BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0005.p (112 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776122.1| alkylphosphonate uptake protein [Herbaspiril... 233 6e-60 ref|YP_004681165.1| alkylphosphonate uptake [Cupriavidus necator... 198 2e-49 ref|YP_586979.1| alkylphosphonate utilization operon protein Phn... 195 1e-48 ref|YP_001353985.1| alkylphosphonate uptake protein [Janthinobac... 194 3e-48 ref|ZP_00946881.1| PhnA protein [Ralstonia solanacearum UW551] >... 193 6e-48 ref|YP_003748613.1| alkylphosphonate utilization operon protein ... 193 8e-48 gb|AEG71325.1| phna protein alkylphosphonate uptake [Ralstonia s... 192 1e-47 ref|NP_522940.1| PHNA protein alkylphosphonate uptake [Ralstonia... 192 2e-47 ref|YP_003980390.1| PhnA family protein [Achromobacter xylosoxid... 191 3e-47 ref|YP_003750309.1| alkylphosphonate utilization operon protein ... 191 3e-47 >ref|YP_003776122.1| alkylphosphonate uptake protein [Herbaspirillum seropedicae SmR1] gb|ADJ64214.1| alkylphosphonate uptake protein [Herbaspirillum seropedicae SmR1] Length = 112 Score = 233 bits (595), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAAPAAEQARVWRDASGNVLQDGDTVT 60 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAAPAAEQARVWRDASGNVLQDGDTVT Sbjct: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAAPAAEQARVWRDASGNVLQDGDTVT 60 Query: 61 VIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRKA 112 VIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRKA Sbjct: 61 VIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRKA 112 >ref|YP_004681165.1| alkylphosphonate uptake [Cupriavidus necator N-1] gb|AEI79933.1| alkylphosphonate uptake [Cupriavidus necator N-1] Length = 113 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 93/112 (83%), Positives = 101/112 (90%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAA-PAAEQARVWRDASGNVLQDGDTV 59 MS LP CP+C SE+TYEDGG Y+CPECAHEWSAQAA P +ARV+RDA+GNVLQDGDTV Sbjct: 1 MSALPPCPKCHSEFTYEDGGLYICPECAHEWSAQAAAPTEPEARVYRDAAGNVLQDGDTV 60 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG GVVKMGTKVKNIRLVDGDHDIDCKIDGFG+M LK+EFVRK Sbjct: 61 TVIKDLKLKGAAGVVKMGTKVKNIRLVDGDHDIDCKIDGFGAMSLKSEFVRK 112 >ref|YP_586979.1| alkylphosphonate utilization operon protein PhnA [Cupriavidus metallidurans CH34] gb|ABF11710.1| alkylphosphonate utilization operon protein PhnA [Cupriavidus metallidurans CH34] Length = 130 Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 91/112 (81%), Positives = 99/112 (88%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQA-APAAEQARVWRDASGNVLQDGDTV 59 MS LPACP C SEYTYEDGG ++CPECAHEWSAQA APA + RV RD++GNVLQDGDTV Sbjct: 18 MSALPACPNCHSEYTYEDGGLFICPECAHEWSAQASAPAEAEVRVHRDSAGNVLQDGDTV 77 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG G +KMGTKVKNIRLVDGDHDIDCKIDGFG+M LK+EFVRK Sbjct: 78 TVIKDLKLKGSAGTIKMGTKVKNIRLVDGDHDIDCKIDGFGAMSLKSEFVRK 129 >ref|YP_001353985.1| alkylphosphonate uptake protein [Janthinobacterium sp. Marseille] gb|ABR89335.1| alkylphosphonate uptake protein [Janthinobacterium sp. Marseille] Length = 113 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 91/112 (81%), Positives = 101/112 (90%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAAP-AAEQARVWRDASGNVLQDGDTV 59 MS LPACPQC SE+TYEDGG Y+CPECAHEWSAQAA A EQA+V+RDA G VLQDGDTV Sbjct: 1 MSNLPACPQCNSEFTYEDGGLYICPECAHEWSAQAATEAVEQAKVYRDAVGAVLQDGDTV 60 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 T+IKDLKLKG GGV+K+GTKVKNIRLVD DHDIDCKIDGFG+M LK+EFV+K Sbjct: 61 TIIKDLKLKGSGGVLKVGTKVKNIRLVDSDHDIDCKIDGFGAMSLKSEFVKK 112 >ref|ZP_00946881.1| PhnA protein [Ralstonia solanacearum UW551] ref|YP_002257264.1| phna protein alkylphosphonate uptake [Ralstonia solanacearum IPO1609] gb|EAP70629.1| PhnA protein [Ralstonia solanacearum UW551] emb|CAQ37172.1| phna protein alkylphosphonate uptake [Ralstonia solanacearum MolK2] emb|CAQ59147.1| phna protein alkylphosphonate uptake [Ralstonia solanacearum IPO1609] Length = 113 Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 90/112 (80%), Positives = 99/112 (88%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQA-APAAEQARVWRDASGNVLQDGDTV 59 MSTLP CP+C SE+TYEDGG Y+CPECAHEWSAQA APA RV+RD++GNVLQDGDTV Sbjct: 1 MSTLPPCPKCHSEFTYEDGGVYICPECAHEWSAQATAPAETAGRVYRDSAGNVLQDGDTV 60 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG GV+KMGTKVKNIRLVD DHDIDCKIDG G+M LK+EFVRK Sbjct: 61 TVIKDLKLKGSAGVIKMGTKVKNIRLVDSDHDIDCKIDGLGAMSLKSEFVRK 112 >ref|YP_003748613.1| alkylphosphonate utilization operon protein PhnA [Ralstonia solanacearum CFBP2957] emb|CBJ54233.1| alkylphosphonate utilization operon protein PhnA [Ralstonia solanacearum CFBP2957] Length = 113 Score = 193 bits (490), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 90/112 (80%), Positives = 99/112 (88%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQA-APAAEQARVWRDASGNVLQDGDTV 59 MSTLP CP+C SE+TYEDGG Y+CPECAHEWSAQA APA RV+RD++GNVLQDGDTV Sbjct: 1 MSTLPPCPKCHSEFTYEDGGVYICPECAHEWSAQADAPAETAGRVYRDSAGNVLQDGDTV 60 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG GV+KMGTKVKNIRLVD DHDIDCKIDG G+M LK+EFVRK Sbjct: 61 TVIKDLKLKGSAGVIKMGTKVKNIRLVDSDHDIDCKIDGLGAMSLKSEFVRK 112 >gb|AEG71325.1| phna protein alkylphosphonate uptake [Ralstonia solanacearum Po82] Length = 150 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 89/112 (79%), Positives = 98/112 (87%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQA-APAAEQARVWRDASGNVLQDGDTV 59 MSTLP CP+C SE+TYEDGG Y+CPECAHEWSAQ APA RV+RD++GNVLQDGDTV Sbjct: 38 MSTLPPCPKCHSEFTYEDGGVYICPECAHEWSAQVTAPAETAGRVYRDSAGNVLQDGDTV 97 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG GV+KMGTKVKNIRLVD DHDIDCKIDG G+M LK+EFVRK Sbjct: 98 TVIKDLKLKGSAGVIKMGTKVKNIRLVDSDHDIDCKIDGLGAMSLKSEFVRK 149 >ref|NP_522940.1| PHNA protein alkylphosphonate uptake [Ralstonia solanacearum GMI1000] emb|CAD18532.1| probable phna protein alkylphosphonate uptake [Ralstonia solanacearum GMI1000] emb|CBJ41043.1| alkylphosphonate utilization operon protein PhnA [Ralstonia solanacearum CMR15] Length = 113 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 89/112 (79%), Positives = 99/112 (88%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAAPAAEQA-RVWRDASGNVLQDGDTV 59 MSTLP CP+C SE+TYEDGG Y+CPECAHEWS QAA AE A RV+RD++GNVLQDGDTV Sbjct: 1 MSTLPPCPKCHSEFTYEDGGVYICPECAHEWSTQAAAPAETAERVYRDSAGNVLQDGDTV 60 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG GV+KMGTKVKNIRLVD DHDIDCKIDG G+M LK+EFV+K Sbjct: 61 TVIKDLKLKGSAGVIKMGTKVKNIRLVDSDHDIDCKIDGLGAMSLKSEFVKK 112 >ref|YP_003980390.1| PhnA family protein [Achromobacter xylosoxidans A8] gb|ADP17675.1| PhnA family protein [Achromobacter xylosoxidans A8] Length = 113 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 89/112 (79%), Positives = 101/112 (90%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAAPAA-EQARVWRDASGNVLQDGDTV 59 MS LPACP+C+SEYTYEDG YVCPECAHEWS+QAA ++ E A+V+RD++GNVLQDGDTV Sbjct: 1 MSALPACPKCKSEYTYEDGALYVCPECAHEWSSQAAESSDEAAKVYRDSAGNVLQDGDTV 60 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG GGV+KMGTKVK IRLVD DHDIDCKIDGFG M LK+EFV+K Sbjct: 61 TVIKDLKLKGSGGVIKMGTKVKGIRLVDSDHDIDCKIDGFGPMSLKSEFVKK 112 >ref|YP_003750309.1| alkylphosphonate utilization operon protein phna [Ralstonia solanacearum PSI07] emb|CBJ35685.1| putative alkylphosphonate utilization operon protein PhnA [Ralstonia solanacearum PSI07] emb|CCA86930.1| putative alkylphosphonate utilization operon protein PhnA [Ralstonia syzygii R24] Length = 113 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 89/112 (79%), Positives = 98/112 (87%), Gaps = 1/112 (0%) Query: 1 MSTLPACPQCQSEYTYEDGGQYVCPECAHEWSAQAAPAAEQA-RVWRDASGNVLQDGDTV 59 MS LP CP+C SE+TYEDGG Y+CPECAHEWSAQAA AE RV+RD++GNVLQDGDTV Sbjct: 1 MSALPPCPKCNSEFTYEDGGVYICPECAHEWSAQAAAPAETVDRVYRDSAGNVLQDGDTV 60 Query: 60 TVIKDLKLKGGGGVVKMGTKVKNIRLVDGDHDIDCKIDGFGSMGLKTEFVRK 111 TVIKDLKLKG GV+KMGTKVKNIRLVD DHDIDCKIDG G+M LK+EFVRK Sbjct: 61 TVIKDLKLKGSAGVIKMGTKVKNIRLVDSDHDIDCKIDGLGAMSLKSEFVRK 112