BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0044.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773501.1| glutamine ABC transporter periplasmic protei... 520 e-146 ref|YP_003366320.1| periplasmic solute-binding protein of ABC tr... 364 9e-99 ref|YP_001436688.1| hypothetical protein ESA_00562 [Cronobacter ... 359 3e-97 ref|YP_003018907.1| family 3 extracellular solute-binding protei... 358 4e-97 ref|ZP_07949482.1| extracellular solute-binding protein [Enterob... 358 8e-97 ref|YP_003211662.1| Histidine-binding protein [Cronobacter turic... 357 9e-97 gb|AEJ98582.1| amino acid-binding protein [Klebsiella pneumoniae... 357 1e-96 ref|YP_051625.1| amino acid-binding protein [Pectobacterium atro... 356 2e-96 ref|YP_003260855.1| extracellular solute-binding protein family ... 356 3e-96 ref|YP_001335757.1| amino acid-binding protein [Klebsiella pneum... 355 3e-96 >ref|YP_003773501.1| glutamine ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ61593.1| ABC-type glutamine transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 259 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 41 MSLKKLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKA 100 MSLKKLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKA Sbjct: 1 MSLKKLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKA 60 Query: 101 ISQASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIIT 160 ISQASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIIT Sbjct: 61 ISQASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIIT 120 Query: 161 NADAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDA 220 NADAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDA Sbjct: 121 NADAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDA 180 Query: 221 AVGDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGT 280 AVGDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGT Sbjct: 181 AVGDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGT 240 Query: 281 YAKIYKTWFDGDVPTLPLK 299 YAKIYKTWFDGDVPTLPLK Sbjct: 241 YAKIYKTWFDGDVPTLPLK 259 >ref|YP_003366320.1| periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] emb|CBG89534.1| putative periplasmic solute-binding protein of ABC transporter [Citrobacter rodentium ICC168] Length = 255 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 178/255 (69%), Positives = 207/255 (81%), Gaps = 3/255 (1%) Query: 43 LKKLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKAIS 102 K + +AL+ G A+AA +TYVVGAGGTYRPFEFE +K+L GFDID+IKAI+ Sbjct: 2 FSKWMKAGCLMMALT---GAAMAAQETYVVGAGGTYRPFEFENSQKQLEGFDIDIIKAIA 58 Query: 103 QASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIITNA 162 +A NF+++LV+TPWEGIFATLG GDRDIIISGITITDKR QMVDFS PYFPAEQ I+ A Sbjct: 59 KAENFEVKLVNTPWEGIFATLGSGDRDIIISGITITDKRKQMVDFSHPYFPAEQSIVVPA 118 Query: 163 DAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDAAV 222 + +TSL LK +V VVNS+ GDIVVS LGK STAI RFDNT LML+EL+ GV AAV Sbjct: 119 GSTVTSLDSLKNEKVGVVNSSTGDIVVSGVLGKNSTAIKRFDNTPLMLQELFEDGVSAAV 178 Query: 223 GDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGTYA 282 GDVGV+K+YI+ HPEK+FK+V D+KF RQYFGIAV KGN ELL KINAGLKKI+ADGTY Sbjct: 179 GDVGVVKYYIRQHPEKQFKLVPDAKFERQYFGIAVAKGNTELLQKINAGLKKIIADGTYD 238 Query: 283 KIYKTWFDGDVPTLP 297 KIYKTWFD +VPTLP Sbjct: 239 KIYKTWFDSEVPTLP 253 >ref|YP_001436688.1| hypothetical protein ESA_00562 [Cronobacter sakazakii ATCC BAA-894] gb|ABU75852.1| hypothetical protein ESA_00562 [Cronobacter sakazakii ATCC BAA-894] Length = 260 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 172/230 (74%), Positives = 197/230 (85%) Query: 68 QTYVVGAGGTYRPFEFETPKKELVGFDIDLIKAISQASNFKIQLVSTPWEGIFATLGQGD 127 +TYVVGAGGTYRPFEFE +K+L GFDID+IKAI++A NF ++LV+TPWEGIFATLG GD Sbjct: 29 ETYVVGAGGTYRPFEFENSQKQLEGFDIDIIKAIAKAENFNVKLVNTPWEGIFATLGSGD 88 Query: 128 RDIIISGITITDKRAQMVDFSLPYFPAEQVIITNADAKITSLSDLKKTQVAVVNSTAGDI 187 RDIIISGITITDKR QMVDFS PYFPAEQ I+ AD+K+ SL+ LK +V VVNS+ GDI Sbjct: 89 RDIIISGITITDKRKQMVDFSAPYFPAEQSIVVAADSKVDSLAALKNEKVGVVNSSTGDI 148 Query: 188 VVSEELGKASTAIHRFDNTVLMLEELYRGGVDAAVGDVGVIKFYIKSHPEKKFKVVGDSK 247 VVS+ LGK +TAI RFDNT LML+EL+ GV AAVGDVGV+K+YIK HPEK+FK+V D+K Sbjct: 149 VVSDVLGKNNTAIKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQHPEKQFKLVPDAK 208 Query: 248 FVRQYFGIAVKKGNKELLDKINAGLKKIVADGTYAKIYKTWFDGDVPTLP 297 F RQYFGIAV KGN EL DKINAGL KIVADGTYAKIYK WFD +VPTLP Sbjct: 209 FERQYFGIAVAKGNDELRDKINAGLAKIVADGTYAKIYKAWFDDNVPTLP 258 >ref|YP_003018907.1| family 3 extracellular solute-binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gb|ACT14371.1| extracellular solute-binding protein family 3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 261 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 177/258 (68%), Positives = 208/258 (80%), Gaps = 3/258 (1%) Query: 43 LKKLL---TTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIK 99 KKLL A+AL+ + +A AA+ TYVVG+GGTYRPFEFE +KEL GFDID+IK Sbjct: 2 FKKLLFVGALCATALSTTVLPTSAFAAEPTYVVGSGGTYRPFEFENAQKELEGFDIDIIK 61 Query: 100 AISQASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVII 159 AI++A NF I+LV+TPWEGIFATL GDRDIIISGITITDKR QMVDFS PYFPAEQ I+ Sbjct: 62 AIAKAENFNIKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQMVDFSAPYFPAEQSIV 121 Query: 160 TNADAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVD 219 + I S++ LK +V VVNS+ D+VVS+ LGK ST+I RFDNT LML+ELY GV Sbjct: 122 VPKGSTIDSIAALKDHKVGVVNSSTADVVVSDVLGKNSTSIKRFDNTPLMLQELYEDGVG 181 Query: 220 AAVGDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADG 279 AAVGDVGV+KFYIK+HPEK+F +V D+KF RQYFGIAV KGN +L +KINAGLKKIVADG Sbjct: 182 AAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLREKINAGLKKIVADG 241 Query: 280 TYAKIYKTWFDGDVPTLP 297 TYAKIY+TWFD +VPTLP Sbjct: 242 TYAKIYQTWFDNNVPTLP 259 >ref|ZP_07949482.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gb|EFV41916.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 256 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 176/257 (68%), Positives = 208/257 (80%), Gaps = 2/257 (0%) Query: 43 LKKLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKAIS 102 LKK++ A A + +G +AA QTYVVG+GGTYRPFEFE +K+L GFDID+IKAI+ Sbjct: 2 LKKMIL--AGCFAAAMVSGMTMAAQQTYVVGSGGTYRPFEFENSQKQLEGFDIDIIKAIA 59 Query: 103 QASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIITNA 162 +A NF I+LV+TPWEGIFATL GDRDIIISGITITDKR +MVDFS PYFPAEQ I+ + Sbjct: 60 KAENFDIKLVNTPWEGIFATLSSGDRDIIISGITITDKRQKMVDFSTPYFPAEQSIVVPS 119 Query: 163 DAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDAAV 222 +K+ S++ LK +V VVNS+ GDIVVS+ LGK ST I RFDNT LML+ELY G+ AAV Sbjct: 120 GSKVDSVNALKGQKVGVVNSSTGDIVVSDVLGKNSTDIKRFDNTPLMLQELYEDGLGAAV 179 Query: 223 GDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGTYA 282 GDVGV+K+YIK+HPEK FK+V DSKF RQYFGIAV KGN+ELL KINAGL+KIVADGTYA Sbjct: 180 GDVGVVKYYIKNHPEKAFKLVPDSKFERQYFGIAVAKGNQELLGKINAGLQKIVADGTYA 239 Query: 283 KIYKTWFDGDVPTLPLK 299 KIY WFD +VP LP K Sbjct: 240 KIYTQWFDANVPVLPTK 256 >ref|YP_003211662.1| Histidine-binding protein [Cronobacter turicensis z3032] emb|CBA33212.1| Histidine-binding protein [Cronobacter turicensis z3032] Length = 265 Score = 357 bits (917), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 170/230 (73%), Positives = 197/230 (85%) Query: 68 QTYVVGAGGTYRPFEFETPKKELVGFDIDLIKAISQASNFKIQLVSTPWEGIFATLGQGD 127 +TYVVGAGGTYRPFEFE +KEL GFDID+IKAI++A NF ++LV+TPWEGIFATLG GD Sbjct: 34 ETYVVGAGGTYRPFEFENSQKELEGFDIDIIKAIAKAENFNVKLVNTPWEGIFATLGSGD 93 Query: 128 RDIIISGITITDKRAQMVDFSLPYFPAEQVIITNADAKITSLSDLKKTQVAVVNSTAGDI 187 RDI++SGITITDKR QMVDFS PYFPAEQ I+ AD+K+ SL+ LK +V VVNS+ GDI Sbjct: 94 RDILVSGITITDKRKQMVDFSAPYFPAEQSIVVPADSKVNSLAALKNEKVGVVNSSTGDI 153 Query: 188 VVSEELGKASTAIHRFDNTVLMLEELYRGGVDAAVGDVGVIKFYIKSHPEKKFKVVGDSK 247 VVS+ LGK +TAI RFDNT LML+EL+ GV AAVGDVGV+K+YIK HPEK+FK+V D+K Sbjct: 154 VVSDVLGKNNTAIKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQHPEKQFKLVPDAK 213 Query: 248 FVRQYFGIAVKKGNKELLDKINAGLKKIVADGTYAKIYKTWFDGDVPTLP 297 F RQYFGIAV KGN EL +KINAGL KIVADGTYAKIYK WFD +VPTLP Sbjct: 214 FERQYFGIAVAKGNDELRNKINAGLAKIVADGTYAKIYKAWFDDNVPTLP 263 >gb|AEJ98582.1| amino acid-binding protein [Klebsiella pneumoniae KCTC 2242] Length = 255 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 177/253 (69%), Positives = 204/253 (80%), Gaps = 2/253 (0%) Query: 45 KLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKAISQA 104 K L A +A A G A A +TY VG+GGTYRPFEFE +K+L GFDID+IKAI++A Sbjct: 3 KNLLKACCMIAALTAVGQAAA--ETYTVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAKA 60 Query: 105 SNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIITNADA 164 F ++LV+TPWEGIFATL GDRDIIISGITITDKR QMVDFS PYFPAEQ I+ D+ Sbjct: 61 EGFDVKLVNTPWEGIFATLNTGDRDIIISGITITDKRKQMVDFSAPYFPAEQSIVVAQDS 120 Query: 165 KITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDAAVGD 224 ++ SL+ LK +V VVNS+ GDIVVSE LGK STAI RFDNT LML+EL+ GV AAVGD Sbjct: 121 QVDSLAALKNEKVGVVNSSTGDIVVSEVLGKNSTAIKRFDNTPLMLQELFEDGVSAAVGD 180 Query: 225 VGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGTYAKI 284 VGV+K+YIK HPEK+FK+V D+KF RQYFGIAV KGN ELL KINAGL+KIVADGTYAKI Sbjct: 181 VGVVKYYIKQHPEKQFKLVPDAKFERQYFGIAVAKGNSELLGKINAGLQKIVADGTYAKI 240 Query: 285 YKTWFDGDVPTLP 297 YKTWFD +VPTLP Sbjct: 241 YKTWFDDNVPTLP 253 >ref|YP_051625.1| amino acid-binding protein [Pectobacterium atrosepticum SCRI1043] emb|CAG76435.1| amino acid-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 261 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 175/258 (67%), Positives = 208/258 (80%), Gaps = 3/258 (1%) Query: 43 LKKLLTTAA---SALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIK 99 KKLL A +AL+ + + + AA+ TYVVG+GGTYRPFEFE +K+L GFDID+IK Sbjct: 2 FKKLLCVGALFATALSTTVLSTSTFAAEPTYVVGSGGTYRPFEFENAQKQLEGFDIDIIK 61 Query: 100 AISQASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVII 159 AI++A NF I+L++TPWEGIFATL GDRDIIISGITITDKR QMVDFS PYFPAEQ I+ Sbjct: 62 AIAKAENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQMVDFSAPYFPAEQSIV 121 Query: 160 TNADAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVD 219 + I S++ LK +V VVNS+ DIVVS+ LGK ST+I RFDNT LML+ELY GV Sbjct: 122 IPKGSTIDSIAALKDHKVGVVNSSTADIVVSDVLGKNSTSIKRFDNTPLMLQELYEDGVG 181 Query: 220 AAVGDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADG 279 AAVGDVGV+KFYIK+HPEK+F +V D+KF RQYFGIAV KGN +L +KINAGLKKIVADG Sbjct: 182 AAVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDKLREKINAGLKKIVADG 241 Query: 280 TYAKIYKTWFDGDVPTLP 297 TYAKIY+TWFD +VPTLP Sbjct: 242 TYAKIYQTWFDNNVPTLP 259 >ref|YP_003260855.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] gb|ACX89248.1| extracellular solute-binding protein family 3 [Pectobacterium wasabiae WPP163] Length = 256 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 177/257 (68%), Positives = 206/257 (80%), Gaps = 3/257 (1%) Query: 41 MSLKKLLTTAASALALSCAAGTALAADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKA 100 M K L A A ALS +A AA+ TYVVG+GGTYRPFEFE +KEL GFDID+IKA Sbjct: 1 MFKKLLFVGALFATALST---SAFAAEPTYVVGSGGTYRPFEFENAQKELEGFDIDIIKA 57 Query: 101 ISQASNFKIQLVSTPWEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIIT 160 +++A NF I+L++TPWEGIFATL GDRDIIISGITITDKR QMVDFS PYFPAEQ I+ Sbjct: 58 VAKAENFNIKLINTPWEGIFATLNSGDRDIIISGITITDKRKQMVDFSAPYFPAEQSIVV 117 Query: 161 NADAKITSLSDLKKTQVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDA 220 + I S++ LK +V VVNS+ DIVVS+ LGK ST+I RFDNT LML+ELY GV A Sbjct: 118 PKGSTIDSIAALKAHKVGVVNSSTADIVVSDVLGKNSTSIKRFDNTPLMLQELYEDGVGA 177 Query: 221 AVGDVGVIKFYIKSHPEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGT 280 AVGDVGV+KFYIK+HPEK+F +V D+KF RQYFGIAV KGN +L +KINAGLKKIVADGT Sbjct: 178 AVGDVGVVKFYIKTHPEKQFNLVSDAKFERQYFGIAVAKGNDQLREKINAGLKKIVADGT 237 Query: 281 YAKIYKTWFDGDVPTLP 297 YAKIY+TWFD +VPTLP Sbjct: 238 YAKIYQTWFDNNVPTLP 254 >ref|YP_001335757.1| amino acid-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gb|ABR77527.1| amino acid-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 245 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 175/242 (72%), Positives = 202/242 (83%), Gaps = 2/242 (0%) Query: 58 CAAGTAL--AADQTYVVGAGGTYRPFEFETPKKELVGFDIDLIKAISQASNFKIQLVSTP 115 AA TA+ AA +TY VG+GGTYRPFEFE +K+L GFDID+IKAI++A F ++LV+TP Sbjct: 2 IAALTAVGQAAAETYTVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAKAEGFDVKLVNTP 61 Query: 116 WEGIFATLGQGDRDIIISGITITDKRAQMVDFSLPYFPAEQVIITNADAKITSLSDLKKT 175 WEGIFATL GDRDIIISGITITDKR QMVDFS PYFPAEQ I+ D+++ SL+ LK Sbjct: 62 WEGIFATLNTGDRDIIISGITITDKRKQMVDFSAPYFPAEQSIVVAQDSQVDSLAALKNE 121 Query: 176 QVAVVNSTAGDIVVSEELGKASTAIHRFDNTVLMLEELYRGGVDAAVGDVGVIKFYIKSH 235 +V VVNS+ GDIVVSE LGK STAI RFDNT LML+EL+ GV AAVGDVGV+K+YIK H Sbjct: 122 KVGVVNSSTGDIVVSEVLGKNSTAIKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQH 181 Query: 236 PEKKFKVVGDSKFVRQYFGIAVKKGNKELLDKINAGLKKIVADGTYAKIYKTWFDGDVPT 295 PEK+FK+V D+KF RQYFGIAV KGN ELL KINAGL+KIVADGTYAKIYKTWFD +VPT Sbjct: 182 PEKQFKLVPDAKFERQYFGIAVAKGNSELLGKINAGLQKIVADGTYAKIYKTWFDDNVPT 241 Query: 296 LP 297 LP Sbjct: 242 LP 243