPAVVQHLAELVDGIDVASAGEMKTALDTTLSPEKISFAGPGKKEHELRSAI 125 Query: 129 AAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGVDAEV 188 A GV+L++ESE+E E VA L + LG+ + +R+NP FELK SGM+M GG+KPFGVDAE Sbjct: 126 ATGVVLNLESEQEMELVAQLGEYLGIVPNVAIRVNPDFELKSSGMKMSGGSKPFGVDAER 185 Query: 189 APALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRVLNIG 248 P +L +L +G+ G IF GSQ+L+A AI + +F+L ++LA A +R+ NIG Sbjct: 186 VPDMLNQLGIRGLNFVGFHIFSGSQNLNATAIQEMHAKTFQLGIRLAEHAPSPVRLFNIG 245 Query: 249 GGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVSRVID 308 GGFG+PYFPG++AL IA IG +L + +P+++ P R+ +E+GRY+V EAG+YV RV++ Sbjct: 246 GGFGVPYFPGDQALNIAAIGENLQRLMPQVKRQLPDARIAIELGRYMVAEAGIYVCRVLE 305 Query: 309 RKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSVVGPL 368 RK SRG+VFLV DGGLHHHLAASGNFGQVIRKNYPV I + G E VSVVGPL Sbjct: 306 RKVSRGQVFLVTDGGLHHHLAASGNFGQVIRKNYPVII----GNKVEGTEREVVSVVGPL 361 Query: 369 CTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 CTPLD+LA QML+ A+ GDLVV+ QSGAYGL+ASPTAFLGHPAP EV+V Sbjct: 362 CTPLDLLADQMLMAKASAGDLVVILQSGAYGLTASPTAFLGHPAPIEVMV 411 >ref|YP_003760940.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus watsonii C-113] gb|ADJ28619.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus watsonii C-113] Length = 410 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 245/413 (59%), Positives = 304/413 (73%), Gaps = 5/413 (1%) Query: 7 QKPL-HAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPAE 65 KPL H+ FP+ D L VGG+PL + A RVG+TPFY Y+R + R+ HLRAHLP+E Sbjct: 2 NKPLPHSPVDYFPVKDDCLLVGGVPLTKFAARVGSTPFYAYERRLISERIRHLRAHLPSE 61 Query: 66 LALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAELR 125 + +HY++KANPMPAL +A LVDG DVAS GEL ALD + + ISF GPGKS AELR Sbjct: 62 IYIHYALKANPMPALAGHIAPLVDGLDVASIGELKIALDAGISPKTISFAGPGKSDAELR 121 Query: 126 RALAAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGVD 185 +LAAG+++++ESE E E +A LA++ G R + +R+NP FELK SGM+M GG KPFG+D Sbjct: 122 TSLAAGIIINMESEGEMERIAHLAEKQGYRPKVAVRVNPNFELKTSGMKMAGGPKPFGID 181 Query: 186 AEVAPALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRVL 245 AE PA+L RL+ ++ G IF GSQ+L A+AI+ AQ +F LAL+LA A +R+L Sbjct: 182 AERVPAMLARLSALDLDFQGFHIFSGSQNLRAEAIIEAQERTFTLALELARSAPAPVRLL 241 Query: 246 NIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVSR 305 NIGGGFGIPYFPG++ L++ PI +LA LP+++ P+ V +E+GRYLVGEAG+YV Sbjct: 242 NIGGGFGIPYFPGDKPLDLRPIADNLAASLPKVQQQLPEAEVTLELGRYLVGEAGIYVCE 301 Query: 306 VIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSVV 365 VIDRK SRG VFL+ +GGLHHHLAASGNFGQVIRKNYPV + R G E SVV Sbjct: 302 VIDRKISRGHVFLITNGGLHHHLAASGNFGQVIRKNYPVVV----GNRVQGSDREIASVV 357 Query: 366 GPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 GPLCTPLD+LA +M L A VGDL+VVFQSGAYG SASP FLGHPAPAEVLV Sbjct: 358 GPLCTPLDILAHRMDLAQAEVGDLIVVFQSGAYGRSASPLGFLGHPAPAEVLV 410 >ref|YP_413348.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] gb|ABB75956.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] Length = 410 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 242/414 (58%), Positives = 301/414 (72%), Gaps = 9/414 (2%) Query: 5 PRQKPLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPA 64 PR P+ F + D L +GG+PL RLA R G TPFY YDR L RVA LR HLPA Sbjct: 6 PRHAPIQ-----FSVNDDCLEIGGLPLTRLAQRAGKTPFYAYDRQRLTDRVAFLRQHLPA 60 Query: 65 ELALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAEL 124 E+ LHY++KANPMPA+VQ MA+LVDG DVAS GE+ ALDTPMP ISF GPGKS +EL Sbjct: 61 EIHLHYAMKANPMPAVVQHMARLVDGLDVASAGEMKVALDTPMPPGEISFAGPGKSDSEL 120 Query: 125 RRALAAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGV 184 A+AAG++L++ESE+E E +A L + LGVR + +R+NP FELK S M+MGGG K FGV Sbjct: 121 SCAIAAGIVLNMESEQEMERIAILGEYLGVRPKVAVRVNPDFELKSSSMKMGGGPKQFGV 180 Query: 185 DAEVAPALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRV 244 DAE PA+L RL ++ G IF GSQ+L A+ A +F+L + LA A +R+ Sbjct: 181 DAERVPAMLARLGRLALDFEGFHIFSGSQNLRVAALQEAHEKTFQLGIALAKHAPAPVRM 240 Query: 245 LNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVS 304 LNIGGGFG PYFPG+ AL++A +G +L + +P +R P+ R+V+E+GRYLV EAG+YV Sbjct: 241 LNIGGGFGTPYFPGDEALDLAAVGENLRRLIPGVRQALPEARIVIELGRYLVAEAGIYVC 300 Query: 305 RVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSV 364 RV++RK+SRG++FL+ DGGLHHHLAASGNFGQVIRKNYPV + R G E VSV Sbjct: 301 RVLERKESRGQIFLITDGGLHHHLAASGNFGQVIRKNYPVMV----GNRVQGTDREVVSV 356 Query: 365 VGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 VGPLCTPLD+LA +M + A GDL+VVFQSGAYGL+ASPTAFL HP P E+LV Sbjct: 357 VGPLCTPLDLLADRMEMSRAEAGDLIVVFQSGAYGLTASPTAFLSHPPPMEMLV 410 >ref|ZP_08401053.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] gb|EGJ09386.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] Length = 415 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 259/414 (62%), Positives = 300/414 (72%), Gaps = 4/414 (0%) Query: 5 PRQKPLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPA 64 PR P+HA FP+ DG L VGG L LA RVGATPFY DR LR RVA LRA LPA Sbjct: 6 PRAVPVHAPMDQFPVRDGELVVGGERLSLLAARVGATPFYAVDRGLLRRRVAELRAALPA 65 Query: 65 ELALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAEL 124 + LHY++KANPMPALV MA LVDG DVASGGEL ALD +SF GPGK AEL Sbjct: 66 GVKLHYAMKANPMPALVAFMAGLVDGIDVASGGELKVALDAGADAAEVSFAGPGKRDAEL 125 Query: 125 RRALAAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGV 184 R+A+AA V+++VESERE +AA A E GV A + +R+NP FELK SGMRMGGGAK FGV Sbjct: 126 RQAVAARVLVNVESERELAVLAAAAAEFGVPARVAVRVNPDFELKGSGMRMGGGAKQFGV 185 Query: 185 DAEVAPALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRV 244 DA+ PALL R+ G+ G +F GSQ+L A+AI AQ S+ELAL+LA A LR Sbjct: 186 DADRVPALLARIGELGLAFEGFHLFAGSQNLRAEAICEAQRQSYELALRLAAHAPAPLRF 245 Query: 245 LNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVS 304 LN+GGGFGIPYFPGE L++APIGA+L R R P+ +V+E+GRY VGEAG+YV+ Sbjct: 246 LNLGGGFGIPYFPGETRLDLAPIGANLQALAERARTELPEASLVIELGRYFVGEAGVYVT 305 Query: 305 RVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSV 364 RV+DRK SRG+VFLV DGGL+HHLAASGNFGQV+RKNYPVT+ R G A E + Sbjct: 306 RVVDRKLSRGQVFLVCDGGLNHHLAASGNFGQVVRKNYPVTV----GNRLGDEARETATA 361 Query: 365 VGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 VGPLCTPLD+LA +M LP A VGDLVVVFQSGAYG SASP AFLGH EVLV Sbjct: 362 VGPLCTPLDLLADRMSLPPADVGDLVVVFQSGAYGASASPQAFLGHAPVTEVLV 415 >ref|YP_002355047.1| pyridoxal-dependent decarboxylase [Thauera sp. MZ1T] gb|ACK54151.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thauera sp. MZ1T] Length = 415 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 249/417 (59%), Positives = 297/417 (71%), Gaps = 3/417 (0%) Query: 1 MHADPRQKPLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRA 60 M+A R P HA QT F I DG L + G PL RLA RVG TPFY YDR + RVA LRA Sbjct: 1 MNAPARSLPTHAPQTVFAIADGELQIAGQPLSRLAARVGRTPFYAYDRGAIARRVAELRA 60 Query: 61 HLPAELALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKS 120 LP + LHY++KANPMPALV +A+LVDG DVAS GEL ALD QH+SF GPGK Sbjct: 61 ALPPAIELHYAMKANPMPALVGHLARLVDGIDVASAGELQVALDAGADPQHVSFAGPGKR 120 Query: 121 LAELRRALAAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAK 180 ELR+A+AAG++++VES RE +A A LGV A + +R+NP FELK SGM+MGGG K Sbjct: 121 DTELRQAVAAGILVNVESFREIAPLAEAAAALGVPARVAVRVNPDFELKSSGMKMGGGPK 180 Query: 181 PFGVDAEVAPALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGL 240 PFGVDAE P LL ++ G+ G +F GSQ+L A+AI+ AQ SFELAL+LA A Sbjct: 181 PFGVDAEQVPGLLAEISRAGLAFEGFHLFAGSQNLKAEAIVEAQRKSFELALRLAAHAPA 240 Query: 241 SLRVLNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAG 300 +R LN+GGGFGIPYFPGE+AL++ PI A LA + P+ R+V+E+GRYLVGEAG Sbjct: 241 PVRTLNLGGGFGIPYFPGEQALDLTPIAAGLADIVAEAAQALPEARIVLELGRYLVGEAG 300 Query: 301 LYVSRVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATE 360 +YV R+ D K SRG +LV DGGLHHHL+ASGNFGQVIRKNYPV I + A E Sbjct: 301 VYVCRITDIKVSRGHTYLVTDGGLHHHLSASGNFGQVIRKNYPVAI---GNRMDAPPAGE 357 Query: 361 RVSVVGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVL 417 SVVGPLCTPLDV+A +M LPAA +GDL+VVFQSGAYG SASP AFLGHP E+L Sbjct: 358 PASVVGPLCTPLDVIADRMPLPAAQIGDLIVVFQSGAYGASASPQAFLGHPQVVEIL 414 >ref|YP_003527650.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus halophilus Nc4] gb|ADE15263.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus halophilus Nc4] Length = 410 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 241/408 (59%), Positives = 294/408 (72%), Gaps = 4/408 (0%) Query: 11 HAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPAELALHY 70 H+ FP+ D L VGG+ L LA RVG+TPFY YDR + R+ LR HLP + LHY Sbjct: 7 HSPLNCFPVKDDCLFVGGISLTELATRVGSTPFYAYDRRLISERIQQLRTHLPPGIHLHY 66 Query: 71 SIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAELRRALAA 130 ++KANPMPALV +A LVDG DVAS GEL ALD+ MP + ISF GPGKS EL +LAA Sbjct: 67 ALKANPMPALVGYLAPLVDGLDVASLGELRLALDSGMPPETISFAGPGKSDNELAASLAA 126 Query: 131 GVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGVDAEVAP 190 G+++++ESE E E +A LA++ G R + +R+NP FELK SGM+M GG KPFG+DAE P Sbjct: 127 GIIINMESEGEMERIARLAEKQGHRPKVAVRVNPNFELKTSGMKMAGGPKPFGIDAERVP 186 Query: 191 ALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRVLNIGGG 250 +L ++ + G IF GSQ+L A+AI+ AQ +F+LAL+LA A +R+LNIGGG Sbjct: 187 PMLTQIGALDFDFYGFHIFSGSQNLRAEAIIEAQERTFKLALELARSAPGPVRLLNIGGG 246 Query: 251 FGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVSRVIDRK 310 FGIPYFPG++ L++ PI +LA LP + P+ V++E+GRYLVGEAG+YV VIDRK Sbjct: 247 FGIPYFPGDKPLDLRPIANNLATSLPEVNKQLPEAEVIIELGRYLVGEAGIYVCEVIDRK 306 Query: 311 QSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSVVGPLCT 370 SRG VFL+ +GGLHHHLAASGNFGQVIRKNYPV + R G A E VSVVGPLCT Sbjct: 307 ISRGHVFLITNGGLHHHLAASGNFGQVIRKNYPVVV----GNRIQGSARETVSVVGPLCT 362 Query: 371 PLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 PLD LA +M L A VGDLVVVFQSGAYG SASP FL HPAPAEVLV Sbjct: 363 PLDTLADRMELACADVGDLVVVFQSGAYGRSASPLGFLSHPAPAEVLV 410 >ref|YP_004294020.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. AL212] gb|ADZ25858.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. AL212] Length = 411 Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust. Identities = 239/413 (57%), Positives = 296/413 (71%), Gaps = 5/413 (1%) Query: 7 QKPL-HAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPAE 65 +PL HA F + D L +GGM L RLA RVG TPFY YDR + RV LR +LP E Sbjct: 3 NQPLEHAPLVQFSVQDDCLQIGGMALTRLADRVGTTPFYAYDRKKITERVELLRQNLPQE 62 Query: 66 LALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAELR 125 + LHY+IKANPMPA+VQ +A LVDG DVAS GE+ ALDT + + ISF GPGK + ELR Sbjct: 63 VLLHYAIKANPMPAVVQHLASLVDGMDVASAGEMRVALDTTLTSEKISFAGPGKKVHELR 122 Query: 126 RALAAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGVD 185 A+AAGV+L++ES +E E +A +LG+ + +RINP FELK SG++M GG+KPFG+D Sbjct: 123 SAIAAGVVLNIESPQEMELIAQQGVDLGMAPKVAIRINPDFELKSSGVKMSGGSKPFGID 182 Query: 186 AEVAPALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRVL 245 AE P +L+RL + G IF GSQ+L+A AI + LA+QLA A S+++L Sbjct: 183 AECVPDVLKRLDLLDLNFVGFHIFSGSQNLNAAAIQESHEKIVMLAIQLAKYAPSSVKLL 242 Query: 246 NIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVSR 305 NIGGGFG+PYFPG++ L+IA IG +L + + R++ P+ V +E+GRYLV EAG+YV R Sbjct: 243 NIGGGFGVPYFPGDQPLDIAAIGVNLQRLIKRIKQQLPETTVALELGRYLVAEAGIYVCR 302 Query: 306 VIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSVV 365 V++RK SRG+VFLV DGGLHHHLAASGN GQVIRKNYPV I + G A E VSVV Sbjct: 303 VLERKASRGQVFLVTDGGLHHHLAASGNLGQVIRKNYPVVI----GNKVQGTAREIVSVV 358 Query: 366 GPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 GPLCTPLDVLA QM + A+V DLVVV QSGAYGL+ASPTAFL HP P EVLV Sbjct: 359 GPLCTPLDVLADQMAMARASVNDLVVVLQSGAYGLTASPTAFLDHPPPIEVLV 411 >ref|YP_343949.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707] gb|ABA58419.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707] Length = 410 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 239/408 (58%), Positives = 293/408 (71%), Gaps = 4/408 (0%) Query: 11 HAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPAELALHY 70 H+ FPI + L VGG+PL A RVG+TPFY Y+R + R+ HLR HLP+E+ +HY Sbjct: 7 HSPLDYFPIKNDCLLVGGVPLTEFAARVGSTPFYAYERRLISERIQHLRTHLPSEIYIHY 66 Query: 71 SIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAELRRALAA 130 ++KANPMPAL +A LVDG DVAS GEL ALDT P + ISF GPGKS AEL +LAA Sbjct: 67 ALKANPMPALAGHIAPLVDGLDVASLGELRVALDTGTPPESISFAGPGKSDAELAASLAA 126 Query: 131 GVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGVDAEVAP 190 G+ +++ESE E E +A LA++ G R + +R+NP FELK SGM+M GG KPFGVDAE P Sbjct: 127 GITINMESEGEMERIAHLAEKQGRRPRVAVRVNPNFELKTSGMKMAGGPKPFGVDAERVP 186 Query: 191 ALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRVLNIGGG 250 A+L R+ ++ G IF GSQ+L A+AI+ AQ +F LAL+LA A +R+LNIGGG Sbjct: 187 AMLARINTLDLDFQGFHIFSGSQNLRAEAIIEAQERTFTLALELARSAPTPVRLLNIGGG 246 Query: 251 FGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVSRVIDRK 310 FGIPYFPG + L++ PI +LA LP+L+ P+ V +E+GRYLVGEAG+YV +IDRK Sbjct: 247 FGIPYFPGNKPLDLRPIADNLAASLPKLQRQIPEAEVTLELGRYLVGEAGIYVCEIIDRK 306 Query: 311 QSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSVVGPLCT 370 SRG VFL+ +GGLHHHLAASGNFGQVIRKNYPV + R G E SVVGPLCT Sbjct: 307 ISRGHVFLITNGGLHHHLAASGNFGQVIRKNYPVVV----GNRIQGSTREIASVVGPLCT 362 Query: 371 PLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 PLD+LA +M L A GDL+VVFQSGAYG SASP FL HP PAEVLV Sbjct: 363 PLDLLADRMELAQAEAGDLIVVFQSGAYGRSASPLGFLSHPVPAEVLV 410 >ref|YP_740971.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1] gb|ABI55481.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1] Length = 411 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 238/412 (57%), Positives = 296/412 (71%), Gaps = 4/412 (0%) Query: 7 QKPLHAEQTAFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRAWLRARVAHLRAHLPAEL 66 Q+P HA F + DGML VGG PL L + G TPFY YDR + RVA LR LP + Sbjct: 4 QRPCHAPMDQFEVADGMLQVGGRPLSDLVQQAGGTPFYAYDRRLMTRRVAALRQTLPEGI 63 Query: 67 ALHYSIKANPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAELRR 126 ALHY+IKANPMPA+VQ MA VDG DVAS GEL ALD + ISF GPGK+ EL Sbjct: 64 ALHYAIKANPMPAVVQHMAGQVDGLDVASAGELRVALDAGVSAADISFAGPGKTDDELAA 123 Query: 127 ALAAGVMLHVESEREAEAVAALAQELGVRAGLTLRINPPFELKFSGMRMGGGAKPFGVDA 186 A+AAG+ +++ES E E +AA+A+++G R + +R+NP FELK SGM+M GGAKPFGVDA Sbjct: 124 AVAAGITINLESATELERLAAIAEKIGHRPHVAVRVNPDFELKTSGMKMSGGAKPFGVDA 183 Query: 187 EVAPALLRRLAGQGVEVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRVLN 246 E PALL+R+A V G IF GSQ+L A+A++ AQ + +LAL+LA +A + +LN Sbjct: 184 EAVPALLKRIAALDVHFRGFHIFSGSQNLRAEALVEAQGLTLDLALRLADDAPGPVEMLN 243 Query: 247 IGGGFGIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVSRV 306 IGGGFGIPYFPG+R L++AP+ L LP +R P + +++E+GRYLVGEAG+YV++V Sbjct: 244 IGGGFGIPYFPGDRRLDLAPVSEQLEARLPAVRERLPGVEIILELGRYLVGEAGIYVAKV 303 Query: 307 IDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPLQPQRSGGGATERVSVVG 366 +DRK SRG FLV +GGLHHHLAASGNFGQVIRKNYPV + R A+E V VVG Sbjct: 304 VDRKVSRGRTFLVTNGGLHHHLAASGNFGQVIRKNYPVAV----GNRMDASASETVDVVG 359 Query: 367 PLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 PLCTPLD+LA Q+ LP A GD +VV+QSGAYG +ASPT FLGHP P E+LV Sbjct: 360 PLCTPLDILAQQVDLPPAQPGDWIVVYQSGAYGYTASPTRFLGHPEPLELLV 411