BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0040.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773495.1| nitrate/sulfonate/bicarbonate ABC transporte... 693 0.0 ref|YP_004153369.1| nitrate/sulfonate/bicarbonate ABC transporte... 555 e-156 ref|YP_002551992.1| nitrate/sulfonate/bicarbonate ABC transporte... 530 e-148 ref|NP_891531.1| nitrate/sulfonate/bicarbonate ABC transporter s... 529 e-148 ref|YP_004236556.1| nitrate/sulfonate/bicarbonate ABC transporte... 529 e-148 ref|NP_886535.1| putative periplasmic protein [Bordetella parape... 528 e-148 ref|NP_882350.1| putative periplasmic protein [Bordetella pertus... 526 e-147 ref|YP_001859788.1| nitrate/sulfonate/bicarbonate ABC transporte... 525 e-147 ref|ZP_08405761.1| nitrate/sulfonate/bicarbonate ABC transporter... 521 e-146 ref|YP_841731.1| ABC-type transporter, periplasmic component [Ra... 517 e-144 >ref|YP_003773495.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ61587.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 342 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/342 (99%), Positives = 340/342 (99%) Query: 1 MTLFPSFKERLRRLLTATLALSLLGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQQLIEK 60 MTLFPSFKERLRRLLTATLALSLLGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQQLIEK Sbjct: 1 MTLFPSFKERLRRLLTATLALSLLGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQQLIEK 60 Query: 61 HGKAAGVDIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRGVASL 120 HGKAAGVDIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRG ASL Sbjct: 61 HGKAAGVDIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRGAASL 120 Query: 121 GNFPYYLVSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKIS 180 GNFPYYLVSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKIS Sbjct: 121 GNFPYYLVSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKIS 180 Query: 181 IAVPHPDATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLYA 240 IAVPHPDATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLYA Sbjct: 181 IAVPHPDATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLYA 240 Query: 241 TEKFRKDNPKTYRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEVQ 300 TEKFRKDNPKTYRAFLDALEE ASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEVQ Sbjct: 241 TEKFRKDNPKTYRAFLDALEETASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEVQ 300 Query: 301 FKIAPQNTYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 FKIAPQNTYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS Sbjct: 301 FKIAPQNTYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 >ref|YP_004153369.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Variovorax paradoxus EPS] gb|ADU35258.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Variovorax paradoxus EPS] Length = 336 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 264/331 (79%), Positives = 292/331 (88%) Query: 12 RRLLTATLALSLLGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQQLIEKHGKAAGVDIKV 71 R+ L LL L A AEGQ+RIAEQFG VYLLLNVAQDQ+LIEKH KAAGVD KV Sbjct: 6 RKAAAFVTGLGLLAGSLAAHAEGQIRIAEQFGTVYLLLNVAQDQKLIEKHAKAAGVDAKV 65 Query: 72 EWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRGVASLGNFPYYLVSNN 131 EW+KLSGGSA+NDALLSG+++IAGAGVGPLLT+WDRT G+QNV+GVASLGNFPYYLVSNN Sbjct: 66 EWIKLSGGSAVNDALLSGNIEIAGAGVGPLLTLWDRTKGKQNVKGVASLGNFPYYLVSNN 125 Query: 132 PKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKISIAVPHPDATAA 191 P VKTIADF++KDRIALPAVGVSVQSRVLQ ASAKLWGD ++NRLDKIS+A+PHPDA AA Sbjct: 126 PNVKTIADFTEKDRIALPAVGVSVQSRVLQFASAKLWGDKEFNRLDKISVAIPHPDAAAA 185 Query: 192 IISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLYATEKFRKDNPKT 251 II GGTEITGHFGNPPFQEQELAGNPNAHIVL SY VLGGP+SATVLYATEKFR +NPKT Sbjct: 186 IIKGGTEITGHFGNPPFQEQELAGNPNAHIVLNSYQVLGGPASATVLYATEKFRNENPKT 245 Query: 252 YRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEVQFKIAPQNTYGL 311 Y+AF+DAL+EAA F+ ANP+KAADIYLKV+ DR+LLL+IIKNPEVQFK PQNTY L Sbjct: 246 YKAFVDALDEAAKFVTANPEKAADIYLKVSNAKLDRELLLKIIKNPEVQFKTTPQNTYAL 305 Query: 312 AEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 AEFMHRVGAIKNKPASVKDYFFDD G+ Sbjct: 306 AEFMHRVGAIKNKPASVKDYFFDDAQNASGN 336 >ref|YP_002551992.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Acidovorax ebreus TPSY] gb|ACM31992.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Acidovorax ebreus TPSY] Length = 366 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 256/343 (74%), Positives = 299/343 (87%), Gaps = 3/343 (0%) Query: 3 LFPSFKERLRR--LLTATLALSLLGAPLMARA-EGQLRIAEQFGIVYLLLNVAQDQQLIE 59 F F R R + ++A LLGA +A+A EGQLRIA+QFGIVYLLLNVAQDQ+LIE Sbjct: 24 FFLRFLRRATRRGAVLCSVAGLLLGAHGVAQAAEGQLRIAQQFGIVYLLLNVAQDQKLIE 83 Query: 60 KHGKAAGVDIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRGVAS 119 KHGK AGVDI+VE++KLSGG+ INDALL+GS+DIAGAGVGPL T+WDRT GRQNV+GVAS Sbjct: 84 KHGKVAGVDIRVEFVKLSGGAVINDALLAGSIDIAGAGVGPLFTLWDRTRGRQNVKGVAS 143 Query: 120 LGNFPYYLVSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKI 179 LGNFPYYLVSNNP VKTIADF+DKDRIALPAVGVSVQSR+LQLASA+ WGD +NRLDK+ Sbjct: 144 LGNFPYYLVSNNPAVKTIADFTDKDRIALPAVGVSVQSRILQLASAQRWGDPAFNRLDKL 203 Query: 180 SIAVPHPDATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLY 239 +A+PHPDA AAII GGTEIT HFGNPPFQEQELA NP AHIVLKSYDVLGGP+SATVLY Sbjct: 204 QVALPHPDAAAAIIKGGTEITAHFGNPPFQEQELAANPAAHIVLKSYDVLGGPASATVLY 263 Query: 240 ATEKFRKDNPKTYRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEV 299 ATEKFR D+PKTYRA LDAL+EAA FI A P++AADIYL+ + GNTDR+LLLQ++KNPEV Sbjct: 264 ATEKFRNDSPKTYRALLDALDEAARFIAAQPEQAADIYLRTHGGNTDRQLLLQVLKNPEV 323 Query: 300 QFKIAPQNTYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 QF+I PQNT GL +F+HRVGA+K++P +++DYFFDDP + GG+ Sbjct: 324 QFQIRPQNTLGLGQFLHRVGALKHQPVALQDYFFDDPRIAGGN 366 >ref|NP_891531.1| nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein [Bordetella bronchiseptica RB50] emb|CAE35361.1| putative periplasmic protein [Bordetella bronchiseptica RB50] Length = 347 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 255/347 (73%), Positives = 295/347 (85%), Gaps = 5/347 (1%) Query: 1 MTLFPSFKERLRRLLTATL-----ALSLLGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQ 55 M + ++RL R ++A+L A+ L +P A AEG++RIAEQ+GIVYLLLNVA+DQ Sbjct: 1 MRSHETVRQRLARYVSASLLGAFIAVLALASPTPALAEGRIRIAEQYGIVYLLLNVARDQ 60 Query: 56 QLIEKHGKAAGVDIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVR 115 QLIEKHG+ AGVDI V+W +LSGG+A+NDALLSG++DIAGAGVGPLLTIWDRT GRQNVR Sbjct: 61 QLIEKHGRQAGVDIDVQWTRLSGGAAVNDALLSGAIDIAGAGVGPLLTIWDRTLGRQNVR 120 Query: 116 GVASLGNFPYYLVSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNR 175 GVASLGNFPYYLVSNNP+VKTIADF+DKDRIALPAVGVSVQ+RVLQLASAKLWGD YNR Sbjct: 121 GVASLGNFPYYLVSNNPRVKTIADFTDKDRIALPAVGVSVQARVLQLASAKLWGDEHYNR 180 Query: 176 LDKISIAVPHPDATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSA 235 LD IS+A+PHPDA AAIISGGTEITGHFGNPPFQEQELAGN NA IVLKSYDVLGGP S+ Sbjct: 181 LDAISVALPHPDAAAAIISGGTEITGHFGNPPFQEQELAGNANARIVLKSYDVLGGPGSS 240 Query: 236 TVLYATEKFRKDNPKTYRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIK 295 TVL+ATEKFR++NPKTY AF AL+EAA F A+P++AADIY+++ DR L++II Sbjct: 241 TVLFATEKFRRENPKTYAAFQAALQEAAQFASAHPEQAADIYIRLAGAKIDRDFLIRIIS 300 Query: 296 NPEVQFKIAPQNTYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 NPEVQFK+APQNTY LA FMH+VGAIKNKP S +DYFFDD GS Sbjct: 301 NPEVQFKVAPQNTYALAAFMHKVGAIKNKPQSWRDYFFDDAATAQGS 347 >ref|YP_004236556.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47989.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 353 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 256/320 (80%), Positives = 287/320 (89%), Gaps = 1/320 (0%) Query: 24 LGAPLMARAE-GQLRIAEQFGIVYLLLNVAQDQQLIEKHGKAAGVDIKVEWLKLSGGSAI 82 L AP +A+AE G+LRIA+QFGIVYLLLNVAQDQ+LIEKHGKAAGVDI+VE+L+LSGGSA+ Sbjct: 34 LVAPGIAQAEEGRLRIAQQFGIVYLLLNVAQDQKLIEKHGKAAGVDIQVEFLQLSGGSAV 93 Query: 83 NDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRGVASLGNFPYYLVSNNPKVKTIADFSD 142 NDALLSG +DIAGAGVGPL T+WDRT GRQNV+GVASLGNFPYYLVSNNP VKTIADF+D Sbjct: 94 NDALLSGGIDIAGAGVGPLFTLWDRTRGRQNVKGVASLGNFPYYLVSNNPAVKTIADFTD 153 Query: 143 KDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKISIAVPHPDATAAIISGGTEITGH 202 KDRIALPAVGVSVQSRVLQ ASAKLWGD ++NRLDKI +AVPHPDA AAII GGTEITGH Sbjct: 154 KDRIALPAVGVSVQSRVLQFASAKLWGDKEFNRLDKIQVAVPHPDAAAAIIKGGTEITGH 213 Query: 203 FGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLYATEKFRKDNPKTYRAFLDALEEA 262 FGNPPFQEQELAGNPNA IVL SYDVLGGP+SATVLYATEKFRK++PKTY+AFL L +A Sbjct: 214 FGNPPFQEQELAGNPNARIVLNSYDVLGGPASATVLYATEKFRKESPKTYQAFLAGLHDA 273 Query: 263 ASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEVQFKIAPQNTYGLAEFMHRVGAIK 322 A F+ ANP+KAADIYLKV TDR LLL+II+NPEVQFK+ P+NT GL +F+HRVGAIK Sbjct: 274 AQFVAANPEKAADIYLKVTGAKTDRALLLKIIRNPEVQFKVQPENTLGLGQFLHRVGAIK 333 Query: 323 NKPASVKDYFFDDPHVQGGS 342 NKP ++KDYFFDD GS Sbjct: 334 NKPEALKDYFFDDALTARGS 353 >ref|NP_886535.1| putative periplasmic protein [Bordetella parapertussis 12822] emb|CAE39688.1| putative periplasmic protein [Bordetella parapertussis] Length = 347 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 255/347 (73%), Positives = 295/347 (85%), Gaps = 5/347 (1%) Query: 1 MTLFPSFKERLRRLLTATL-----ALSLLGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQ 55 M + ++RL R ++A+L A+ L +P A AEG++RIAEQ+GIVYLLLNVA+DQ Sbjct: 1 MRSHETVRQRLARYVSASLLGAFIAVLALASPTPALAEGRIRIAEQYGIVYLLLNVARDQ 60 Query: 56 QLIEKHGKAAGVDIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVR 115 QLIEKHG+ AGVDI V+W +LSGG+A+NDALLSG++DIAGAGVGPLLTIWDRT GRQNVR Sbjct: 61 QLIEKHGRQAGVDIDVQWTRLSGGAAVNDALLSGAIDIAGAGVGPLLTIWDRTLGRQNVR 120 Query: 116 GVASLGNFPYYLVSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNR 175 GVASLGNFPYYLVSNNP+VKTIADF+DKDRIALPAVGVSVQ+RVLQLASAKLWGD YNR Sbjct: 121 GVASLGNFPYYLVSNNPRVKTIADFTDKDRIALPAVGVSVQARVLQLASAKLWGDEHYNR 180 Query: 176 LDKISIAVPHPDATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSA 235 LD IS+A+PHPDA AAIISGGTEITGHFGNPPFQEQELAGN NA IVLKSYDVLGGP S+ Sbjct: 181 LDAISVALPHPDAAAAIISGGTEITGHFGNPPFQEQELAGNANARIVLKSYDVLGGPGSS 240 Query: 236 TVLYATEKFRKDNPKTYRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIK 295 TVL+ATEKFR++NPKTY AF AL+EAA F A+P++AADIY+++ DR L++II Sbjct: 241 TVLFATEKFRRENPKTYAAFQAALQEAAQFASAHPEQAADIYIRLAGAKIDRDFLIRIIS 300 Query: 296 NPEVQFKIAPQNTYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 NPEVQFK+APQNTY LA FMH+VGAIKNKP S +DYFFDD GS Sbjct: 301 NPEVQFKVAPQNTYALAVFMHKVGAIKNKPQSWRDYFFDDAATAQGS 347 >ref|NP_882350.1| putative periplasmic protein [Bordetella pertussis Tohama I] emb|CAE44110.1| putative periplasmic protein [Bordetella pertussis Tohama I] gb|AEE68964.1| putative periplasmic protein [Bordetella pertussis CS] Length = 347 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 254/347 (73%), Positives = 294/347 (84%), Gaps = 5/347 (1%) Query: 1 MTLFPSFKERLRRLLTATL-----ALSLLGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQ 55 M + ++RL R ++A+L A+ L +P A AEG++RIAEQ+GIVYLLLNVA+DQ Sbjct: 1 MRSHETVRQRLARYVSASLLGAFIAVLALASPTPALAEGRIRIAEQYGIVYLLLNVARDQ 60 Query: 56 QLIEKHGKAAGVDIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVR 115 QLIEKHG+ AGVDI V+W +LSGG+A+NDALLSG++DIAGAGVGPLLTIWDRT GRQNVR Sbjct: 61 QLIEKHGRQAGVDIDVQWTRLSGGAAVNDALLSGAIDIAGAGVGPLLTIWDRTLGRQNVR 120 Query: 116 GVASLGNFPYYLVSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNR 175 GVASLGNFPYYLVSNNP+VKTIADF+DKDRIALPAVGVSVQ+RVLQLASAKLW D YNR Sbjct: 121 GVASLGNFPYYLVSNNPRVKTIADFTDKDRIALPAVGVSVQARVLQLASAKLWDDEHYNR 180 Query: 176 LDKISIAVPHPDATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSA 235 LD IS+A+PHPDA AAIISGGTEITGHFGNPPFQEQELAGN NA IVLKSYDVLGGP S+ Sbjct: 181 LDAISVALPHPDAAAAIISGGTEITGHFGNPPFQEQELAGNANARIVLKSYDVLGGPGSS 240 Query: 236 TVLYATEKFRKDNPKTYRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIK 295 TVL+ATEKFR++NPKTY AF AL+EAA F A+P++AADIY+++ DR L++II Sbjct: 241 TVLFATEKFRRENPKTYAAFQVALQEAAQFASAHPEQAADIYIRLAGAKIDRDFLIRIIS 300 Query: 296 NPEVQFKIAPQNTYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 NPEVQFK+APQNTY LA FMH+VGAIKNKP S +DYFFDD GS Sbjct: 301 NPEVQFKVAPQNTYALAAFMHKVGAIKNKPQSWRDYFFDDAATAQGS 347 >ref|YP_001859788.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Burkholderia phymatum STM815] gb|ACC72742.1| ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [Burkholderia phymatum STM815] Length = 350 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 258/335 (77%), Positives = 293/335 (87%), Gaps = 4/335 (1%) Query: 12 RRLLTATLALSL----LGAPLMARAEGQLRIAEQFGIVYLLLNVAQDQQLIEKHGKAAGV 67 RR +++ LALSL LGA L A AEG +R+AEQFGIVYLLLNVA+DQQ IEK G+ G+ Sbjct: 16 RRFVSSLLALSLGAAGLGASLDAHAEGHIRVAEQFGIVYLLLNVARDQQFIEKEGRKEGL 75 Query: 68 DIKVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRGVASLGNFPYYL 127 DIKV+W+KLSGGSA+NDALLSGS+D+AGAGVGPLLTIWDRT+GRQNV+GVASLGN PYYL Sbjct: 76 DIKVDWVKLSGGSAVNDALLSGSIDVAGAGVGPLLTIWDRTHGRQNVKGVASLGNLPYYL 135 Query: 128 VSNNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKISIAVPHPD 187 VSNNP VKTIADF+DKDRIALPAV VSVQSRVLQ ASAK WGD +YNRLDKI+ AVPHPD Sbjct: 136 VSNNPNVKTIADFTDKDRIALPAVSVSVQSRVLQFASAKRWGDKEYNRLDKITQAVPHPD 195 Query: 188 ATAAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLYATEKFRKD 247 A AAII+GGTEIT HFGNPPFQEQELA NPNAHIVL SYDVLGGPSSATVLYATEKFR + Sbjct: 196 AAAAIIAGGTEITAHFGNPPFQEQELAANPNAHIVLNSYDVLGGPSSATVLYATEKFRNE 255 Query: 248 NPKTYRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEVQFKIAPQN 307 NPKTYRAF++ L +AA FI ANPD AADIY++VN+ TDR LLL +I+NP+VQFK+APQN Sbjct: 256 NPKTYRAFVNGLSDAAQFITANPDAAADIYIRVNQAKTDRDLLLSVIRNPQVQFKVAPQN 315 Query: 308 TYGLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 T GLA+FM+RVGAI+N+P S KDYFF+DP GS Sbjct: 316 TLGLAQFMYRVGAIRNEPKSWKDYFFEDPATASGS 350 >ref|ZP_08405761.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Hylemonella gracilis ATCC 19624] gb|EGI77200.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein [Hylemonella gracilis ATCC 19624] Length = 331 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 252/333 (75%), Positives = 292/333 (87%), Gaps = 5/333 (1%) Query: 11 LRRLLTATLALSLLGAPLMARAE-GQLRIAEQFGIVYLLLNVAQDQQLIEKHGKAAGVDI 69 R L A AL+LL ARAE G+LRIA+QFG+VYLLLNVAQDQQLIEKHGK GVDI Sbjct: 3 FRFLTLAVTALALLTG--TARAEEGRLRIAQQFGVVYLLLNVAQDQQLIEKHGKQQGVDI 60 Query: 70 KVEWLKLSGGSAINDALLSGSVDIAGAGVGPLLTIWDRTYGRQNVRGVASLGNFPYYLVS 129 KVE+++LSGGSA+NDALL+GS+DIAGAGVGPL TIWDRT G+QNV+GVASLGNFPYYLVS Sbjct: 61 KVEFVQLSGGSAVNDALLAGSIDIAGAGVGPLFTIWDRTRGKQNVKGVASLGNFPYYLVS 120 Query: 130 NNPKVKTIADFSDKDRIALPAVGVSVQSRVLQLASAKLWGDAQYNRLDKISIAVPHPDAT 189 NNP VKTIADF+DKDRIALP+VGVSVQSRVLQ ASAKLWGD ++NRLDK+ +A+PHP+A Sbjct: 121 NNPAVKTIADFTDKDRIALPSVGVSVQSRVLQFASAKLWGDKEFNRLDKLQVALPHPEAA 180 Query: 190 AAIISGGTEITGHFGNPPFQEQELAGNPNAHIVLKSYDVLGGPSSATVLYATEKFRKDNP 249 AAIISGGTEIT HFGNPPFQEQELAGNP A IVL SYDVLGGP+SAT+LYATEKFR ++P Sbjct: 181 AAIISGGTEITAHFGNPPFQEQELAGNPKARIVLNSYDVLGGPASATLLYATEKFRAESP 240 Query: 250 KTYRAFLDALEEAASFIRANPDKAADIYLKVNKGNTDRKLLLQIIKNPEVQFKIAPQNTY 309 KTYRAF++AL+EAA FI NP++AADIYLK NK DR LLL+I++NPEVQFK PQNT Sbjct: 241 KTYRAFVNALDEAAQFIARNPEQAADIYLKTNK--VDRALLLKIVRNPEVQFKTTPQNTL 298 Query: 310 GLAEFMHRVGAIKNKPASVKDYFFDDPHVQGGS 342 GL +F++RVGAIKN+P ++ DYFFDD HV+GG+ Sbjct: 299 GLGQFLYRVGAIKNEPKTITDYFFDDAHVKGGN 331 >ref|YP_841731.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] emb|CAJ97001.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] Length = 336 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 250/313 (79%), Positives = 285/313 (91%) Query: 30 ARAEGQLRIAEQFGIVYLLLNVAQDQQLIEKHGKAAGVDIKVEWLKLSGGSAINDALLSG 89 A AEG+LRIAEQFG+VYLLLNVA+DQQLIEKHGK GVDIKVEW +LSGG+A+NDALLSG Sbjct: 24 AHAEGKLRIAEQFGVVYLLLNVARDQQLIEKHGKQQGVDIKVEWTQLSGGAAVNDALLSG 83 Query: 90 SVDIAGAGVGPLLTIWDRTYGRQNVRGVASLGNFPYYLVSNNPKVKTIADFSDKDRIALP 149 ++DIAGAGVGPLLT+WDRT+G+QNVRGVASLGNFPYYLVSNNPKVK+IADF++KDRIALP Sbjct: 84 AIDIAGAGVGPLLTLWDRTHGKQNVRGVASLGNFPYYLVSNNPKVKSIADFTEKDRIALP 143 Query: 150 AVGVSVQSRVLQLASAKLWGDAQYNRLDKISIAVPHPDATAAIISGGTEITGHFGNPPFQ 209 AVGVSVQSRVLQLA+A+ WGD +YNRLDK ++AVPHPDA AAIISGGTEITGHFGNPPFQ Sbjct: 144 AVGVSVQSRVLQLAAARQWGDKEYNRLDKWTVAVPHPDAAAAIISGGTEITGHFGNPPFQ 203 Query: 210 EQELAGNPNAHIVLKSYDVLGGPSSATVLYATEKFRKDNPKTYRAFLDALEEAASFIRAN 269 EQELAGNPNA IVL SYDVLGGPSS+TVLYATEKFR DNPKTYRAF+DAL EAA+F AN Sbjct: 204 EQELAGNPNARIVLNSYDVLGGPSSSTVLYATEKFRSDNPKTYRAFVDALAEAAAFATAN 263 Query: 270 PDKAADIYLKVNKGNTDRKLLLQIIKNPEVQFKIAPQNTYGLAEFMHRVGAIKNKPASVK 329 P+ AADIYL+ +K TDR LLL+++KNP+VQF++APQNT+ LA FMHRVGAI+N+P S + Sbjct: 264 PEAAADIYLRQSKAKTDRALLLRVLKNPQVQFRVAPQNTFALAAFMHRVGAIRNQPKSWQ 323 Query: 330 DYFFDDPHVQGGS 342 DYFF DP GS Sbjct: 324 DYFFQDPVTAQGS 336