BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0055.p         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773510.1| RNA methyltransferase [Herbaspirillum serope...   846   0.0  
ref|ZP_08275426.1| Ribosomal RNA small subunit methyltransferase...   552   e-155
ref|YP_001351848.1| tRNA and rRNA cytosine-C5-methylases [Janthi...   545   e-153
ref|YP_004751232.1| ribosomal RNA small subunit methyltransferas...   540   e-151
emb|CAL60368.2| putative 16S rRNA methyltransferase B [Herminiim...   518   e-145
ref|YP_001098497.1| putative S-adenosyl-L-methionine-dependent R...   518   e-144
ref|ZP_04579593.1| tRNA and rRNA cytosine-C5-methylase [Oxalobac...   460   e-127
ref|ZP_04577439.1| tRNA and rRNA cytosine-C5-methylase [Oxalobac...   459   e-127
ref|YP_004226580.1| sun protein [Burkholderia sp. CCGE1001] >gi|...   454   e-125
ref|YP_001893962.1| sun protein [Burkholderia phytofirmans PsJN]...   451   e-124

>ref|YP_003773510.1| RNA methyltransferase [Herbaspirillum seropedicae SmR1]
 gb|ADJ61602.1| RNA methyltransferase (SUN protein) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 424

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/424 (99%), Positives = 424/424 (100%)

Query: 16  LAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLTESLL 75
           +AYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLTESLL
Sbjct: 1   MAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLTESLL 60

Query: 76  GLLANKPPQPEVLHGLLVTALALLVNEEESGYDSFTVVDQAVQAAAISPEMSFAKGVVNA 135
           GLLANKPPQPEVLHGLLVTALALLVNEEESGYDSFTVVDQAVQAAAISPEMSFAKGVVNA
Sbjct: 61  GLLANKPPQPEVLHGLLVTALALLVNEEESGYDSFTVVDQAVQAAAISPEMSFAKGVVNA 120

Query: 136 ILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPLTLRVN 195
           ILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPLTLRVN
Sbjct: 121 ILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPLTLRVN 180

Query: 196 RRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQLAAPL 255
           RRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQLAAPL
Sbjct: 181 RRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQLAAPL 240

Query: 256 LDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKARLTTG 315
           LDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKARLTTG
Sbjct: 241 LDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKARLTTG 300

Query: 316 DARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQILDKLWQM 375
           DARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQILDKLWQM
Sbjct: 301 DARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQILDKLWQM 360

Query: 376 LRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHDGLFYALFQ 435
           LRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHDGLFYALFQ
Sbjct: 361 LRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHDGLFYALFQ 420

Query: 436 KPGA 439
           KPGA
Sbjct: 421 KPGA 424


>ref|ZP_08275426.1| Ribosomal RNA small subunit methyltransferase B [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF31091.1| Ribosomal RNA small subunit methyltransferase B [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 437

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 292/429 (68%), Positives = 335/429 (78%), Gaps = 3/429 (0%)

Query: 12  KADSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLT 71
           K DSLA+ L  AA AVA VR G ALPQAL ++   +D    ARGAIQD++YRAMR LG  
Sbjct: 7   KPDSLAFSLRSAAHAVALVRGGTALPQALTRVQGYADTSGQARGAIQDIAYRAMRGLGRA 66

Query: 72  ESLLGLLANKPPQPEVLHGLLVTALALLVNEEE---SGYDSFTVVDQAVQAAAISPEMSF 128
           ++L+ LL ++ P+P  LHGLL  AL L+  +E    + Y+ FTVV+QAV+AA+  P M+ 
Sbjct: 67  DALVTLLTSRAPEPAALHGLLCCALTLIDRDESDLPAPYEIFTVVNQAVEAASADPAMAH 126

Query: 129 AKGVVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAP 188
           AKG+VNA+LRR LRERATL+ +  + P   WNYP WWID ++ AYP+QWQAILHAGN AP
Sbjct: 127 AKGMVNAVLRRFLRERATLLAEVLRQPVAEWNYPGWWIDTMRNAYPQQWQAILHAGNAAP 186

Query: 189 PLTLRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAA 248
           PL LRVN+RRTT   YL  L    + ARQVGP A+RL RPVPV Q+PGF EG+VSVQDAA
Sbjct: 187 PLILRVNQRRTTPDAYLALLADQQILARQVGPDAIRLERPVPVLQIPGFMEGLVSVQDAA 246

Query: 249 AQLAAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQL 308
           AQLAAPLLD  DGMRVLDACAAPGGKTGHLLE A LDL ALD D RRL+RI ENL RLQL
Sbjct: 247 AQLAAPLLDARDGMRVLDACAAPGGKTGHLLERAQLDLIALDSDPRRLKRIEENLQRLQL 306

Query: 309 KARLTTGDARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQI 368
            ARL  GDA A DWWDG+PFDRILADVPCTASGI+RRHPDIRWLRRK DTAQLA LS++I
Sbjct: 307 TARLVAGDAAATDWWDGKPFDRILADVPCTASGILRRHPDIRWLRRKADTAQLAALSSRI 366

Query: 369 LDKLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHDG 428
           LD LW+ML PDGKLL VTCSLWPQESE QA AFA ++ A RLPAPGQLLP A+   DHDG
Sbjct: 367 LDNLWRMLAPDGKLLFVTCSLWPQESEAQAAAFAMRNQAERLPAPGQLLPMATSNEDHDG 426

Query: 429 LFYALFQKP 437
           LFYALF+KP
Sbjct: 427 LFYALFRKP 435


>ref|YP_001351848.1| tRNA and rRNA cytosine-C5-methylases [Janthinobacterium sp.
           Marseille]
 gb|ABR89606.1| tRNA and rRNA cytosine-C5-methylases [Janthinobacterium sp.
           Marseille]
          Length = 437

 Score =  545 bits (1404), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 292/429 (68%), Positives = 341/429 (79%), Gaps = 4/429 (0%)

Query: 12  KADSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLT 71
           K DSL++ L  AAQAVAAV  G ALPQALAQIF+++ A   ARGAIQDLSY  MR +G  
Sbjct: 6   KPDSLSFSLHGAAQAVAAVGRGVALPQALAQIFAQTHATPQARGAIQDLSYHCMRHIGRA 65

Query: 72  ESLLGLLANKPPQPEVLHGLLVTALALLVN----EEESGYDSFTVVDQAVQAAAISPEMS 127
           E+LL  +  K  +P +LHGLL  ALAL+ +    E E+ Y +FTVVDQAV AAA  P+M+
Sbjct: 66  EALLNAMTTKQTEPAILHGLLCCALALISDPDEAESEARYSAFTVVDQAVTAAAADPDMA 125

Query: 128 FAKGVVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQA 187
            AKG+VNA+LRR LRER  L+  A  T    WNYP WWIDR+++AYP+ WQAIL AGN A
Sbjct: 126 HAKGMVNAVLRRFLRERDALLKSAGGTQFARWNYPDWWIDRMRSAYPQNWQAILEAGNAA 185

Query: 188 PPLTLRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDA 247
           PPLTLRVNRR+TTV  YL  L +  +AA ++GP AV+L +P PV Q+PGF EG+VSVQDA
Sbjct: 186 PPLTLRVNRRKTTVDAYLALLAEQSVAATRIGPDAVKLAQPTPVGQIPGFNEGLVSVQDA 245

Query: 248 AAQLAAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQ 307
           AAQLAA LLD+ DGMRVLDACAAPGGK+GH+LE AD++L ALD++ RR+ RIAENL+RLQ
Sbjct: 246 AAQLAASLLDLRDGMRVLDACAAPGGKSGHILESADVELIALDNEARRMPRIAENLERLQ 305

Query: 308 LKARLTTGDARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQ 367
           L+A L TGDA A DWWDG+PFDRILADVPCTASGIVRRHPDIRWLRRK DT QLA +S  
Sbjct: 306 LQATLLTGDASATDWWDGKPFDRILADVPCTASGIVRRHPDIRWLRRKGDTTQLAAISAT 365

Query: 368 ILDKLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHD 427
           ILD LWQML+PDGKLL VTCSLWPQESE QA AFA ++NA RLPAPGQLLPTA+  +DHD
Sbjct: 366 ILDNLWQMLQPDGKLLFVTCSLWPQESEAQAAAFAVRNNATRLPAPGQLLPTANAESDHD 425

Query: 428 GLFYALFQK 436
           GLFYALFQK
Sbjct: 426 GLFYALFQK 434


>ref|YP_004751232.1| ribosomal RNA small subunit methyltransferase B [Collimonas
           fungivorans Ter331]
 gb|AEK60409.1| Ribosomal RNA small subunit methyltransferase B [Collimonas
           fungivorans Ter331]
          Length = 436

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 299/429 (69%), Positives = 350/429 (81%), Gaps = 4/429 (0%)

Query: 12  KADSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLT 71
           K DSLA+ L  AAQA+A VR G ALPQAL Q+F++S APAP RGAIQD++YR MR +G  
Sbjct: 7   KKDSLAFSLLGAAQAIALVRDGAALPQALTQVFAQSAAPAPTRGAIQDIAYRTMRGIGRA 66

Query: 72  ESLLGLLANKPPQPEVLHGLLVTALALLVNEEESGYDSFTVVDQAVQAAAISPEMSFAKG 131
           E+LLG LA++PP+P +LH LL  AL LL + ++  Y++FTVV+QAV A +  P+M+ AKG
Sbjct: 67  ETLLGNLASRPPEPTLLHCLLCAALCLLADVDDPAYENFTVVNQAVTAVSSDPQMAHAKG 126

Query: 132 VVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPLT 191
           +VNA+LRR LRER TL+  A KTP G WNYP WWIDR+KAAYP+QWQAIL AGN APPLT
Sbjct: 127 MVNAVLRRFLRERETLVAAAIKTPFGLWNYPVWWIDRMKAAYPQQWQAILTAGNAAPPLT 186

Query: 192 LRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQL 251
           LRVNRR+T+VA YLDTL    + ARQ+GP A+RL   +PV Q+PGF +G+ SVQDAAAQL
Sbjct: 187 LRVNRRKTSVAAYLDTLASHAITARQIGPDAIRLDTAMPVAQIPGFEDGLASVQDAAAQL 246

Query: 252 AAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKAR 311
           AAPLLD+ DGMRVLDACAAPGGKTGH+LE AD++L ALD++ +RL RI +NL RLQL+A+
Sbjct: 247 AAPLLDLQDGMRVLDACAAPGGKTGHILESADVELTALDNNPKRLLRITQNLQRLQLEAK 306

Query: 312 LTTGDA----RADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQ 367
           L  GDA    +  DWWDGQ FDRILADVPCTASGIVRRHPDIRWLRRKTDT QLATLS +
Sbjct: 307 LQLGDAGTGSQGGDWWDGQLFDRILADVPCTASGIVRRHPDIRWLRRKTDTEQLATLSAK 366

Query: 368 ILDKLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHD 427
           ILD LWQMLRPDGKLLLVTCS+WPQESE QA AFA ++NA RLPAPGQLLPTA    DHD
Sbjct: 367 ILDNLWQMLRPDGKLLLVTCSVWPQESEAQAAAFAARNNARRLPAPGQLLPTADAQHDHD 426

Query: 428 GLFYALFQK 436
           GLFYALFQK
Sbjct: 427 GLFYALFQK 435


>emb|CAL60368.2| putative 16S rRNA methyltransferase B [Herminiimonas
           arsenicoxydans]
          Length = 453

 Score =  518 bits (1333), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 287/431 (66%), Positives = 335/431 (77%), Gaps = 4/431 (0%)

Query: 12  KADSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLT 71
           K DSL++ L  AAQAVA V  G ALPQ+LA+IF++++A   ARGAIQD+SY  MR +G  
Sbjct: 22  KPDSLSFTLHGAAQAVADVGRGIALPQSLARIFAQTNATPQARGAIQDISYHCMRHIGRA 81

Query: 72  ESLLGLLANKPPQPEVLHGLLVTALALLVNEEE--SG--YDSFTVVDQAVQAAAISPEMS 127
           E+LL  +  K  +P +LHGLL  ALAL+ + EE  SG  Y +FTVVDQAV AAA   +M+
Sbjct: 82  EALLNAMTTKQTEPPILHGLLCCALALISDPEEAVSGARYSAFTVVDQAVTAAAADTDMA 141

Query: 128 FAKGVVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQA 187
            AKG+VNAILRR LRER  LM  A  T    WNYP WWIDR+++AYP  WQAIL AGN A
Sbjct: 142 HAKGMVNAILRRFLRERDALMKSAAGTQLARWNYPDWWIDRMRSAYPRDWQAILEAGNAA 201

Query: 188 PPLTLRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDA 247
           PPLTLRVN+R+ +V+ YL  L Q G+AA  +GP AVRL +P PV Q+PGF++G+VSVQDA
Sbjct: 202 PPLTLRVNQRKISVSDYLALLAQQGIAATLIGPVAVRLAQPTPVNQIPGFSDGLVSVQDA 261

Query: 248 AAQLAAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQ 307
           AAQLAAPLLD+ DGMRVLDACAAPGGK+GH+LE A ++L ALD D RRL RI ENL RLQ
Sbjct: 262 AAQLAAPLLDLRDGMRVLDACAAPGGKSGHILETAVVELTALDSDERRLPRITENLQRLQ 321

Query: 308 LKARLTTGDARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQ 367
           L A L  GDA  + WWDG+PF+RILADVPCTASGIVRRHPDIRWLRRK+D  QLA +S Q
Sbjct: 322 LNASLLVGDATGNSWWDGKPFERILADVPCTASGIVRRHPDIRWLRRKSDAVQLAAISAQ 381

Query: 368 ILDKLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHD 427
           ILD LWQML+ DGKLL VTCSLWPQESE QA AFA ++ AIRLPAPGQLLPTA+   DHD
Sbjct: 382 ILDNLWQMLQADGKLLFVTCSLWPQESEAQAAAFAVRNRAIRLPAPGQLLPTANAEDDHD 441

Query: 428 GLFYALFQKPG 438
           GLFYALFQK G
Sbjct: 442 GLFYALFQKSG 452


>ref|YP_001098497.1| putative S-adenosyl-L-methionine-dependent RNA methyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 449

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/431 (66%), Positives = 335/431 (77%), Gaps = 4/431 (0%)

Query: 12  KADSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLT 71
           K DSL++ L  AAQAVA V  G ALPQ+LA+IF++++A   ARGAIQD+SY  MR +G  
Sbjct: 18  KPDSLSFTLHGAAQAVADVGRGIALPQSLARIFAQTNATPQARGAIQDISYHCMRHIGRA 77

Query: 72  ESLLGLLANKPPQPEVLHGLLVTALALLVNEEE--SG--YDSFTVVDQAVQAAAISPEMS 127
           E+LL  +  K  +P +LHGLL  ALAL+ + EE  SG  Y +FTVVDQAV AAA   +M+
Sbjct: 78  EALLNAMTTKQTEPPILHGLLCCALALISDPEEAVSGARYSAFTVVDQAVTAAAADTDMA 137

Query: 128 FAKGVVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQA 187
            AKG+VNAILRR LRER  LM  A  T    WNYP WWIDR+++AYP  WQAIL AGN A
Sbjct: 138 HAKGMVNAILRRFLRERDALMKSAAGTQLARWNYPDWWIDRMRSAYPRDWQAILEAGNAA 197

Query: 188 PPLTLRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDA 247
           PPLTLRVN+R+ +V+ YL  L Q G+AA  +GP AVRL +P PV Q+PGF++G+VSVQDA
Sbjct: 198 PPLTLRVNQRKISVSDYLALLAQQGIAATLIGPVAVRLAQPTPVNQIPGFSDGLVSVQDA 257

Query: 248 AAQLAAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQ 307
           AAQLAAPLLD+ DGMRVLDACAAPGGK+GH+LE A ++L ALD D RRL RI ENL RLQ
Sbjct: 258 AAQLAAPLLDLRDGMRVLDACAAPGGKSGHILETAVVELTALDSDERRLPRITENLQRLQ 317

Query: 308 LKARLTTGDARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQ 367
           L A L  GDA  + WWDG+PF+RILADVPCTASGIVRRHPDIRWLRRK+D  QLA +S Q
Sbjct: 318 LNASLLVGDATGNSWWDGKPFERILADVPCTASGIVRRHPDIRWLRRKSDAVQLAAISAQ 377

Query: 368 ILDKLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHD 427
           ILD LWQML+ DGKLL VTCSLWPQESE QA AFA ++ AIRLPAPGQLLPTA+   DHD
Sbjct: 378 ILDNLWQMLQADGKLLFVTCSLWPQESEAQAAAFAVRNRAIRLPAPGQLLPTANAEDDHD 437

Query: 428 GLFYALFQKPG 438
           GLFYALFQK G
Sbjct: 438 GLFYALFQKSG 448


>ref|ZP_04579593.1| tRNA and rRNA cytosine-C5-methylase [Oxalobacter formigenes OXCC13]
 gb|EEO30566.1| tRNA and rRNA cytosine-C5-methylase [Oxalobacter formigenes OXCC13]
          Length = 443

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/426 (58%), Positives = 313/426 (73%), Gaps = 3/426 (0%)

Query: 14  DSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLTES 73
           +SLA++L   A AVA V  G +LP ALA +FS     A  RGAIQD++Y   R LGL E 
Sbjct: 17  ESLAFRLLGTAHAVARVEEGQSLPSALASVFSHPKMDAATRGAIQDIAYLTERKLGLCEF 76

Query: 74  LLGLLANKPPQPEVLHGLLVTALALLVNEEESG---YDSFTVVDQAVQAAAISPEMSFAK 130
           L+  L  +PP P +L  LL ++LALLV E +     Y+ +T VDQAV+AAA    +  AK
Sbjct: 77  LIEQLTRQPPSPPLLKTLLASSLALLVGENDEADLKYEPYTTVDQAVEAAASEGTLVRAK 136

Query: 131 GVVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPL 190
           G+VNA+LRR LRE+  L+ ++  +    WNYP+WWI   +  YP+ W++ILH GN APPL
Sbjct: 137 GLVNAVLRRFLREKEILLEKSNLSLTAKWNYPSWWIKETRRIYPKNWESILHVGNTAPPL 196

Query: 191 TLRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQ 250
           TLRVN+R+TTV  YL  L+ AG  A  +GP A+RL  P+PV ++PGF+EG+VSVQDAAAQ
Sbjct: 197 TLRVNKRKTTVEGYLADLEAAGHPATAIGPYAIRLDNPLPVYRIPGFSEGLVSVQDAAAQ 256

Query: 251 LAAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKA 310
           LAAPLL++ DGMRVLDACAAPGGK+GH+LE+AD+DL ALD +  RL++I ENL RLQL A
Sbjct: 257 LAAPLLELQDGMRVLDACAAPGGKSGHMLEMADIDLHALDSEPERLKKIDENLTRLQLHA 316

Query: 311 RLTTGDARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQILD 370
            +  GDA   +WWDG  FD ILADVPCTASGI+RRHPDIRWLRR  D  +LA +S +ILD
Sbjct: 317 TIMAGDASKKNWWDGNAFDCILADVPCTASGIIRRHPDIRWLRRPEDAKELAVISARILD 376

Query: 371 KLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHDGLF 430
            LW++L+P GKLLL TCS+WP ESE QA AFA+++NA RL APGQL PT+ +  DHDGLF
Sbjct: 377 NLWELLKPGGKLLLATCSVWPLESEWQADAFAKRNNAARLDAPGQLFPTSDKLKDHDGLF 436

Query: 431 YALFQK 436
           YALF+K
Sbjct: 437 YALFKK 442


>ref|ZP_04577439.1| tRNA and rRNA cytosine-C5-methylase [Oxalobacter formigenes HOxBLS]
 gb|EEO28401.1| tRNA and rRNA cytosine-C5-methylase [Oxalobacter formigenes HOxBLS]
          Length = 441

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/424 (58%), Positives = 310/424 (73%), Gaps = 1/424 (0%)

Query: 14  DSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRSDAPAPARGAIQDLSYRAMRSLGLTES 73
           +SLA++LA AA AV  V  G +LP AL  +FS   A A ARGAIQD++Y  +R LGL   
Sbjct: 17  ESLAFRLAGAADAVTRVAKGQSLPDALTAVFSDVSADAAARGAIQDIAYHTLRQLGLVSF 76

Query: 74  LLGLLANKPPQPEVLHGLLVTALALLVNEEES-GYDSFTVVDQAVQAAAISPEMSFAKGV 132
           L   L  +PP+P +L  LL  ALALL+ E  +  Y+ +T VDQAV+AAA    +  AKG+
Sbjct: 77  LTRKLTTRPPEPVMLQSLLHCALALLIPENNTLRYEPYTTVDQAVEAAAAIRVLRKAKGL 136

Query: 133 VNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPLTL 192
           VNA+LRR LRE+   +  A +    +WNYP WWI++ + AYP  W+ IL AGN  PPLTL
Sbjct: 137 VNAVLRRFLREQPNFLKAARQDSEASWNYPGWWIEQAQQAYPVHWKTILSAGNGVPPLTL 196

Query: 193 RVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQLA 252
           RVN R+TTV  YL+  + AG+    +GP AV+L +P+PV ++PGF EG+VSVQDAAAQLA
Sbjct: 197 RVNVRKTTVNDYLELAEAAGIGCMAIGPYAVKLIQPIPVNRIPGFMEGLVSVQDAAAQLA 256

Query: 253 APLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKARL 312
           APLL + DGM+VLDACAAPGGK GH+LE+A +DL ALD D RRL+ I ENL+RL L+A +
Sbjct: 257 APLLGLEDGMKVLDACAAPGGKAGHMLEMAHIDLLALDRDRRRLRMIQENLERLGLRADI 316

Query: 313 TTGDARADDWWDGQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQILDKL 372
            TGDA   DWWD   FD ILADVPCTASGI+RRHPDIRWLRR++D+ +L+ +S +IL  L
Sbjct: 317 KTGDATRSDWWDKSLFDCILADVPCTASGIIRRHPDIRWLRRQSDSHELSLVSARILKNL 376

Query: 373 WQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKHNAIRLPAPGQLLPTASETADHDGLFYA 432
           W ML+P GKLLL TCS+WP+ESE+QA AFA    A+RLPAPGQLLPT +   DHDGLFYA
Sbjct: 377 WPMLKPGGKLLLATCSIWPEESERQAEAFAAYSGALRLPAPGQLLPTVNGMNDHDGLFYA 436

Query: 433 LFQK 436
           LF+K
Sbjct: 437 LFKK 440


>ref|YP_004226580.1| sun protein [Burkholderia sp. CCGE1001]
 gb|ADX53520.1| sun protein [Burkholderia sp. CCGE1001]
          Length = 479

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/451 (55%), Positives = 301/451 (66%), Gaps = 29/451 (6%)

Query: 14  DSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRS--DAPAPARGAIQDLSYRAMRSLGLT 71
           +SL + L  AAQAV AVR G ALP AL  +F  +   + A ARGA+QD++YR MR  G  
Sbjct: 29  ESLGFALDCAAQAVGAVRLGAALPAALQSVFVSAPEGSAAAARGAVQDIAYRTMRRFGTA 88

Query: 72  ESLLGLLANKPPQPEVLHGLLVTALALLVNEEESG-YDSFTVVDQAVQAAAISPEMSFAK 130
           E L+  L  K P P V H +L  ALALL+++E S  Y  FTVVDQAV+A +   E SFAK
Sbjct: 89  EWLIARLVKKAPPPHVGH-VLACALALLIDDEASAAYTPFTVVDQAVRAISARREFSFAK 147

Query: 131 GVVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPL 190
           G+VNA+LR  LRER  L+ +A       WNYPTWWID ++ A+P+ WQ +L AGN   PL
Sbjct: 148 GLVNAVLRNFLRERDVLLTEAQADEVAHWNYPTWWIDAVRRAWPDAWQDVLAAGNTQGPL 207

Query: 191 TLRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQ 250
           TLRVN R +TV  YL  L+Q  +AA +VG  AV+L  P+PV ++PGF EGVVSVQDA AQ
Sbjct: 208 TLRVNARHSTVEAYLHVLEQHHIAASKVGEYAVKLATPMPVDRIPGFNEGVVSVQDAGAQ 267

Query: 251 LAAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKA 310
           LAA LL V DGMRVLDACAAPGGKTGHLLELA+L L AL+ D  R +RI ENL RL+L+A
Sbjct: 268 LAAQLLGVRDGMRVLDACAAPGGKTGHLLELANLQLVALESDVSRARRIGENLQRLKLEA 327

Query: 311 RLTTGDARADDWWD---GQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQ 367
            +  GDA A   W     QPFDRILADVPC+ASGIVRRHPDIRWLRR +D   L     +
Sbjct: 328 EVRIGDAGAPSKWHDDIDQPFDRILADVPCSASGIVRRHPDIRWLRRASDIPALVEAQRR 387

Query: 368 ILDKLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKH-NAIRLPAPGQLLP-------- 418
           ILD LW +++P G+LL VTCS++P+E E QA  F  KH +A+RL APGQLLP        
Sbjct: 388 ILDALWPLVKPGGELLYVTCSIFPEEGELQAQWFGNKHQDAVRLDAPGQLLPSVARAPAD 447

Query: 419 -------------TASETADHDGLFYALFQK 436
                        +A   +DHDG FYA FQK
Sbjct: 448 PSAGSHAGEFAERSAGTNSDHDGFFYARFQK 478


>ref|YP_001893962.1| sun protein [Burkholderia phytofirmans PsJN]
 gb|ACD14738.1| sun protein [Burkholderia phytofirmans PsJN]
          Length = 457

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/451 (54%), Positives = 301/451 (66%), Gaps = 29/451 (6%)

Query: 14  DSLAYQLAYAAQAVAAVRAGHALPQALAQIFSRS--DAPAPARGAIQDLSYRAMRSLGLT 71
           +SL + L  A QAV AVR G ALP AL  +F+ +     A ARGA+QD++YR MR L   
Sbjct: 7   ESLGFALDCAGQAVGAVRLGAALPAALQSVFASAPEGNAAAARGAVQDIAYRTMRRLATA 66

Query: 72  ESLLGLLANKPPQPEVLHGLLVTALALLVNEE-ESGYDSFTVVDQAVQAAAISPEMSFAK 130
           E L+  L  K P P V H +L  +LALLV++E ++ Y  FTVVDQAV A     E +FAK
Sbjct: 67  EWLIAKLVKKAPPPHVGH-VLACSLALLVDDEADAAYAPFTVVDQAVSAIGARREFAFAK 125

Query: 131 GVVNAILRRLLRERATLMPQATKTPPGTWNYPTWWIDRLKAAYPEQWQAILHAGNQAPPL 190
           G+VNA+LR  LRER  L+  A       WNYP WWID +K A+P+ WQ++L AGN   PL
Sbjct: 126 GLVNAVLRSFLREREALLKDAQDDEVARWNYPAWWIDAVKRAWPDAWQSVLAAGNTQGPL 185

Query: 191 TLRVNRRRTTVAQYLDTLQQAGMAARQVGPAAVRLHRPVPVQQLPGFAEGVVSVQDAAAQ 250
           TLRVN R +TV  YL TLQ   +AA +VG  AV+L  P+PV ++PGF +GVVSVQDA AQ
Sbjct: 186 TLRVNARHSTVDAYLQTLQNHHIAASKVGDYAVKLATPMPVDRIPGFNDGVVSVQDAGAQ 245

Query: 251 LAAPLLDVADGMRVLDACAAPGGKTGHLLELADLDLQALDHDTRRLQRIAENLDRLQLKA 310
           LAAPLLD  DGMRVLDACAAPGGKTGHLLELA+L L AL+ D  R +RI ENL RL+L+A
Sbjct: 246 LAAPLLDARDGMRVLDACAAPGGKTGHLLELANLQLVALESDASRARRIGENLQRLKLEA 305

Query: 311 RLTTGDARADDWWD---GQPFDRILADVPCTASGIVRRHPDIRWLRRKTDTAQLATLSTQ 367
            +  GDA A   W     QPFDRILADVPC+ASGIVRRHPDIRWLRR +D   L T   +
Sbjct: 306 EVRIGDAGAPAKWHDDIDQPFDRILADVPCSASGIVRRHPDIRWLRRASDIPALVTEQRR 365

Query: 368 ILDKLWQMLRPDGKLLLVTCSLWPQESEQQAVAFAQKH-NAIRLPAPGQLLPTASE---- 422
           ILD LW +++P G+LL VTCS++P+E E QA  F  K+ +A+RL APGQLLP+A+     
Sbjct: 366 ILDALWPLVKPGGELLYVTCSIFPEEGELQAQWFGNKYQDAVRLDAPGQLLPSAARAPAD 425

Query: 423 -----------------TADHDGLFYALFQK 436
                             +DHDG FYA FQK
Sbjct: 426 TSAGSHAGQPAEDSAGANSDHDGFFYARFQK 456