BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0012.p (534 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773468.1| methyl-accepting chemotaxis protein I [Herba... 1050 0.0 ref|YP_001355274.1| methyl-accepting chemotaxis protein [Janthin... 485 e-135 ref|YP_001355234.1| methyl-accepting chemotaxis protein [Janthin... 482 e-134 ref|YP_001352200.1| methyl-accepting chemotaxis protein [Janthin... 481 e-133 ref|YP_003776822.1| methyl-accepting chemotaxis protein [Herbasp... 453 e-125 ref|YP_003777912.1| methyl-accepting chemotaxis transducer trans... 448 e-123 gb|AAK83219.1|AF338038_2 putative methyl-accepting chemotaxis pr... 445 e-122 ref|YP_001101318.1| methyl-accepting chemotaxis protein [Hermini... 442 e-122 ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer ... 441 e-121 ref|YP_004215574.1| methyl-accepting chemotaxis sensory transduc... 441 e-121 >ref|YP_003773468.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] gb|ADJ61560.1| methyl-accepting chemotaxis protein I protein [Herbaspirillum seropedicae SmR1] Length = 534 Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 532/534 (99%), Positives = 533/534 (99%) Query: 1 MQLSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVD 60 MQLSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVD Sbjct: 1 MQLSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVD 60 Query: 61 QLNLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAALTTLVT 120 QLNLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAALTTLVT Sbjct: 61 QLNLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAALTTLVT 120 Query: 121 AQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDE 180 AQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDE Sbjct: 121 AQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDE 180 Query: 181 VESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAH 240 VESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAH Sbjct: 181 VESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAH 240 Query: 241 GRDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASLEE 300 GRDETSMLLRALKKMNDRLLDIVSQVR+STDTIATASSEIARGNLDLSSRTEEQAASLEE Sbjct: 241 GRDETSMLLRALKKMNDRLLDIVSQVRVSTDTIATASSEIARGNLDLSSRTEEQAASLEE 300 Query: 301 TASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDI 360 TASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDI Sbjct: 301 TASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDI 360 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADS 420 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADS Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADS 420 Query: 421 VARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVT 480 VARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVT Sbjct: 421 VARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVT 480 Query: 481 QQNAALVEQAAAAAQALQDQAAQLARMVSIFKLEDAAPEPRRVAAPASPRLSYA 534 QQNAALVEQAAAAAQALQDQAAQLARMVSIFKLEDAA EPRRVAAPASPRLSYA Sbjct: 481 QQNAALVEQAAAAAQALQDQAAQLARMVSIFKLEDAASEPRRVAAPASPRLSYA 534 >ref|YP_001355274.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89882.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 571 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 280/537 (52%), Positives = 383/537 (71%), Gaps = 10/537 (1%) Query: 3 LSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVDQL 62 + N+ I RL L FG +++L++ +A R+G LN + +V D+YPKTV+A + D L Sbjct: 1 MKNLKIGQRLSLSFGSMVILLVVLATLAFTRIGGLNDAISEVDGDRYPKTVLANVMKDDL 60 Query: 63 NLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAALTTLVTAQ 122 N IAR++RN LL+ + I++E +I A ++ L +L+K + R + L + Sbjct: 61 NQIARNMRNALLMTEKAAIQAELTQIGKATDSLNNALVELEKTVRSERGRQTIAGLQADR 120 Query: 123 NAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDEVE 182 + + +D + + G K+ A+ +L EVRP Q + + + D LI Q+E+MK +G E Sbjct: 121 SKFLPLKDDFIKLASAGIKDEAVALLFAEVRPAQLSYLASIDKLIDYQNELMKKSGAEAN 180 Query: 183 SNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAHGR 242 + +Q + L+ + + + AAV A + TRSIT PL +AV +A VA GDLT +I + Sbjct: 181 AKASQTQLLIGIFSIIAVLIAAVFAVLATRSITRPLSQAVVLARKVADGDLTGSIVVESK 240 Query: 243 DETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASLEETA 302 DET LL+ALK MN+ LL IV+QVR+ TDTIA+AS +IA GNLDLSSRTE+QA+SLEETA Sbjct: 241 DETGQLLQALKDMNEGLLKIVTQVRLGTDTIASASHQIATGNLDLSSRTEQQASSLEETA 300 Query: 303 SSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDIIG 362 SSME+LT+TVKQNA +A Q++QLA SAS++A +GG VV VV+TMG I+ S+KKIVDIIG Sbjct: 301 SSMEELTSTVKQNAENARQSNQLALSASEVAVRGGAVVSKVVDTMGEINDSAKKIVDIIG 360 Query: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADSVA 422 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA+AA EIK LI DSV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKELIGDSVD 420 Query: 423 RVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVTQQ 482 +V GS+LV+ AG TM EVV+SV+RV ++++EI++A QEQ+ GIEQ+N A++QMDQVTQQ Sbjct: 421 KVSIGSRLVDDAGATMREVVESVKRVTDIMSEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 483 NAALVEQAAAAAQALQDQAAQLARMVSIFKLE-------DAAPEPRRVAAPASPRLS 532 NAALVE+AAAAA++LQ QA+ L+++V +FKL+ +A P AP P+++ Sbjct: 481 NAALVEEAAAAAESLQGQASHLSQVVGVFKLDGHGTTVVNAVP---TYTAPEQPKVA 534 >ref|YP_001355234.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89943.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 566 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 290/533 (54%), Positives = 378/533 (70%), Gaps = 3/533 (0%) Query: 3 LSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVDQL 62 + N+ I RL L FG ++ +++ +A RL +L+A + V +D+YPKTV A I D L Sbjct: 1 MKNLKIGQRLALSFGSVVAVLIVLAVIAFTRLDKLDAAIGMVSNDRYPKTVNAHIIKDTL 60 Query: 63 NLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAALTTLVTAQ 122 N AR++RN LL+ QIK E + I I E L +LD+ + R + L A+ Sbjct: 61 NETARNMRNALLMTDAAQIKGELDTIEKGSVTIAEALDKLDRTIKSEKGRTYIKALTDAR 120 Query: 123 NAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDEVE 182 + +DK +A+V QG + A +L EVRP Q M D L+ Q +M AG++ Sbjct: 121 GRFTPVKDKFVALVAQGMRAEAQILLFAEVRPAQLEYMLGLDRLVEFQSNLMHKAGEDAH 180 Query: 183 SNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAHGR 242 A A+ L+ +L+ + +A + ++ TRSIT PL +AV +A VA GDLT I + Sbjct: 181 EVSANAQQLVGILSVIAVIISAFLGFLATRSITRPLSQAVGLARKVADGDLTGTIVVTSK 240 Query: 243 DETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASLEETA 302 DET LL+AL+ MN+ L+ IV+QVR+ TDTIATASS+IA GNLDLSSRTEEQA+SLEETA Sbjct: 241 DETGQLLQALQDMNNGLVRIVTQVRMGTDTIATASSQIATGNLDLSSRTEEQASSLEETA 300 Query: 303 SSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDIIG 362 SSME+LT+TVKQNA +A Q++QLA +AS++A +GG VV VVETMG+I+ S+ KIVDIIG Sbjct: 301 SSMEELTSTVKQNADNARQSNQLALTASEVAVRGGAVVSQVVETMGSINDSANKIVDIIG 360 Query: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADSVA 422 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA+AA EIK LI DSV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKEIKTLIDDSVE 420 Query: 423 RVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVTQQ 482 +V NGS+LV AG TM EVV+SV+RV +++ EI++A QEQ+ GIEQ+N A++QMDQVTQQ Sbjct: 421 KVNNGSRLVHDAGTTMAEVVESVRRVTDIMGEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 483 NAALVEQAAAAAQALQDQAAQLARMVSIFKLEDAA---PEPRRVAAPASPRLS 532 NAALVE+AAAAA++LQDQA L+++VS+FKL+ A RVAAPAS +S Sbjct: 481 NAALVEEAAAAAESLQDQANNLSQVVSVFKLDANAVALQATSRVAAPASRPVS 533 >ref|YP_001352200.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89954.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 542 Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust. Identities = 279/530 (52%), Positives = 363/530 (68%), Gaps = 4/530 (0%) Query: 3 LSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVDQL 62 ++N+ IR +L L FG++ L++ + +LGQLN +K + D+YPKT++A + ++ Sbjct: 4 IANMKIRQKLTLSFGVVFALLVVITLLSNIQLGQLNNSIKLISKDRYPKTILANSVQIEV 63 Query: 63 NLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLL-TDGDSRAALTTLVTA 121 N IA ++R+I+L +IK +D+ + E L QL + T+ D+R ++ + A Sbjct: 64 NKIALNLRDIMLSSDPAKIKQLVSDTQASDKKMNEGLEQLRAVAQTEEDNRY-VSAAIVA 122 Query: 122 QNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDEV 181 ++ Y RD +L + Q G A L PVQ A DA+ Q +M AGD Sbjct: 123 RDQYVPARDTLLQLAQDGKTAEAKTYLDQVFMPVQVKYFIALDAMFDYQGSLMNVAGDAA 182 Query: 182 ESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAHG 241 + QART++ +LA L + + W +TRSIT PL+ AV VA VA GDL+ + Sbjct: 183 SATSVQARTIINILAGISLLLSIAVGWWVTRSITRPLNTAVGVARRVAQGDLSGPVFVKT 242 Query: 242 RDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASLEET 301 +E L+ ALK MND L IV+QVR T TIA AS EIARGN+DLSSRTE+QA+SLEET Sbjct: 243 TNEVGQLMAALKTMNDNLHHIVTQVRNGTGTIANASGEIARGNMDLSSRTEQQASSLEET 302 Query: 302 ASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDII 361 AS+ME+LT+TV++NA +A QA+QLA SA+ +ARQGG VV V+ TM AI+ SSKKI DI Sbjct: 303 ASAMEELTSTVRENADNAQQANQLAASATKVARQGGSVVHEVIATMAAINTSSKKIADIT 362 Query: 362 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADSV 421 GVID IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSATAA EIKALI DSV Sbjct: 363 GVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSATAAMEIKALIDDSV 422 Query: 422 ARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVTQ 481 A+V NGSKLV+QAG T+ EVV SV + +V IS+A QEQSAGIEQV AIVQ+D+ TQ Sbjct: 423 AKVDNGSKLVQQAGLTIDEVVTSVGSLSGIVAAISNASQEQSAGIEQVGQAIVQIDEGTQ 482 Query: 482 QNAALVEQAAAAAQALQDQAAQLARMVSIFKLEDAAPEPRRVAAPASPRL 531 QNAALVEQ+AAAAQ+L++QA QL ++VSIFKL+ + AAPA+ +L Sbjct: 483 QNAALVEQSAAAAQSLREQADQLMQLVSIFKLDRQSVATS--AAPAAGKL 530 >ref|YP_003776822.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ64914.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 583 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 271/534 (50%), Positives = 370/534 (69%), Gaps = 4/534 (0%) Query: 1 MQLSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVD 60 M+ +N++I RL + F +L++++ + A G+ARL +N + V++D+Y K + I Sbjct: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 Query: 61 QLNLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAALTTLVT 120 +++ +A S+RN LL+ QI +E + I + +L +L+ + +++A L + Sbjct: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 Query: 121 AQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDE 180 + +Y R ++ + G K+ AI +++ E+ P+Q + D L Q ++M + D+ Sbjct: 121 TRKSYAALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 Query: 181 VESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAH 240 E+ Y R ++++ AA IAW I+RSIT PL RAV VAETVAAGDLT+ I AH Sbjct: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 Query: 241 GRDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASLEE 300 DET LL+AL MN +L IV +VR TD++ TAS++IA GNLDLSSRTEEQA++LEE Sbjct: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 Query: 301 TASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDI 360 TASS+E+LT++VKQNA H ++S+LA +AS +A QGG V VV+TMGAI+ SS KIVDI Sbjct: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADS 420 I VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSATAA EIK LI DS Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 Query: 421 VARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVT 480 V +V +G++LV QAG TM VV S+++V +V EIS+A +EQS GIEQVN AI+QMD T Sbjct: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 Query: 481 QQNAALVEQAAAAAQALQDQAAQLARMVSIFKLED---AAPEPRRVAAPASPRL 531 QQNAALVE+AAAAAQALQDQA +L +V +F+L++ + P P V AP +P L Sbjct: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAV-APVAPVL 533 >ref|YP_003777912.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ66004.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 597 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 276/513 (53%), Positives = 360/513 (70%) Query: 1 MQLSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVD 60 M+L ++ I VRL + F +L+ +M + G+ L ++ ++ D+Y K +A +I D Sbjct: 1 MKLKDIKISVRLAVCFAVLIGVMCLITGVGMKSLSSISKSSALIVEDRYEKIALAVEIRD 60 Query: 61 QLNLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAALTTLVT 120 +N AR++RN LL + + +R + E L +++K+L+ R ++ Sbjct: 61 NVNGAARNLRNALLGRNLEEATRYLDRSAANSAKTTEALGKMEKILSTARGRELFQSIQE 120 Query: 121 AQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGDE 180 A++AY RDK+ +++Q KE A+++L +V P Q D + Q +M+ + E Sbjct: 121 ARSAYNTPRDKLRELIKQQKKEEAVELLFTQVIPAQDKYFQVLDQFVAFQKSLMEQSVTE 180 Query: 181 VESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDAH 240 A ++L L+A +A + AW++TRSIT PL+ AV VA VAAGDLT I A Sbjct: 181 GRDTTQSAIAMMLGLSAVAIALCVIAAWLVTRSITRPLNEAVSVASAVAAGDLTVQIGAT 240 Query: 241 GRDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASLEE 300 +DET LL ALK MND L IVS+VR +DTI TAS+EIA GNLDLSSRTEEQA +LEE Sbjct: 241 SKDETGALLAALKSMNDSLHRIVSEVRQGSDTINTASAEIATGNLDLSSRTEEQAGALEE 300 Query: 301 TASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVDI 360 TAS+ME+LT+TVKQNA +A QA+ LA +AS++A QGG VVG VV+TMG I+ +S+KIVDI Sbjct: 301 TASAMEELTSTVKQNADNARQANSLAATASEVAVQGGSVVGQVVQTMGEINDASRKIVDI 360 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIADS 420 I VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA+AA EIKALI DS Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKALIDDS 420 Query: 421 VARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQVT 480 V+RV NGS+LVEQAG TM EVV SV+RV +VV EIS+A EQS GIEQ+N AI QMDQVT Sbjct: 421 VSRVDNGSRLVEQAGTTMTEVVASVRRVTDVVAEISAASNEQSDGIEQINHAITQMDQVT 480 Query: 481 QQNAALVEQAAAAAQALQDQAAQLARMVSIFKL 513 QQNAALVE+AAAAAQ+LQ+Q+ +L+ VS+FKL Sbjct: 481 QQNAALVEEAAAAAQSLQEQSTRLSATVSVFKL 513 >gb|AAK83219.1|AF338038_2 putative methyl-accepting chemotaxis protein I [Rahnella aquatilis] Length = 554 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 251/534 (47%), Positives = 364/534 (68%), Gaps = 7/534 (1%) Query: 3 LSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVDQL 62 ++N+ + RL F L+++L++ ++ + + ++ +N+ ++ +I D+Y K +A D+ D + Sbjct: 5 INNMRVGARLGAAFSLVILLLIIVSVTAVTKISSINSSIEQIISDRYVKVRLAFDVRDGV 64 Query: 63 NLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLL---TDGDSRAALTTLV 119 N + +R I++ + P+ +R D ++++ +DK+ T + + L Sbjct: 65 NDQIKYLRGIVIDTKNPE--QNNKRYLQLDDSVKQTNLAMDKIAAIQTTVVGKQKIKALQ 122 Query: 120 TAQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAGD 179 A + + +++++A+ + G +GA + ++ ++ Q+A ++ A A Q + ++ G Sbjct: 123 DASDIFEAAKEQLVALARAGDMDGATEFVLRKLTTSQNAYLDLASAFANSQDQQLQAEGK 182 Query: 180 EVESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAIDA 239 + ++ A L L+ + + AA + + +TRSIT PL AV+VAE VAAGDLT+ I Sbjct: 183 KAIADGHNAIQLTLIFSVLAILVAAALGFFLTRSITRPLHTAVKVAENVAAGDLTTQIQV 242 Query: 240 HGRDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASLE 299 DET L++ LK MN+ LL IV++VR T+ I +AS EIA GNLDLSSRTE+QA+SLE Sbjct: 243 TSGDETGQLMQGLKNMNENLLKIVTEVRAGTNAIHSASGEIAAGNLDLSSRTEQQASSLE 302 Query: 300 ETASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIVD 359 ETAS+MEQ+TATVKQNA +A QA+QLA AS +A QGGEVVG VV TM I+ASS+KIVD Sbjct: 303 ETASAMEQMTATVKQNADNARQANQLAAQASRVAVQGGEVVGEVVNTMEGINASSRKIVD 362 Query: 360 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIAD 419 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA+AA EIK LI D Sbjct: 363 IIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKEIKVLIDD 422 Query: 420 SVARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQV 479 SVA+V NG++LV +AG TM EVV SV+ V ++V EI+ A EQS GIE++N AI QMD+V Sbjct: 423 SVAKVDNGTQLVAKAGSTMAEVVSSVKSVTDIVGEIAIASNEQSTGIEEINKAITQMDEV 482 Query: 480 TQQNAALVEQAAAAAQALQDQAAQLARMVSIFKLE--DAAPEPRRVAAPASPRL 531 TQQNAALV++A++AA +L +QA +L++ +SIFK+ A R+ A +P L Sbjct: 483 TQQNAALVQEASSAAYSLNEQAERLSQAISIFKVSAGSATAAVRKAAHAKTPAL 536 >ref|YP_001101318.1| methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] emb|CAL63197.1| Methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] Length = 561 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 280/551 (50%), Positives = 363/551 (65%), Gaps = 28/551 (5%) Query: 1 MQLSNVTIRVRLWLGFGLLMVLMLAMAASGIARL---GQLNAQMKD-VIHDKYPKTVVAG 56 MQ N+ I VRL + FGLL+VLM M G+ RL + M++ I ++ + + G Sbjct: 1 MQFKNLKIGVRLGMAFGLLLVLMAFMTVMGVLRLQDVAKATVLMEEATIKERLAQQWIKG 60 Query: 57 DIVDQLNLIARSVRNILLLKREP-QIKSEYERISGADRAIREDLAQLDKLLTDGDSRAAL 115 + + AR VR +P Q K + +S A+ + +L+ L+ + + L Sbjct: 61 IETNTVRTFAR-VRT-----SDPEQDKILQQEMSAISAAVSKQQDELETLVVSAEGKKLL 114 Query: 116 TTLVTAQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMK 175 T+ + Y RD V+ + + G E + + ++++P A + + +A++ Q + Sbjct: 115 ATVAEKRATYTAIRDDVMNLREARGAELQ-NAIANKMKPAADAYIQSVEAVVNAQINNFE 173 Query: 176 TAGDEVESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTS 235 A V++ Y AR LL++L L V+AWM+TRSIT PLD AV VA VA+GDLT Sbjct: 174 DAKGRVDTIYQSARMLLIVLGLVALTLGIVLAWMLTRSITKPLDYAVSVARLVASGDLTG 233 Query: 236 AIDAHGRDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQA 295 I +DET LL+ALK MND L ++QVR DTIATAS++IA GNLDLSSRTEEQA Sbjct: 234 RITVDSKDETGQLLQALKDMNDSLTASITQVRSGVDTIATASNQIASGNLDLSSRTEEQA 293 Query: 296 ASLEETASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSK 355 +SLEETASSME+LT+TVKQNA +A QA+QLA +AS +A +GG VV VV+TM I+ S++ Sbjct: 294 SSLEETASSMEELTSTVKQNADNARQANQLAVTASGVAEKGGTVVSKVVDTMDGINTSAR 353 Query: 356 KIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKA 415 KIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRSA AA EIK Sbjct: 354 KIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKT 413 Query: 416 LIADSVARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQ 475 LI DSV +V GSKLV +AG TM EVV SV+RV +++ EI +A QEQSAGIEQVN AI Q Sbjct: 414 LIDDSVDKVDTGSKLVAEAGTTMVEVVDSVKRVTDIMAEIMAASQEQSAGIEQVNQAIGQ 473 Query: 476 MDQVTQQNAALVEQAAAAAQALQDQAAQLARMVSIFKLEDA----------------APE 519 MDQVTQQNAALVE+AAAAA++L +QAA LA+ VSIFKL+ AP Sbjct: 474 MDQVTQQNAALVEEAAAAAESLNEQAANLAQAVSIFKLDGVANSSRVATRLPVAASNAPA 533 Query: 520 PRRVAAPASPR 530 R+ AA +P+ Sbjct: 534 TRQFAASPAPK 544 >ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] gb|ABE50421.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] Length = 569 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 272/539 (50%), Positives = 359/539 (66%), Gaps = 15/539 (2%) Query: 1 MQLSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVD 60 M+ S++ I VRL GF ++++LM+ M A G+A+L + + K V+ + K + + V Sbjct: 1 MKFSDLRIGVRLGAGFAVILLLMMIMVAFGLAQLANVGSTAKQVVETELKKERITTEWVS 60 Query: 61 QLNLIARSVRNILLLKR-EPQIKSEY-ERISGADRAIREDLAQLDKLLTDGDSRAALTTL 118 N +R + +K + + Y ++I+ RA QL+ LL + +A Sbjct: 61 --NATQNGLRTLAAIKSSDAAMYDMYIQQIAETARANDSLKQQLETLLVKPEGKAKFADA 118 Query: 119 VTAQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVR-PVQSATMNAADALIRQQHEMMKTA 177 +A+ + R ++L + + G + I+ + EV P + A ++ + L+ + ++ A Sbjct: 119 KEKADAFSKVRSELLQLRKDGAEASLIEKNVQEVFLPARKAYFDSMNELLEFERHLIDEA 178 Query: 178 GDEVESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAI 237 G +++ A +L++ + A+ AW ++ IT PL AV++AETVAAGDLTS + Sbjct: 179 GADIQRVKNAASLWMLVIGLVAVVLGAIFAWRLSLGITRPLANAVKLAETVAAGDLTSTL 238 Query: 238 DAHGRDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAAS 297 +DE LL ALK MND L IVS+VR T+TIATASS+IA GNLDLSSRTEEQA+S Sbjct: 239 AIDSKDEIGQLLNALKSMNDNLARIVSEVRSGTETIATASSQIASGNLDLSSRTEEQASS 298 Query: 298 LEETASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKI 357 LEETAS+ME+LT+TVKQNA +A QA+QLA SAS IA QGGEVV V+ TM +I SSK+I Sbjct: 299 LEETASAMEELTSTVKQNADNAQQANQLAVSASGIATQGGEVVDQVIATMQSISESSKRI 358 Query: 358 VDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALI 417 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA AA EIK LI Sbjct: 359 ADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSANAAKEIKGLI 418 Query: 418 ADSVARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMD 477 DSV V GS+LVEQAG TM VV SVQRV ++V+EIS+A EQS GIEQVN AIVQMD Sbjct: 419 TDSVESVDAGSRLVEQAGTTMKHVVDSVQRVTDIVSEISAASHEQSTGIEQVNQAIVQMD 478 Query: 478 QVTQQNAALVEQAAAAAQALQDQAAQLARMVSIFKLED----------AAPEPRRVAAP 526 +VTQQNAALVE+AAAA+Q+LQDQAA LA+ VS+FK+ + P+P V+ P Sbjct: 479 EVTQQNAALVEEAAAASQSLQDQAASLAQAVSVFKVNGMQVQAAVHKVSKPKPVAVSKP 537 >ref|YP_004215574.1| methyl-accepting chemotaxis sensory transducer [Rahnella sp. Y9602] gb|ADW76447.1| methyl-accepting chemotaxis sensory transducer [Rahnella sp. Y9602] Length = 554 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 255/535 (47%), Positives = 363/535 (67%), Gaps = 9/535 (1%) Query: 3 LSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYPKTVVAGDIVDQL 62 ++N+ + RL F L+++L++ ++ I ++ +N ++ +I D+Y K +A D+ D + Sbjct: 5 INNMRVGARLGAAFSLVILLLVIVSGIAITKISSINTSIEQIISDRYVKVRLAFDVRDGV 64 Query: 63 NLIARSVRNILLLKREP-QIKSEYERISGADRAIREDLAQLDKLL---TDGDSRAALTTL 118 N + +R I++ + P Q K Y ++ D +++ +DK+ + + + TL Sbjct: 65 NDQIKYLRGIVIDTKNPEQNKKRYLQL---DDTVKKTNLAMDKIAAIQSTVTGKQKIKTL 121 Query: 119 VTAQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMMKTAG 178 A + +++++A+ + G +GA + ++ ++ Q+A ++ A A Q + ++ G Sbjct: 122 QEAGETFETAKEQLIALARAGDMDGATEFVLRKLTTSQNAYLDLATAFANSQDQQLQAEG 181 Query: 179 DEVESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLTSAID 238 ++ A A L L+ +A + AA + + +TRSIT PL AV+VAE VAAGDLT+ I Sbjct: 182 KTAIADGATAIQLTLIFSALAILMAAALGYFLTRSITRPLHTAVKVAENVAAGDLTTQIQ 241 Query: 239 AHGRDETSMLLRALKKMNDRLLDIVSQVRISTDTIATASSEIARGNLDLSSRTEEQAASL 298 +DET L++ LK MN+ LL IV++VR T+ I +ASSEIA GNLDLSSRTE+QA+SL Sbjct: 242 VMSQDETGQLMQGLKNMNENLLKIVTEVRAGTNAITSASSEIAAGNLDLSSRTEQQASSL 301 Query: 299 EETASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETMGAIDASSKKIV 358 EETAS+MEQ+TATVKQNA +A QA+ LA AS +A QGGEVVG VV TM I+ SS+KIV Sbjct: 302 EETASAMEQMTATVKQNADNARQANLLAAQASRVAVQGGEVVGEVVNTMEGINTSSRKIV 361 Query: 359 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSATAAHEIKALIA 418 DII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR LAQRSA+AA EIK LI Sbjct: 362 DIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKEIKVLID 421 Query: 419 DSVARVGNGSKLVEQAGRTMHEVVQSVQRVGEVVNEISSAGQEQSAGIEQVNLAIVQMDQ 478 DSVA+V NG++LV +AG TM EVV SV+ V ++V EI+ A EQS GIE++N AI QMD+ Sbjct: 422 DSVAKVDNGTQLVAKAGATMAEVVSSVKNVTDIVGEIAIASNEQSTGIEEINKAITQMDE 481 Query: 479 VTQQNAALVEQAAAAAQALQDQAAQLARMVSIFKLE--DAAPEPRRVAAPASPRL 531 VTQQNAALV++A++AA +L +QA +L++ +SIFK+ A R+ SP L Sbjct: 482 VTQQNAALVQEASSAAYSLNEQAERLSQAISIFKVSAGSATAAVRKAGQTKSPAL 536