BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0003.p (144 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03697130.1| transcriptional regulator, Crp/Fnr family [Lu... 235 2e-60 ref|YP_004693370.1| Crp/Fnr family transcriptional regulator [Ni... 231 2e-59 ref|YP_004474254.1| Crp/Fnr family transcriptional regulator [Ps... 229 1e-58 dbj|GAA16397.1| putative cAMP regulatory protein [Pseudomonas ae... 227 4e-58 ref|ZP_01363719.1| hypothetical protein PaerPA_01000819 [Pseudom... 227 4e-58 ref|YP_261163.1| cyclic nucleotide-binding domain-containing pro... 227 5e-58 ref|ZP_08571235.1| cAMP-binding protein [Rheinheimera sp. A13L] ... 225 2e-57 ref|YP_004380592.1| Crp/Fnr family transcriptional regulator [Ps... 225 2e-57 ref|YP_001141944.1| Crp/FNR family transcriptional regulator [Ae... 222 2e-56 ref|ZP_08571239.1| cAMP-binding protein [Rheinheimera sp. A13L] ... 219 8e-56 >ref|ZP_03697130.1| transcriptional regulator, Crp/Fnr family [Lutiella nitroferrum 2002] gb|EEG09616.1| transcriptional regulator, Crp/Fnr family [Lutiella nitroferrum 2002] Length = 249 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 110/138 (79%), Positives = 124/138 (89%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G A+RL+ RFK+E +R T L LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGHAFRLAGPRFKDEVNRHTELLQLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ+TMTQELIANMLGVRREGVT+AAGKLQ+ GVIEYSRG +TVL+RP+LE+ Sbjct: 157 LLSLDRLPSNQLTMTQELIANMLGVRREGVTDAAGKLQKLGVIEYSRGHITVLDRPKLEQ 216 Query: 121 LCCECYAVVRKETQRLLP 138 LCCECYAVV+KET RLLP Sbjct: 217 LCCECYAVVKKETDRLLP 234 >ref|YP_004693370.1| Crp/Fnr family transcriptional regulator [Nitrosomonas sp. Is79A3] gb|AEI99970.1| transcriptional regulator, Crp/Fnr family [Nitrosomonas sp. Is79A3] Length = 242 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 109/138 (78%), Positives = 124/138 (89%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL SR KEEF+R TG L LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 100 VQSAGHAYRLLESRLKEEFNRHTGFLLLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 159 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ+TMTQELIANMLGVRREGVT+AA KLQ+ GVIEY+RG +TV++RP+LE+ Sbjct: 160 LLSLDRLPDNQLTMTQELIANMLGVRREGVTDAASKLQKLGVIEYNRGHITVMDRPKLEQ 219 Query: 121 LCCECYAVVRKETQRLLP 138 LCCECY+VV++ET RLLP Sbjct: 220 LCCECYSVVKRETDRLLP 237 >ref|YP_004474254.1| Crp/Fnr family transcriptional regulator [Pseudomonas fulva 12-X] gb|AEF22160.1| transcriptional regulator, Crp/Fnr family [Pseudomonas fulva 12-X] Length = 240 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/137 (81%), Positives = 123/137 (89%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQSGG AYRL A R KEEF+R L LMLRY+QAL+TQM+QTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSGGYAYRLPAPRLKEEFNRHGEFLVLMLRYTQALITQMSQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL GNQ+TMTQELIANMLGVRREGVTEAAGKLQRQGVI+YSRG +TVLNR +LE+ Sbjct: 157 LLSLDRLPGNQLTMTQELIANMLGVRREGVTEAAGKLQRQGVIKYSRGHITVLNRKQLEQ 216 Query: 121 LCCECYAVVRKETQRLL 137 L CECYAVV++ET RLL Sbjct: 217 LSCECYAVVKRETDRLL 233 >dbj|GAA16397.1| putative cAMP regulatory protein [Pseudomonas aeruginosa NCMG1179] Length = 242 Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 109/143 (76%), Positives = 123/143 (86%), Gaps = 2/143 (1%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL + K+EF+R L LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 100 VQSAGHAYRLPGQKLKDEFNRHGEMLQLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 159 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ++MTQELIANMLGVRREGVTEAAGKLQ+ GVI+YSRG +TVL+RP+LE Sbjct: 160 LLSLDRLPSNQLSMTQELIANMLGVRREGVTEAAGKLQKLGVIKYSRGHITVLDRPQLEA 219 Query: 121 LCCECYAVVRKETQRLLP--PTR 141 LCCECYAVV++ET RLLP P R Sbjct: 220 LCCECYAVVKRETDRLLPYLPAR 242 >ref|ZP_01363719.1| hypothetical protein PaerPA_01000819 [Pseudomonas aeruginosa PACS2] gb|AAP22585.1| putative cAMP regulatory protein [Pseudomonas aeruginosa] Length = 239 Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 109/143 (76%), Positives = 123/143 (86%), Gaps = 2/143 (1%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL + K+EF+R L LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGHAYRLPGQKLKDEFNRHGEMLQLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ++MTQELIANMLGVRREGVTEAAGKLQ+ GVI+YSRG +TVL+RP+LE Sbjct: 157 LLSLDRLPSNQLSMTQELIANMLGVRREGVTEAAGKLQKLGVIKYSRGHITVLDRPQLEA 216 Query: 121 LCCECYAVVRKETQRLLP--PTR 141 LCCECYAVV++ET RLLP P R Sbjct: 217 LCCECYAVVKRETDRLLPYLPAR 239 >ref|YP_261163.1| cyclic nucleotide-binding domain-containing protein [Pseudomonas fluorescens Pf-5] gb|AAY93327.1| cyclic nucleotide-binding domain protein [Pseudomonas fluorescens Pf-5] Length = 245 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 109/138 (78%), Positives = 120/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G A RL R K+EF+R L LMLRY+Q+L+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGHALRLPGQRLKDEFNRHGEMLLLMLRYTQSLITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL GNQ+ MTQELIANMLGVRREGVTEAAGKLQRQG+IEYSRGR+ VL+RPRLE+ Sbjct: 157 LLSLDRLPGNQLVMTQELIANMLGVRREGVTEAAGKLQRQGIIEYSRGRINVLDRPRLEQ 216 Query: 121 LCCECYAVVRKETQRLLP 138 CECY VVRKET+RLLP Sbjct: 217 HSCECYGVVRKETERLLP 234 >ref|ZP_08571235.1| cAMP-binding protein [Rheinheimera sp. A13L] gb|EGM77356.1| cAMP-binding protein [Rheinheimera sp. A13L] Length = 242 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/138 (78%), Positives = 118/138 (85%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL A R K+EFHR LH LRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGQAYRLLAHRVKDEFHRHGALLHTFLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL GN++ MTQELIANMLGVRREGVT+AAG+LQR GVIEY RG + VLNRP+LE Sbjct: 157 LLSLDRLEGNELRMTQELIANMLGVRREGVTDAAGRLQRLGVIEYHRGLIQVLNRPKLES 216 Query: 121 LCCECYAVVRKETQRLLP 138 L CECYAVVRKE+ RLLP Sbjct: 217 LSCECYAVVRKESDRLLP 234 >ref|YP_004380592.1| Crp/Fnr family transcriptional regulator [Pseudomonas mendocina NK-01] gb|AEB58840.1| transcriptional regulator, Crp/Fnr family protein [Pseudomonas mendocina NK-01] Length = 242 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/138 (79%), Positives = 119/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQSGG A+RL K EF R L LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSGGHAFRLKGPLLKAEFDRHGELLVLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ+TMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRG +TVL+R +LE+ Sbjct: 157 LLSLDRLPSNQLTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGHITVLDRHKLEQ 216 Query: 121 LCCECYAVVRKETQRLLP 138 L CECYAVV+KET RLLP Sbjct: 217 LSCECYAVVKKETDRLLP 234 >ref|YP_001141944.1| Crp/FNR family transcriptional regulator [Aeromonas salmonicida subsp. salmonicida A449] gb|ABO90196.1| transcriptional regulator, Crp/Fnr family [Aeromonas salmonicida subsp. salmonicida A449] Length = 256 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 106/138 (76%), Positives = 119/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYR+ K EF+ LHLMLRY+Q+LLTQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGYAYRMKGQLLKTEFNVHGDLLHLMLRYTQSLLTQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ+TMTQELIANMLGVRREGVTEAAGKLQ+ GVIEY RG++TVL+RP+LE Sbjct: 157 LLSLDRLPSNQLTMTQELIANMLGVRREGVTEAAGKLQKLGVIEYRRGQITVLDRPKLER 216 Query: 121 LCCECYAVVRKETQRLLP 138 L CECY+VV+KET+RLLP Sbjct: 217 LSCECYSVVKKETERLLP 234 >ref|ZP_08571239.1| cAMP-binding protein [Rheinheimera sp. A13L] gb|EGM77360.1| cAMP-binding protein [Rheinheimera sp. A13L] Length = 242 Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 104/138 (75%), Positives = 119/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL + R K+EF+R LH +LRY+Q+L+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGQAYRLLSQRLKDEFNRHGALLHTLLRYTQSLITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL GN++ MTQELIANMLGVRREGVT+AAG+LQR GVIEY RGR+ VL+R +LE Sbjct: 157 LLSLDRLEGNELVMTQELIANMLGVRREGVTDAAGRLQRLGVIEYHRGRIQVLDRAKLES 216 Query: 121 LCCECYAVVRKETQRLLP 138 L CECYAVVRKE+ RLLP Sbjct: 217 LSCECYAVVRKESDRLLP 234