BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0014.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776131.1| trypsin family periplasmic serine protease [... 478 e-133 ref|YP_413355.1| peptidase S1 and S6, chymotrypsin/Hap [Nitrosos... 271 7e-71 ref|YP_747960.1| peptidase S1 and S6, chymotrypsin/Hap [Nitrosom... 271 9e-71 ref|NP_840466.1| serine protease [Nitrosomonas europaea ATCC 197... 266 2e-69 ref|ZP_01128018.1| Peptidase S1 and S6, chymotrypsin/Hap [Nitroc... 236 3e-60 ref|ZP_08648455.1| Serine protease precursor MucD/AlgY associate... 233 2e-59 ref|YP_285647.1| peptidase S1 and S6, chymotrypsin/Hap [Dechloro... 228 6e-58 ref|YP_003527678.1| peptidase S1 and S6 chymotrypsin/Hap [Nitros... 221 1e-55 ref|YP_934690.1| putative serine protease [Azoarcus sp. BH72] >g... 216 2e-54 ref|YP_003760926.1| peptidase S1 and S6 chymotrypsin/Hap [Nitros... 216 3e-54 >ref|YP_003776131.1| trypsin family periplasmic serine protease [Herbaspirillum seropedicae SmR1] gb|ADJ64223.1| trypsin family periplasmic serine protease protein [Herbaspirillum seropedicae SmR1] Length = 256 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 17 GAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTNAHVVAAA 76 GAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTNAHVVAAA Sbjct: 17 GAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTNAHVVAAA 76 Query: 77 SGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRVGDSDSAR 136 SGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRVGDSDSAR Sbjct: 77 SGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRVGDSDSAR 136 Query: 137 EGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQRSAYPVFQ 196 EGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQRSAYPVFQ Sbjct: 137 EGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQRSAYPVFQ 196 Query: 197 LDGTAYPGFSGSPLYDPESGVVLGVINKVLNATKESAISAPSGITYAIPAKFVQQLMTGR 256 LDGTAYPGFSGSPLYDPESGVVLGVINKVLNATKESAISAPSGITYAIPAKFVQQLMTGR Sbjct: 197 LDGTAYPGFSGSPLYDPESGVVLGVINKVLNATKESAISAPSGITYAIPAKFVQQLMTGR 256 >ref|YP_413355.1| peptidase S1 and S6, chymotrypsin/Hap [Nitrosospira multiformis ATCC 25196] gb|ABB75963.1| Peptidase S1 and S6, chymotrypsin/Hap [Nitrosospira multiformis ATCC 25196] Length = 266 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 139/245 (56%), Positives = 174/245 (71%), Gaps = 4/245 (1%) Query: 10 LLVLCCLGAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTN 69 L VL + A DLV+TI +KP+IVGVG++Q RSPA++F+GTGFV+ DGL VVTN Sbjct: 19 LSVLVLMFATPLWGNDLVKTIERVKPSIVGVGTFQKTRSPALNFLGTGFVLNDGLHVVTN 78 Query: 70 AHVVAAASGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRV 129 AHVV +S V+ +G E R A + +D+ HDLA+LR+SG PA+ + Sbjct: 79 AHVVPEVLDVANHES---YTVITGKGKQGELRSADIAAIDKEHDLAVLRISGEALPAMEL 135 Query: 130 GDSDSAREGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQR 189 GD+ REGQ LAFTGFP+ +LGF+PVTHRAM+S+IT + PA N+R LDAK I QLQ+ Sbjct: 136 GDARKVREGQNLAFTGFPIGMVLGFYPVTHRAMVSSITPIILPAHNSRQLDAKMINQLQK 195 Query: 190 SAYPVFQLDGTAYPGFSGSPLYDPESGVVLGVINKVL-NATKESAISAPSGITYAIPAKF 248 Y VFQLDGTAYPG SGSPLYDPESGVV GVIN V KE+A+S PSGITYAIPA + Sbjct: 196 PIYAVFQLDGTAYPGNSGSPLYDPESGVVYGVINMVFVKGKKEAALSNPSGITYAIPATY 255 Query: 249 VQQLM 253 +Q+L+ Sbjct: 256 IQELL 260 >ref|YP_747960.1| peptidase S1 and S6, chymotrypsin/Hap [Nitrosomonas eutropha C91] gb|ABI59995.1| peptidase S1 and S6, chymotrypsin/Hap [Nitrosomonas eutropha C91] Length = 262 Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 136/252 (53%), Positives = 176/252 (69%), Gaps = 4/252 (1%) Query: 6 LLYSLLVLCCLGAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLT 65 +L S L L ADLV+TI +KPAIVGVGS+ +RSP V+F+GTGFV+ DGL Sbjct: 9 ILRSFLACLILFQSVLCQADLVETIERVKPAIVGVGSFHKLRSPPVNFLGTGFVIEDGLH 68 Query: 66 VVTNAHVVAAASGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEP 125 V+TN HV++ S ++ K+S L ++ +G E R A ++ +D+ HDLALLR GA P Sbjct: 69 VITNVHVISDLSTDKNKNS---LIIITGKGDKPELRNATIVALDKEHDLALLRFEGAALP 125 Query: 126 ALRVGDSDSAREGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIV 185 +++G++ REG++LAFTGFP+ +LGF+PVTHRA IS+IT V PA NAR LDA I Sbjct: 126 VMKLGNASKIREGKLLAFTGFPIGMVLGFYPVTHRATISSITPVILPAQNARQLDAAKIR 185 Query: 186 QLQRSAYPVFQLDGTAYPGFSGSPLYDPESGVVLGVINKVL-NATKESAISAPSGITYAI 244 QLQRSAY VFQLDGTAYPG SGSPLYDP++G V GV+N V KES +S PSGI+YAI Sbjct: 186 QLQRSAYKVFQLDGTAYPGNSGSPLYDPDTGEVYGVVNMVFVKGKKESILSDPSGISYAI 245 Query: 245 PAKFVQQLMTGR 256 P ++ L+ R Sbjct: 246 PGNYIIDLLKTR 257 >ref|NP_840466.1| serine protease [Nitrosomonas europaea ATCC 19718] emb|CAD84290.1| Serine proteases, trypsin family [Nitrosomonas europaea ATCC 19718] Length = 279 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 131/231 (56%), Positives = 171/231 (74%), Gaps = 4/231 (1%) Query: 24 ADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTNAHVVAAASGEERKD 83 ADLV+T+ IKPAIVG+GS+Q + SP V+F+GTGFVV DGL +TNAHV++ S Sbjct: 47 ADLVKTVERIKPAIVGIGSFQKLHSPPVNFLGTGFVVEDGLHAITNAHVISDLSSNT--- 103 Query: 84 SKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRVGDSDSAREGQMLAF 143 SK +L ++ +G E R A ++ +D+ HDLALLR G PA+++GD+ + +EG++LAF Sbjct: 104 SKGSLIIMTGKGEKPELRNATIIALDKEHDLALLRFEGTALPAMKLGDAGTIKEGKLLAF 163 Query: 144 TGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQRSAYPVFQLDGTAYP 203 TGFP+ +LGF+PVTHRA IS+IT V PA NAR LDA I QLQ+SAY +FQLDGTAYP Sbjct: 164 TGFPIGMVLGFYPVTHRATISSITPVILPAQNARQLDAAKIRQLQKSAYKIFQLDGTAYP 223 Query: 204 GFSGSPLYDPESGVVLGVINKV-LNATKESAISAPSGITYAIPAKFVQQLM 253 G SGSPLYDP++G V GV+N V + KES +S PSGI+YAIPA +V L+ Sbjct: 224 GNSGSPLYDPDTGEVYGVVNMVFIKGKKESILSDPSGISYAIPANYVIDLL 274 >ref|ZP_01128018.1| Peptidase S1 and S6, chymotrypsin/Hap [Nitrococcus mobilis Nb-231] gb|EAR21131.1| Peptidase S1 and S6, chymotrypsin/Hap [Nitrococcus mobilis Nb-231] Length = 260 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/244 (50%), Positives = 168/244 (68%), Gaps = 9/244 (3%) Query: 15 CLGAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTNAHVVA 74 LG G A+L TI +K A+VGVG+Y++ R P F GTGF V +G ++TNAHV+ Sbjct: 17 LLGGGVNTHAELADTIERVKTAVVGVGTYESTRRPPAQFRGTGFAVDNGRRIITNAHVLP 76 Query: 75 AASGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRVGDSDS 134 + R++ L V RG +EAR+A + +DR+HDLA+L + GAP P+L++ S+ Sbjct: 77 KSVNSARREY---LAVFQRRGDRLEARKAQRIGLDRVHDLAVLEIKGAPFPSLKIATSEH 133 Query: 135 AREGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQRSAYPV 194 REG + AFTGFP+ AILG +PVTHR +ISAIT +A P ++R LDA+ I L RS + V Sbjct: 134 VREGGLYAFTGFPIGAILGLYPVTHRGIISAITPIAIPVDHSRQLDARMIKSL-RSPFRV 192 Query: 195 FQLDGTAYPGFSGSPLYDPESGVVLGVINKVL-NATKE----SAISAPSGITYAIPAKFV 249 +QLD TAYPG SGSPLYDP+SG V+GVINKV ATKE +AI PSGI+YA+P+ ++ Sbjct: 193 YQLDATAYPGNSGSPLYDPQSGTVIGVINKVFVKATKEAALAAAIEQPSGISYAVPSIYI 252 Query: 250 QQLM 253 ++L+ Sbjct: 253 RKLL 256 >ref|ZP_08648455.1| Serine protease precursor MucD/AlgY associated with sigma factor RpoE [gamma proteobacterium IMCC2047] gb|EGG99123.1| Serine protease precursor MucD/AlgY associated with sigma factor RpoE [gamma proteobacterium IMCC2047] Length = 245 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 124/245 (50%), Positives = 162/245 (66%), Gaps = 7/245 (2%) Query: 10 LLVLCCLGAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTN 69 +LVL A A +L T+A +KP+IVGVG+YQ R+P GTGF V DG VVTN Sbjct: 1 MLVLTLFQT--ASADNLTDTLAKVKPSIVGVGTYQPTRAPQSRLQGTGFAVADGYHVVTN 58 Query: 70 AHVVAAASGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRV 129 AHVV E D K+ L + +G + R+A +LV+D HDLALLR+SG P L++ Sbjct: 59 AHVVKV---ELAVDQKEVLVIFTGKGKRAQFRQARVLVLDEAHDLALLRISGTRLPPLKM 115 Query: 130 GDSDSAREGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQR 189 DS+ REG+ AFTGFPL ILG +P TH+ ++S+IT +A P +R L + I +L R Sbjct: 116 ADSEQVREGERYAFTGFPLGGILGLYPATHQGIVSSITPIAAPMGGSRQLTPELIKRL-R 174 Query: 190 SAYPVFQLDGTAYPGFSGSPLYDPESGVVLGVINKVL-NATKESAISAPSGITYAIPAKF 248 + Y +FQLD TAYPG SGSPLYD SG V+GVIN V TKE+AI PSGITYAIP+++ Sbjct: 175 NGYEIFQLDATAYPGNSGSPLYDQVSGQVVGVINSVFVKGTKEAAIGNPSGITYAIPSRY 234 Query: 249 VQQLM 253 V++L+ Sbjct: 235 VRKLL 239 >ref|YP_285647.1| peptidase S1 and S6, chymotrypsin/Hap [Dechloromonas aromatica RCB] gb|AAZ47177.1| Peptidase S1 and S6, chymotrypsin/Hap [Dechloromonas aromatica RCB] Length = 259 Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 125/250 (50%), Positives = 165/250 (66%), Gaps = 9/250 (3%) Query: 4 LRLLYSLLVLCCLGAGRAGA-ADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGD 62 L+ SLL L L A + A ADL +TI IKP+IV VGSY+ SPA + GTGFVVG+ Sbjct: 8 LKHFSSLLCLAGLLASPSSASADLAETIEKIKPSIVVVGSYKKTSSPAFTLRGTGFVVGN 67 Query: 63 GLTVVTNAHVVAAASGEERKDSKDNLRVLVARGAN--VEAREAALLVMDRLHDLALLRLS 120 G V TNAHVVA E+ D + V+ AR N ++ R A + D+ HDLA+LR+ Sbjct: 68 GNLVATNAHVVA-----EQSDPDGPILVIQARATNGDIQLRRAQKIASDKDHDLAILRVE 122 Query: 121 GAPEPALRVGDSDSAREGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLD 180 G+P P + D+ REGQ +AFTGFP+ LGF PVTHR +ISAIT +A P NA+ L+ Sbjct: 123 GSPLPPFHLADNYRVREGQAVAFTGFPIGGALGFSPVTHRGIISAITPIAIPGGNAQQLN 182 Query: 181 AKAIVQLQRSAYPVFQLDGTAYPGFSGSPLYDPESGVVLGVINKV-LNATKESAISAPSG 239 K I +L+ + + QLD TAYPG SGSP++DPE+G VLG+IN V + +KE+ +S PSG Sbjct: 183 EKLIQRLKSGTFDILQLDATAYPGNSGSPVFDPETGEVLGIINMVFIKGSKEAILSQPSG 242 Query: 240 ITYAIPAKFV 249 ITYAIP +++ Sbjct: 243 ITYAIPVRYL 252 >ref|YP_003527678.1| peptidase S1 and S6 chymotrypsin/Hap [Nitrosococcus halophilus Nc4] gb|ADE15291.1| peptidase S1 and S6 chymotrypsin/Hap [Nitrosococcus halophilus Nc4] Length = 260 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 112/231 (48%), Positives = 157/231 (67%), Gaps = 6/231 (2%) Query: 24 ADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTNAHVVAAASGEERKD 83 A L +TI IK A+VGVG+Y + R S+ GTGFVV +G VVTNAHV+ + + D Sbjct: 28 ASLPETIEHIKQAVVGVGTYASTRGAQASYRGTGFVVANGRYVVTNAHVLPS-----QLD 82 Query: 84 SKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRVGDSDSAREGQMLAF 143 SK N R+ V G R A + +D +HDLALL++ G+P P + +G++ REG+ +AF Sbjct: 83 SKRNERIAVFVGVKGLLRRAKKVAVDTVHDLALLKIEGSPLPPMSLGNTSQVREGESIAF 142 Query: 144 TGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQRSAYPVFQLDGTAYP 203 TGFP+ A+LG HPVTHR ++SAIT +AT ++ L+ + I L++ ++ VFQLD TAYP Sbjct: 143 TGFPIGAVLGLHPVTHRGIVSAITPIATAGRTSQDLNPQRIQHLRQRSFKVFQLDATAYP 202 Query: 204 GFSGSPLYDPESGVVLGVINKVL-NATKESAISAPSGITYAIPAKFVQQLM 253 G SGSP+YDP++G VLGV+N V +KE+ + PSGITYAIP +V+ L+ Sbjct: 203 GNSGSPVYDPDTGQVLGVVNMVFVKGSKENVLKNPSGITYAIPVDYVKALL 253 >ref|YP_934690.1| putative serine protease [Azoarcus sp. BH72] emb|CAL95804.1| conserved hypothetical serine protease [Azoarcus sp. BH72] Length = 264 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 121/255 (47%), Positives = 164/255 (64%), Gaps = 7/255 (2%) Query: 5 RLLYSLL--VLCCLGAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGD 62 R L S L +LC L ADL + IKP++V +G+YQ RSPA F+GTGFVVG+ Sbjct: 11 RFLTSALAVLLCALTVAPTAHADLADLLPRIKPSVVAIGTYQRTRSPAFRFLGTGFVVGN 70 Query: 63 GLTVVTNAHVVAAASGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGA 122 G TV TNAHV+ ++ ++ + VL + AR+A + DR HDLALLRL G Sbjct: 71 GRTVATNAHVIPDTLATDQLEAL--VVVLPGQEPGQTARQATRIATDRNHDLALLRLEGE 128 Query: 123 PE-PALRVGDSDSAREGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDA 181 PAL +G+++ REGQ +AFTGFP+ LG PVTHR +I+AIT + P NAR L+ Sbjct: 129 QRLPALPLGEAE-VREGQQIAFTGFPIGNALGVTPVTHRGIIAAITPIGIPQGNARDLNP 187 Query: 182 KAIVQLQRSAYPVFQLDGTAYPGFSGSPLYDPESGVVLGVINKVL-NATKESAISAPSGI 240 + +L A+ V+QLD TAYPG SGSPL+DP +G V+G++N V +TKES +S PSGI Sbjct: 188 TLVRRLGGGAFLVYQLDATAYPGNSGSPLFDPNTGTVIGIVNMVFVKSTKESVLSDPSGI 247 Query: 241 TYAIPAKFVQQLMTG 255 +YAIP + ++ L+ G Sbjct: 248 SYAIPVEHLRALLAG 262 >ref|YP_003760926.1| peptidase S1 and S6 chymotrypsin/Hap [Nitrosococcus watsonii C-113] gb|ADJ28605.1| peptidase S1 and S6 chymotrypsin/Hap [Nitrosococcus watsonii C-113] Length = 262 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 117/244 (47%), Positives = 160/244 (65%), Gaps = 9/244 (3%) Query: 11 LVLCCLGAGRAGAADLVQTIAAIKPAIVGVGSYQAMRSPAVSFVGTGFVVGDGLTVVTNA 70 L+ + + RAG LV TI +K A+VGVG+Y ++R + GTGFVV DG VVTNA Sbjct: 20 LLFLMVTSSRAG---LVDTIEHVKRAVVGVGTYASIRGVQAHYRGTGFVVADGRHVVTNA 76 Query: 71 HVVAAASGEERKDSKDNLRVLVARGANVEAREAALLVMDRLHDLALLRLSGAPEPALRVG 130 HV+ + ER N + V G + R A +V+D +HDLALL++ G+ L +G Sbjct: 77 HVLPSELNSER-----NEYIAVFVGVKGQVRRAEKVVVDAIHDLALLKIGGSSLSFLSLG 131 Query: 131 DSDSAREGQMLAFTGFPLTAILGFHPVTHRAMISAITVVATPAPNARSLDAKAIVQLQRS 190 + REG+ +AFTGFP+ +LG +PVTHR +ISAIT VAT ++ L+ + I QL+R Sbjct: 132 NPSQVREGEGVAFTGFPIGPVLGLYPVTHRGIISAITPVATAGRASQDLNPQRIQQLRRQ 191 Query: 191 AYPVFQLDGTAYPGFSGSPLYDPESGVVLGVINKVL-NATKESAISAPSGITYAIPAKFV 249 + VFQLD TAYPG SGSP+YDP++G VLGV+NKV +KE+ + PSGITYAIPA +V Sbjct: 192 PFKVFQLDATAYPGNSGSPVYDPDTGRVLGVVNKVFVKGSKENVLKHPSGITYAIPANYV 251 Query: 250 QQLM 253 + L+ Sbjct: 252 KALL 255