BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0022.p (301 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773478.1| LysR family transcription regulator protein ... 613 e-173 gb|EFV87680.1| LysR-family transcriptional activator [Achromobac... 300 2e-79 ref|YP_003980862.1| LysR family transcriptional regulator [Achro... 300 3e-79 gb|EGP48011.1| LysR family regulatory helix-turn-helix protein 1... 299 4e-79 ref|ZP_06689256.1| LysR family transcriptional regulator [Achrom... 298 5e-79 ref|NP_880700.1| LysR family transcriptional activator [Bordetel... 298 6e-79 ref|NP_884646.1| LysR family transcriptional activator [Bordetel... 293 2e-77 ref|YP_004681443.1| LysR family transcriptional regulator [Cupri... 293 3e-77 ref|YP_002007839.1| regulatory protein, hth LysR, substrate-bind... 292 4e-77 ref|YP_840796.1| LysR family transcriptional regulator [Ralstoni... 291 1e-76 >ref|YP_003773478.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ61570.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 301 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 300/301 (99%), Positives = 300/301 (99%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT Sbjct: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA Sbjct: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS Sbjct: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL Sbjct: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 Query: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYVTRGGYLSHAAHAWMAVSAQLFAGGKLRKST 300 PEPFIHRLATQQLQAVRLVEPEVQWKVAYVTRGGYLSHAAHAWMAVSAQLFAGGKLRKS Sbjct: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYVTRGGYLSHAAHAWMAVSAQLFAGGKLRKSA 300 Query: 301 S 301 S Sbjct: 301 S 301 >gb|EFV87680.1| LysR-family transcriptional activator [Achromobacter xylosoxidans C54] Length = 301 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 149/296 (50%), Positives = 205/296 (69%), Gaps = 1/296 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 MD+RALRYF ETVRH+SF++AA AL VTQSTVSKM+RQLE+E PLL+RDG + TDT Sbjct: 1 MDVRALRYFVETVRHASFTQAAKALFVTQSTVSKMIRQLEDETGTPLLVRDGHTARPTDT 60 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRV+Y++G Q+L M++L E+R T L+ G LE+GIPPMIN+L TPV+K FRE HP I Sbjct: 61 GRVMYQRGLQVLETMRQLTEEMRQTAELQRGSLEVGIPPMINLLFTPVVKRFRELHPGIH 120 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L+E TG +E+ VA+GELE+G T+LP P+ GL S+P+W + + + S Sbjct: 121 LTLREGTGRAVEELVASGELEVGATILPIVPDSGLAARAFGSHPIWVIGPPDAAWAGKTS 180 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 L + L L++ ++F +TR LR F + G++P I AQSA WD+LVAMA AG+G ALL Sbjct: 181 LPLSALRDTRLLIPTDDFAMTRRLRQAFADAGLQPGIAAQSAHWDFLVAMASAGLGAALL 240 Query: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGK 295 PEP + R+ T+ L RL + +QW+V ++ + GYLS+AA AW+ V ++ GK Sbjct: 241 PEPLMRRMKTRGLSTARLAKSGLQWEVGHIWQQSGYLSYAARAWLQVCDEVLGAGK 296 >ref|YP_003980862.1| LysR family transcriptional regulator [Achromobacter xylosoxidans A8] gb|ADP18147.1| bacterial regulatory helix-turn-helix protein, LysR family protein 160 [Achromobacter xylosoxidans A8] Length = 306 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 153/300 (51%), Positives = 203/300 (67%), Gaps = 3/300 (1%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 MD+RALRYF ETVRH+SF++AA L VTQSTVSKM+RQLEEE PLLIRDG + TDT Sbjct: 1 MDVRALRYFVETVRHASFTQAAKTLFVTQSTVSKMIRQLEEEAGTPLLIRDGHTARPTDT 60 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRV+Y++G Q+L M++L E+R T LR G LE+GIPPMIN+L TPV+K FRE HP I Sbjct: 61 GRVMYQRGLQVLETMRQLSEELRQTADLRRGALEVGIPPMINLLFTPVVKRFRELHPGIH 120 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L+E TG +E VA+GELE+G T+LP P+ GL P SYP+W + + + S Sbjct: 121 LTLREGTGQAVEGLVASGELEVGATILPIAPDSGLAAQPFGSYPIWVIGPPDAPWAGKTS 180 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 A L L++ ++F +TR LR F + G +P I AQSA WD+LVAMA AG+G ALL Sbjct: 181 FPLAALRDARLLIPTDDFAMTRRLRQAFADAGFQPGIAAQSAHWDFLVAMASAGLGVALL 240 Query: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGKLRKS 299 PEP + R+ T+ L +L + +QW+V ++ + GYLS+AA AW+ V + GK +K Sbjct: 241 PEPLMLRMKTRGLSTAKLAKSGMQWEVGHIWQQSGYLSYAARAWLEVCDTVL--GKPKKG 298 >gb|EGP48011.1| LysR family regulatory helix-turn-helix protein 160 [Achromobacter xylosoxidans AXX-A] Length = 307 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 149/294 (50%), Positives = 201/294 (68%), Gaps = 1/294 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 MD+RALRYF ETVRH+SF++AA AL VTQSTVSKM+RQLEEE PLL+RDG + TDT Sbjct: 1 MDVRALRYFVETVRHASFTQAAKALFVTQSTVSKMIRQLEEEAGTPLLVRDGHTARPTDT 60 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRV+Y++G Q+L M++L E+R T L+ G LE+GIPPMIN+L TPV+K FRE HP I Sbjct: 61 GRVMYQRGLQVLETMRQLGEEMRQTAELQRGSLEVGIPPMINLLFTPVVKRFRELHPGIH 120 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L+E TG +E VA GELE+G T+LP P+ GL SYP+W + + + S Sbjct: 121 LTLREGTGRAVEDLVAGGELEVGATILPIAPDSGLAAQAFGSYPIWVIGPPDAAWAGKTS 180 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 L + L L++ ++F +TR LR F + G++P I AQSA WD+LVAMA AG+G ALL Sbjct: 181 LPLSALRDTRLLIPTDDFAMTRRLRQAFADAGLQPGIAAQSAHWDFLVAMASAGLGVALL 240 Query: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAG 293 PEP + R+ T+ L +L + +QW+V ++ + GYLS+AA AW+ V + G Sbjct: 241 PEPLMQRMKTRGLSTAKLAKSGLQWEVGHIWQQSGYLSYAARAWLEVCDAVLGG 294 >ref|ZP_06689256.1| LysR family transcriptional regulator [Achromobacter piechaudii ATCC 43553] gb|EFF73775.1| LysR family transcriptional regulator [Achromobacter piechaudii ATCC 43553] Length = 308 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 153/302 (50%), Positives = 204/302 (67%), Gaps = 3/302 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 MD+RALRYF ETVRH+SF++AA L VTQSTVSKM+RQLEEE PLLIRDG + TDT Sbjct: 1 MDVRALRYFVETVRHASFTQAAKTLFVTQSTVSKMIRQLEEEAGTPLLIRDGHTARPTDT 60 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRV+Y++G Q+L M++L+ E+R T LR G LE+GIPPMIN+L TPV+K FRE HP I Sbjct: 61 GRVMYQRGLQVLDTMRQLNDEMRQTADLRRGALEVGIPPMINLLFTPVVKRFRELHPGIH 120 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L+E TG +E VA+GELE+G T+LP P+ GL P SYP+W + + + S Sbjct: 121 LTLREGTGQAVEGLVASGELEVGATILPIAPDGGLAAQPFGSYPIWVIGPPDAPWAGKTS 180 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 L L L++ ++F +TR LR F + G +P I AQSA WD+LVAMA AG+G ALL Sbjct: 181 LPLNALRDARLLIPTDDFAITRRLRQAFADAGFQPSIAAQSAHWDFLVAMASAGLGVALL 240 Query: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGKLRKS 299 PEP + R+ T+ L +L + +QW+V ++ + GYLS AA AW+ V + GK +K Sbjct: 241 PEPLMQRMKTRGLSTAKLAKSGMQWEVGHIWLQSGYLSFAARAWLDVCDAVL--GKPKKP 298 Query: 300 TS 301 + Sbjct: 299 VA 300 >ref|NP_880700.1| LysR family transcriptional activator [Bordetella pertussis Tohama I] ref|NP_888405.1| LysR family transcriptional regulator [Bordetella bronchiseptica RB50] emb|CAE42311.1| putative LysR-family transcriptional activator [Bordetella pertussis Tohama I] emb|CAE32357.1| putative LysR-family transcriptional activator [Bordetella bronchiseptica RB50] gb|AEE67316.1| LysR family transcriptional activator [Bordetella pertussis CS] Length = 303 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 154/302 (50%), Positives = 202/302 (66%), Gaps = 1/302 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 MD+RALRYF ETVR +SF++AA AL VTQSTVSKM+RQLE+EV PLLIRDG + TDT Sbjct: 1 MDVRALRYFVETVRTASFTQAARALFVTQSTVSKMIRQLEDEVGTPLLIRDGHTARPTDT 60 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GR+VYE+G IL AM++L AEVR+ L+ G LE+GIPPMIN+L TPV+K FRERHP I Sbjct: 61 GRIVYERGLHILGAMRQLDAEVREAVDLQRGELEVGIPPMINLLFTPVVKRFRERHPHIR 120 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L+EDTG +E+ VA GELE+G TVLP L+ SY +W + + + + Sbjct: 121 LSLREDTGQAVERLVAAGELEVGATVLPIQDPGPLQATRFGSYALWVIGPPAAAWAGKTA 180 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 L L +PL+L ++F LTR LR + G P I AQSA WD+L AMA A +G ALL Sbjct: 181 LPLTALRDLPLLLPTDDFALTRRLRQACAQAGFAPRIAAQSAHWDFLAAMASADLGVALL 240 Query: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGKLRKS 299 PEP + RL T+ L RL + +QW++ ++ R YLSHAA AW+ V+ ++ G+ + Sbjct: 241 PEPLVQRLKTRGLSTARLAKAGLQWEIGHIRVRDRYLSHAARAWLEVATEVLGNGQPARK 300 Query: 300 TS 301 S Sbjct: 301 PS 302 >ref|NP_884646.1| LysR family transcriptional activator [Bordetella parapertussis 12822] emb|CAE37707.1| putative LysR-family transcriptional activator [Bordetella parapertussis] Length = 303 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 152/302 (50%), Positives = 200/302 (66%), Gaps = 1/302 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 MD+RALRYF ETVR +SF++AA AL VTQSTVSKM+ QLE+EV PLLIRDG + TDT Sbjct: 1 MDVRALRYFVETVRTASFTQAARALFVTQSTVSKMICQLEDEVGTPLLIRDGHTARPTDT 60 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GR+VYE+G IL AM++L AEVR+ L+ G LE+GIPPMIN+L TPV+K FRERHP I Sbjct: 61 GRIVYERGLHILGAMRQLDAEVREAVDLQRGELEVGIPPMINLLFTPVVKRFRERHPHIR 120 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L+EDTG +E+ VA GELE+G TVLP L+ SY +W + + + + Sbjct: 121 LSLREDTGQAVERLVAAGELEVGATVLPIQDPGPLQATRFGSYALWVIGPPAAAWAGKTA 180 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 L L +PL+L ++F LTR LR + G P I AQSA WD+L AMA A +G ALL Sbjct: 181 LPLTALRDLPLLLPTDDFALTRRLRQACAQAGFAPRIAAQSAHWDFLAAMASADLGVALL 240 Query: 241 PEPFIHRLATQQLQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGKLRKS 299 PEP + RL T+ L RL + +QW++ ++ R YLSH A AW+ V+ ++ G+ + Sbjct: 241 PEPLVQRLKTRGLSTARLAKAGLQWEIGHIRVRDRYLSHTARAWLEVATEVLGNGQPARK 300 Query: 300 TS 301 S Sbjct: 301 PS 302 >ref|YP_004681443.1| LysR family transcriptional regulator [Cupriavidus necator N-1] gb|AEI80211.1| transcriptional regulator LysR family [Cupriavidus necator N-1] Length = 318 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 149/297 (50%), Positives = 200/297 (67%), Gaps = 2/297 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 +DIRALRYF ET R SF++AA +L VTQST+SKMV+QLE+EV PLLIR+G+ ++LTD Sbjct: 20 IDIRALRYFVETARLRSFTQAATSLFVTQSTISKMVKQLEDEVGQPLLIREGKSVRLTDV 79 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRVVYE+GQ+ L + RL EV D +L G+L +GIPPM+N+ +P + AFR+R+P++ Sbjct: 80 GRVVYERGQEALGVVHRLTLEVSDLSSLGRGQLTVGIPPMVNLFFSPAVSAFRQRYPNLL 139 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L E G +EQ VA+GELE+G TVLP D L LET YP+WAV + + Sbjct: 140 LTLDEHGGQVVEQLVASGELEVGATVLPGDSGLALETRQFGRYPIWAVGPRKAAWARGRT 199 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 + A L PLV+L ++F LTR LR F E I+P +VA+S WD+L +MA AG+GT L Sbjct: 200 VTLAALRDEPLVMLTDDFSLTRKLRQAFLEARIEPRVVARSGHWDFLASMAAAGLGTTFL 259 Query: 241 PEPFIHRLATQ-QLQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGK 295 P+P RL Q L RL EP + W +A++ + G YLSHAA AW+AV ++ GGK Sbjct: 260 PQPLAERLQGQGTLAMARLTEPAMDWTMAHIWSPGRYLSHAARAWLAVCDEVLGGGK 316 >ref|YP_002007839.1| regulatory protein, hth LysR, substrate-binding [Cupriavidus taiwanensis LMG 19424] emb|CAQ71782.1| putative regulatory protein, HTH LysR, substrate-binding [Cupriavidus taiwanensis LMG 19424] Length = 301 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 148/297 (49%), Positives = 199/297 (67%), Gaps = 2/297 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 +DIRALRYF ET R SF++AA +L VTQST+SKMVRQLE+E+ PLLIR+G+ ++LTD Sbjct: 3 IDIRALRYFVETARLRSFTQAASSLFVTQSTISKMVRQLEDEIGQPLLIREGKSVRLTDV 62 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRVVYE+GQ+ L + RL EV D +L G+L +GIPPM+N+ +P + AFR+R+P+++ Sbjct: 63 GRVVYERGQEALGVVHRLTLEVSDLSSLGRGQLTVGIPPMVNLFFSPAVSAFRQRYPNLS 122 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L E G +EQ VA+GELE+G TVLP D L LET YP+WAV + + Sbjct: 123 LTLDEHGGQVVEQLVASGELEVGATVLPGDSGLSLETRQFGRYPIWAVGPRKAAWARGRT 182 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 + A L PLV+L +F LTR LR F E I+P +VA+S WD+L +MA AG+GT L Sbjct: 183 VSLAALRDEPLVMLTEDFSLTRKLRQAFLEARIEPRVVARSGHWDFLASMAAAGLGTTFL 242 Query: 241 PEPFIHRLATQQ-LQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGK 295 P+P RL Q L RL EP V W +A++ + G YLSHAA AW+AV ++ G+ Sbjct: 243 PQPLAERLQAQDTLAMARLTEPAVDWTMAHIWSPGRYLSHAARAWLAVCEEVLGTGR 299 >ref|YP_840796.1| LysR family transcriptional regulator [Ralstonia eutropha H16] emb|CAJ96066.1| transcriptional regulator, LysR-family [Ralstonia eutropha H16] Length = 301 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 148/297 (49%), Positives = 200/297 (67%), Gaps = 2/297 (0%) Query: 1 MDIRALRYFTETVRHSSFSRAADALHVTQSTVSKMVRQLEEEVDAPLLIRDGRRLQLTDT 60 +DIRALRYF ET R SF++AA +L VTQST+SKMV+QLE+EV PLLIR+G+ ++LTD Sbjct: 3 IDIRALRYFVETARLRSFTQAAASLFVTQSTISKMVKQLEDEVGQPLLIREGKSVRLTDV 62 Query: 61 GRVVYEQGQQILAAMQRLHAEVRDTKALRSGRLEIGIPPMINILCTPVLKAFRERHPDIA 120 GRVVYE+GQ+ L + RL EV D +L G+L +GIPPM+N+ +P + AFR+R+P+++ Sbjct: 63 GRVVYERGQEALGVVHRLTLEVSDLSSLGRGQLTVGIPPMVNLFFSPAVSAFRQRYPNLS 122 Query: 121 VVLQEDTGPQIEQRVANGELEIGMTVLPADPELGLETLPVASYPMWAVAQAGSFQKNRAS 180 + L E G +EQ VA+GELE+G TVLP D L LET YP+WAV + + Sbjct: 123 LTLDEHGGQVVEQLVASGELEVGATVLPGDSGLALETRQFGRYPIWAVGPRKAAWARGRT 182 Query: 181 LRCAQLDGMPLVLLNNEFGLTRSLRGVFREHGIKPEIVAQSAQWDWLVAMALAGMGTALL 240 + A L PLV+L ++F LTR LR F E I+P +VA+S WD+L +MA AG+GT L Sbjct: 183 VTLAALRDEPLVMLTDDFSLTRMLRQAFLEARIEPRVVARSGHWDFLASMAAAGLGTTFL 242 Query: 241 PEPFIHRLATQQ-LQAVRLVEPEVQWKVAYV-TRGGYLSHAAHAWMAVSAQLFAGGK 295 P+P RL Q L RL P + W +A++ + G YLSHAA AW+AV ++ GGK Sbjct: 243 PQPLAERLQGQDTLAMARLTAPAMDWTMAHIWSPGRYLSHAARAWLAVCEEVLGGGK 299