BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0005.p         (59 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774304.1| transcription activator transcription regula...    97   9e-19
ref|ZP_04576237.1| conserved hypothetical protein [Oxalobacter f...    67   7e-10
ref|YP_004358787.1| Putative phage transcriptional activator Ogr...    64   8e-09
ref|YP_004393095.1| putative phage transcriptional activator Ogr...    64   8e-09

>ref|YP_003774304.1| transcription activator transcription regulator protein
          [Herbaspirillum seropedicae SmR1]
 gb|ADJ62396.1| transcription activator transcription regulator protein
          [Herbaspirillum seropedicae SmR1]
          Length = 86

 Score = 97.1 bits (240), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 52/58 (89%)

Query: 1  MSTLMKEITYRCQNVDCGHTFVATLEISRTVSMSAMPNPEVILPISPRAYLAPQGTGT 58
          MS++MKEITY+CQNV+CGHTFVATLE+SRTVSMSAMPNPEV +PIS RA+LA +   T
Sbjct: 23 MSSMMKEITYQCQNVECGHTFVATLEVSRTVSMSAMPNPEVRIPISSRAFLAAKNQLT 80


>ref|ZP_04576237.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gb|EEO27199.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 80

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 38/46 (82%)

Query: 1  MSTLMKEITYRCQNVDCGHTFVATLEISRTVSMSAMPNPEVILPIS 46
          M  LMKE TYRC+N++CGH FV T+E+SRT+S S MP+P++ +P+S
Sbjct: 23 MGILMKETTYRCKNLECGHVFVCTVEVSRTLSPSGMPDPDIHIPLS 68


>ref|YP_004358787.1| Putative phage transcriptional activator Ogr/Delta [Burkholderia
          gladioli BSR3]
 gb|AEA58831.1| Putative phage transcriptional activator Ogr/Delta [Burkholderia
          gladioli BSR3]
          Length = 82

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 37/47 (78%)

Query: 1  MSTLMKEITYRCQNVDCGHTFVATLEISRTVSMSAMPNPEVILPISP 47
          MS   +E+TY+C NV+CGHT+V  +E +RT+S SAMP+P + LP+SP
Sbjct: 22 MSPTFREVTYQCNNVECGHTYVVNMEFARTLSPSAMPDPTLQLPVSP 68


>ref|YP_004393095.1| putative phage transcriptional activator Ogr/Delta [Aeromonas
          veronii B565]
 gb|AEB50478.1| Putative phage transcriptional activator Ogr/Delta [Aeromonas
          veronii B565]
          Length = 74

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 34/48 (70%)

Query: 1  MSTLMKEITYRCQNVDCGHTFVATLEISRTVSMSAMPNPEVILPISPR 48
          MS L    TY+C NVDCGHTF A  EI  T+S SAMPNP ++LPI PR
Sbjct: 20 MSPLCGIATYQCSNVDCGHTFKAGFEIIATISPSAMPNPAIVLPIVPR 67