BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0328.p (384 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777685.1| D-alanyl-D-alanine carboxypeptidase (penicil... 785 0.0 ref|YP_004754858.1| D-alanyl-D-alanine carboxypeptidase [Collimo... 561 e-158 ref|YP_001354938.1| D-alanyl-D-alanine carboxypeptidase [Janthin... 532 e-149 ref|YP_001101230.1| D-alanyl-D-alanine carboxypeptidase [Hermini... 520 e-145 ref|ZP_08274257.1| D-alanyl-D-alanine carboxypeptidase [Oxalobac... 517 e-144 ref|YP_294506.1| penicillin-binding protein 6 [Ralstonia eutroph... 462 e-128 ref|YP_001631930.1| penicillin-binding protein precursor [Bordet... 462 e-128 gb|EGP48029.1| D-alanyl-D-alanine carboxypeptidase DacC 1 [Achro... 459 e-127 ref|YP_004684162.1| D-alanyl-D-alanine carboxypeptidase DacC [Cu... 456 e-126 ref|YP_724821.1| D-alanyl-D-alanine carboxypeptidase (serine-typ... 456 e-126 >ref|YP_003777685.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding) transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65777.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding) transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 384 Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/384 (100%), Positives = 384/384 (100%) Query: 1 MKKLLAALAATVLSISTLTASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASL 60 MKKLLAALAATVLSISTLTASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASL Sbjct: 1 MKKLLAALAATVLSISTLTASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASL 60 Query: 61 TKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISV 120 TKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISV Sbjct: 61 TKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISV 120 Query: 121 SGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILC 180 SGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILC Sbjct: 121 SGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILC 180 Query: 181 RNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAH 240 RNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAH Sbjct: 181 RNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAH 240 Query: 241 RPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQ 300 RPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQ Sbjct: 241 RPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQ 300 Query: 301 GKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPV 360 GKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPV Sbjct: 301 GKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPV 360 Query: 361 VALESVGPAGFIGRAWDSLRLMFK 384 VALESVGPAGFIGRAWDSLRLMFK Sbjct: 361 VALESVGPAGFIGRAWDSLRLMFK 384 >ref|YP_004754858.1| D-alanyl-D-alanine carboxypeptidase [Collimonas fungivorans Ter331] gb|AEK64035.1| D-alanyl-D-alanine carboxypeptidase [Collimonas fungivorans Ter331] Length = 381 Score = 561 bits (1446), Expect = e-158, Method: Compositional matrix adjust. Identities = 277/384 (72%), Positives = 326/384 (84%), Gaps = 3/384 (0%) Query: 1 MKKLLAALAATVLSISTLTASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASL 60 MKK+LAALAATVLSIS A AQ+LPPPTVAAKSWLLLD ++NQV+AS DPD R+EPASL Sbjct: 1 MKKILAALAATVLSISV--AFAQTLPPPTVAAKSWLLLDTTSNQVVASQDPDMRIEPASL 58 Query: 61 TKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISV 120 K+MTAY+ F AL+DK+++L+Q V+VSV AWKVDPSSSKMFIEPN PVSI++LLYGL+ V Sbjct: 59 AKIMTAYVVFDALKDKKITLDQMVNVSVRAWKVDPSSSKMFIEPNTPVSINDLLYGLMVV 118 Query: 121 SGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILC 180 SGNDAAVA+AEAV+GTED+FV LMN EA+R G+ +THF NPHGLPS DTY+TARDL+ L Sbjct: 119 SGNDAAVALAEAVAGTEDSFVALMNHEAERMGMKSTHFGNPHGLPSADTYSTARDLATLA 178 Query: 181 RNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAH 240 ++I DFPE+YK S KK+TYN ITQPNRNRLLWLDPTVDGMKTGHTSSAGYS+I SA Sbjct: 179 AHVIVDFPEFYK-IDSTKKYTYNKITQPNRNRLLWLDPTVDGMKTGHTSSAGYSIIASAK 237 Query: 241 RPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQ 300 RP G+RRL++VVIGT SD RTQE+QKLLNWGFQNFDAVKLYAKGQ +DTP VWKG++ Sbjct: 238 RPNAGGDRRLLAVVIGTNSDGTRTQEAQKLLNWGFQNFDAVKLYAKGQAIDTPQVWKGAK 297 Query: 301 GKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPV 360 +IK+GF +DVY+T+PKG ADK+K L+R DPLIAPI + AKVGT+KV D KT+ E PV Sbjct: 298 SQIKIGFTHDVYVTVPKGIADKIKPVLERTDPLIAPIQQNAKVGTVKVNADGKTIAEFPV 357 Query: 361 VALESVGPAGFIGRAWDSLRLMFK 384 VALE V A GRAWDS+RL+FK Sbjct: 358 VALEDVAQATIFGRAWDSIRLLFK 381 >ref|YP_001354938.1| D-alanyl-D-alanine carboxypeptidase [Janthinobacterium sp. Marseille] gb|ABR89520.1| D-alanyl-D-alanine carboxypeptidase (peptidase family s11) [Janthinobacterium sp. Marseille] Length = 382 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 264/382 (69%), Positives = 319/382 (83%), Gaps = 4/382 (1%) Query: 1 MKKLLAALAATVLSISTLTASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASL 60 MKKLLAA+AATVLS+S+ A AQS+P PT+ AKSWLLLDA++NQV+AS++PD R+EPASL Sbjct: 1 MKKLLAAIAATVLSLSS--AFAQSVPSPTINAKSWLLLDATSNQVLASNEPDMRIEPASL 58 Query: 61 TKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISV 120 TKLMTAY+AF A++DK+L L Q +++S NAWKVDPSSSKMFIEP PV +++LLYGLI Sbjct: 59 TKLMTAYVAFTAIQDKKLDLNQMITISTNAWKVDPSSSKMFIEPRVPVKVNDLLYGLIVQ 118 Query: 121 SGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILC 180 SGNDAAVA+AEAV+GTEDAFV LMNREA+R G+ +THF+NPHGLPS Y+TARDLS+L Sbjct: 119 SGNDAAVAIAEAVAGTEDAFVALMNREAERMGMKSTHFANPHGLPSASNYSTARDLSVLA 178 Query: 181 RNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAH 240 +LIND PE+YK YS K++TYNNI QPNRNRLLWLDPTVDGMKTG+T AGY LI++A Sbjct: 179 SHLINDHPEFYK-IYSTKEYTYNNIKQPNRNRLLWLDPTVDGMKTGYTQGAGYCLISTAK 237 Query: 241 RPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQ 300 RP GERRLISVV+GT+SDQ R QESQKLLNWGF NFD VKLYAK +P+ TP+VWKG+Q Sbjct: 238 RPNGTGERRLISVVLGTISDQARAQESQKLLNWGFLNFDTVKLYAKNEPIATPNVWKGTQ 297 Query: 301 GKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKV-TIDDKTVTELP 359 IK+GF DVYIT+PKG A+ +K L R DPL+API + ++VGT+KV + D K V+ELP Sbjct: 298 NSIKIGFTRDVYITVPKGVANTMKPVLARKDPLVAPIDKNSQVGTIKVMSADGKVVSELP 357 Query: 360 VVALESVGPAGFIGRAWDSLRL 381 V+ALE VG AG GRA DS+RL Sbjct: 358 VLALEQVGQAGLFGRALDSIRL 379 >ref|YP_001101230.1| D-alanyl-D-alanine carboxypeptidase [Herminiimonas arsenicoxydans] emb|CAL63109.1| Putative penicillin-binding (D-alanyl-d-alanine carboxypeptidase) transmembrane protein [Herminiimonas arsenicoxydans] Length = 382 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 258/382 (67%), Positives = 315/382 (82%), Gaps = 4/382 (1%) Query: 1 MKKLLAALAATVLSISTLTASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASL 60 MKKL AALA VLS+ST A AQ +P PT+AAKSWLLLDA++NQ++AS++ D R+EPASL Sbjct: 1 MKKLFAALAVAVLSLST--AFAQVVPAPTIAAKSWLLLDATSNQILASNEADVRIEPASL 58 Query: 61 TKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISV 120 TKLMTAY+AF+A++DKR++L Q ++VS NAWKVDP SSKMFIEP PVS+++LLYGLI Sbjct: 59 TKLMTAYVAFSAIQDKRIALNQMITVSTNAWKVDPESSKMFIEPRVPVSVNDLLYGLIVQ 118 Query: 121 SGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILC 180 SGNDAAVA+AEAV+GTEDAF LMNREA+R G+ +T F+NPHGLPSP+ Y+TARDL++L Sbjct: 119 SGNDAAVALAEAVAGTEDAFAALMNREAERMGMKSTRFANPHGLPSPNNYSTARDLAVLA 178 Query: 181 RNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAH 240 +L++D PE+YK YS K FTYN I Q NRNRLLWLDPTVDGMKTG+T +AGY LI++A Sbjct: 179 THLVSDHPEFYK-IYSTKDFTYNKIKQSNRNRLLWLDPTVDGMKTGYTQNAGYCLISTAK 237 Query: 241 RPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQ 300 RP ERRLISVVIGT SDQ R QESQKLLNWGFQNFDAVKLY+K +DTP+VWKGSQ Sbjct: 238 RPNGANERRLISVVIGTASDQARAQESQKLLNWGFQNFDAVKLYSKDVAIDTPNVWKGSQ 297 Query: 301 GKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKV-TIDDKTVTELP 359 KIK+GF DV++T+PKG A K+K L R DPL+API + + VGT+KV + ++K + ELP Sbjct: 298 NKIKIGFTRDVFVTVPKGMAGKIKPVLARKDPLVAPIDKNSPVGTVKVMSAENKVIAELP 357 Query: 360 VVALESVGPAGFIGRAWDSLRL 381 V+ALE VGPAG GRA DS+RL Sbjct: 358 VLALEQVGPAGMFGRALDSIRL 379 >ref|ZP_08274257.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32266.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium IMCC9480] Length = 403 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 256/384 (66%), Positives = 311/384 (80%), Gaps = 4/384 (1%) Query: 1 MKKLLAALAATVLSISTL---TASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEP 57 MK +AALAATV+S+S++ ASAQ++P P VAAKSWLLLD ++ QV+AS DP R+EP Sbjct: 18 MKIFIAALAATVISLSSVFVQPASAQTMPAPIVAAKSWLLLDTTSGQVLASQDPTMRIEP 77 Query: 58 ASLTKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGL 117 ASLTK+MTAY+ F A+++KRL L Q V+VSV AWKVDPSSSKMFI+P PVS+D+LL+GL Sbjct: 78 ASLTKIMTAYVTFQAIKEKRLDLAQMVNVSVRAWKVDPSSSKMFIDPATPVSVDDLLHGL 137 Query: 118 ISVSGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLS 177 + SGNDAAVA+AEAV+GTE+AFV LMNREA+R GLTNT F NPHGLPS Y+TA+DLS Sbjct: 138 MVQSGNDAAVALAEAVAGTEEAFVVLMNREAKRMGLTNTQFGNPHGLPSQSNYSTAQDLS 197 Query: 178 ILCRNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLIT 237 L +I D+PE+YK SVK FTYN ITQPNRNRLLWLDP+VDGMKTGHT +AGY +I Sbjct: 198 KLAAAVITDYPEFYK-IDSVKSFTYNKITQPNRNRLLWLDPSVDGMKTGHTEAAGYCIIA 256 Query: 238 SAHRPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWK 297 SA RP +GERRLISVV+G SDQ RTQESQKLLNWGFQNFD VKLY KGQPV+TP VWK Sbjct: 257 SAKRPNGSGERRLISVVLGANSDQSRTQESQKLLNWGFQNFDTVKLYGKGQPVETPPVWK 316 Query: 298 GSQGKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTE 357 GS+ IK+GF D+Y+T+ KG A K+K L+R DPL+APIA +KVG +K+ +D K++ E Sbjct: 317 GSEKTIKIGFTQDIYVTVAKGVAAKMKPVLERKDPLVAPIAANSKVGMMKMMVDGKSIAE 376 Query: 358 LPVVALESVGPAGFIGRAWDSLRL 381 P++ALE+V AG GRAWDS+RL Sbjct: 377 FPILALENVNEAGIFGRAWDSIRL 400 >ref|YP_294506.1| penicillin-binding protein 6 [Ralstonia eutropha JMP134] gb|AAZ59662.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11 [Ralstonia eutropha JMP134] Length = 399 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 221/365 (60%), Positives = 278/365 (76%), Gaps = 4/365 (1%) Query: 23 QSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASLTKLMTAYLAFAALRDKRLSLEQ 82 Q +P P VAAKSW+L D ++ Q +AS + D R+EPASLTKLMTAYLAF AL++KRL+L+Q Sbjct: 34 QGVPMPQVAAKSWMLFDVTSGQALASQNADQRIEPASLTKLMTAYLAFEALKEKRLTLDQ 93 Query: 83 EVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISVSGNDAAVAVAEAVSGTEDAFVQ 142 V + KV S+MFIEPNKPVS+ +LL GLI SGNDAA+A+AEAV G+E+ FV Sbjct: 94 AVVPTTLVLKVKSDESRMFIEPNKPVSVQDLLMGLIVQSGNDAALALAEAVGGSEEGFVA 153 Query: 143 LMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILCRNLINDFPEYYKRYYSVKKFTY 202 +MNREAQR G+ NTHF+N G+P P+ YTTA DL+ L LI DFPEYY YS K+FTY Sbjct: 154 MMNREAQRMGMKNTHFTNTDGIPDPNHYTTAVDLATLTTRLIQDFPEYYG-MYSQKEFTY 212 Query: 203 NNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAHRP---VPNGERRLISVVIGTVS 259 N I QPNRNRLL++DPTVDG+KTGHT SAGY LI+SA RP VPNG RRLISVVIGT + Sbjct: 213 NKIKQPNRNRLLYIDPTVDGVKTGHTKSAGYCLISSAKRPLANVPNGSRRLISVVIGTTT 272 Query: 260 DQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQGKIKVGFKNDVYITIPKGT 319 +QVRTQES K+LN+GFQ FD ++LY KGQ + TPD++KG G +K+G +N+ ++T+PKGT Sbjct: 273 EQVRTQESLKILNYGFQFFDTLRLYDKGQVLATPDIYKGKAGTVKIGVQNETFVTVPKGT 332 Query: 320 ADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPVVALESVGPAGFIGRAWDSL 379 ++K L+R + LIAPIA G +VG++K+ + V E PVVALE V AGF GR WD++ Sbjct: 333 GGRLKPVLERQELLIAPIAAGQQVGSVKLMDGNTKVAEFPVVALEEVPEAGFFGRLWDTI 392 Query: 380 RLMFK 384 RL FK Sbjct: 393 RLWFK 397 >ref|YP_001631930.1| penicillin-binding protein precursor [Bordetella petrii DSM 12804] emb|CAP43662.1| penicillin-binding protein precursor [Bordetella petrii] Length = 371 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 219/364 (60%), Positives = 282/364 (77%), Gaps = 2/364 (0%) Query: 20 ASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASLTKLMTAYLAFAALRDKRLS 79 ASAQ+ P V AK+W+LLDA++ Q +AS + DTRVEPASLTK+MTAYL F ALRD RLS Sbjct: 5 ASAQAQVAPPVTAKAWMLLDATSGQEMASFNADTRVEPASLTKVMTAYLVFQALRDGRLS 64 Query: 80 LEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISVSGNDAAVAVAEAVSGTEDA 139 +Q V+VS AWKV P SSKMF+EP K VS+++LL+GL+ SGNDAA+ +AEAVSG+ +A Sbjct: 65 TQQLVTVSTRAWKVAPGSSKMFLEPGKRVSVNDLLFGLLVQSGNDAAIVLAEAVSGSVEA 124 Query: 140 FVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILCRNLINDFPEYYKRYYSVKK 199 FVQ MN++A + GL +THF++PHGLP P TY+TARDL++L R L+ D+P+ YK Y S + Sbjct: 125 FVQRMNQQAAQMGLRDTHFASPHGLPDPGTYSTARDLALLARRLVRDYPDLYKTYDSART 184 Query: 200 FTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAHRPVPNGERRLISVVIGTVS 259 FTYNNI+QPNRNRLLWLDP+VDG+KTGHT +AGY LI SA RP RRLISVV+GT S Sbjct: 185 FTYNNISQPNRNRLLWLDPSVDGLKTGHTDAAGYCLIASAERPDGQSRRRLISVVMGTAS 244 Query: 260 DQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQGKIKVGFKNDVYITIPKGT 319 D++RT+ES+ LLNWGFQNF +KLYAKGQ V++P VWKG + +++G ND YIT P Sbjct: 245 DKLRTEESRVLLNWGFQNFKTIKLYAKGQAVESPQVWKGERDTVRIGVANDAYITAP--V 302 Query: 320 ADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPVVALESVGPAGFIGRAWDSL 379 + +VK + R PL+APIA +VG+L+V +D K + PVVAL++V AG +GRAWDS+ Sbjct: 303 SAEVKPVVTRRQPLVAPIAAQDQVGSLQVLVDGKPAMQWPVVALDAVPQAGLVGRAWDSV 362 Query: 380 RLMF 383 RL + Sbjct: 363 RLWW 366 >gb|EGP48029.1| D-alanyl-D-alanine carboxypeptidase DacC 1 [Achromobacter xylosoxidans AXX-A] Length = 385 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/384 (58%), Positives = 281/384 (73%), Gaps = 4/384 (1%) Query: 1 MKKLLAALAATVLSISTLTASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASL 60 MKKL A+L +S A AQS+P P ++AK+WLLLD ++ QVIAS R+EPASL Sbjct: 3 MKKLAASLLVATACMSG--ALAQSMPQPDLSAKAWLLLDETSGQVIASHAATARIEPASL 60 Query: 61 TKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISV 120 TK+MTAY+ F+A+ +K LS +Q+V++S AWKV P SSKMF+EP VS+D LL GL+ Sbjct: 61 TKIMTAYVVFSAIHNKELSPDQKVTISTRAWKVPPGSSKMFLEPGSRVSVDQLLRGLMIQ 120 Query: 121 SGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILC 180 SGNDAA+A+AEAVSG+ +AFV MN A + GL THF++PHGLP P TY+T DLSIL Sbjct: 121 SGNDAAIALAEAVSGSVEAFVARMNDTAVQLGLHGTHFASPHGLPDPGTYSTVSDLSILA 180 Query: 181 RNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAH 240 I D+PE YK Y S K FTYNNITQPNRNRLLWLDP+VDG+KTGHT +AGY ++ +AH Sbjct: 181 TRFIRDYPELYKTYDSAKTFTYNNITQPNRNRLLWLDPSVDGLKTGHTDAAGYCIVATAH 240 Query: 241 RPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQ 300 RP +RRLI+VV+GT SD++RTQES++LL WGFQ F+ +KLYAKGQ V TP+VWKG Sbjct: 241 RPNGRDQRRLITVVVGTASDKLRTQESRELLEWGFQGFNTIKLYAKGQAVATPEVWKGQV 300 Query: 301 GKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPV 360 +K GF D Y+T+P G KV+ DPL+APIA A VG+L+V +D K + PV Sbjct: 301 DTLKAGFARDAYVTVPAGA--KVEPIWTPQDPLVAPIAAQATVGSLRVMVDGKPAMQFPV 358 Query: 361 VALESVGPAGFIGRAWDSLRLMFK 384 VALE V AGF GRAWDS+RL ++ Sbjct: 359 VALEPVAEAGFAGRAWDSIRLWWR 382 >ref|YP_004684162.1| D-alanyl-D-alanine carboxypeptidase DacC [Cupriavidus necator N-1] gb|AEI75681.1| D-alanyl-D-alanine carboxypeptidase DacC [Cupriavidus necator N-1] Length = 399 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 217/365 (59%), Positives = 276/365 (75%), Gaps = 4/365 (1%) Query: 23 QSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASLTKLMTAYLAFAALRDKRLSLEQ 82 Q +P P VAAKSW+L D ++ Q +AS + D R+EPASLTKLMTAYLAF AL++KRL+L+Q Sbjct: 34 QGVPMPQVAAKSWMLYDVTSGQALASQNADARIEPASLTKLMTAYLAFEALKEKRLTLDQ 93 Query: 83 EVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISVSGNDAAVAVAEAVSGTEDAFVQ 142 V + KV S+MFIEPNKPV++ +LL GLI SGNDAA+A+AEAV G+E+ FV Sbjct: 94 SVVPTSLVLKVKSDESRMFIEPNKPVTVQDLLLGLIVQSGNDAALALAEAVGGSEEGFVA 153 Query: 143 LMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILCRNLINDFPEYYKRYYSVKKFTY 202 +MNREAQR G+ NTHF+N G+P P+ YTTA DL+ L LI DFPEYY YS K+FTY Sbjct: 154 MMNREAQRMGMKNTHFTNTDGIPDPNHYTTAVDLATLTTRLIKDFPEYYA-MYSQKEFTY 212 Query: 203 NNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAHRP---VPNGERRLISVVIGTVS 259 N I QPNRNRLL++DPTVDG+KTGHT SAGY LI+SA RP VP+G RRLIS+VIGT + Sbjct: 213 NKIRQPNRNRLLYIDPTVDGVKTGHTKSAGYCLISSAKRPLANVPDGSRRLISIVIGTTT 272 Query: 260 DQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQGKIKVGFKNDVYITIPKGT 319 +QVRTQES K+LN+GFQ FD ++LY KGQ + TPD++KG G +K+G +N+ ++T+PKGT Sbjct: 273 EQVRTQESLKILNYGFQFFDTLRLYDKGQVLATPDIYKGKSGTVKIGVQNETFVTVPKGT 332 Query: 320 ADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPVVALESVGPAGFIGRAWDSL 379 ++K L+R + LIAPI+ G +VG +K+ V E PVVALE V AGF GR WD++ Sbjct: 333 GGRLKPVLERQELLIAPISAGQQVGMVKLMDGTNKVAEFPVVALEEVPEAGFFGRLWDTI 392 Query: 380 RLMFK 384 RL FK Sbjct: 393 RLWFK 397 >ref|YP_724821.1| D-alanyl-D-alanine carboxypeptidase (serine-type) [Ralstonia eutropha H16] emb|CAJ91453.1| D-Alanyl-D-alanine carboxypeptidase (serine-type) [Ralstonia eutropha H16] Length = 399 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 217/365 (59%), Positives = 276/365 (75%), Gaps = 4/365 (1%) Query: 23 QSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPASLTKLMTAYLAFAALRDKRLSLEQ 82 Q +P P VAAKSW+L D ++ Q +AS + D R+EPASLTKLMTAYLAF AL++KRL+L+Q Sbjct: 34 QGVPMPQVAAKSWMLYDVTSGQALASQNADARIEPASLTKLMTAYLAFEALKEKRLTLDQ 93 Query: 83 EVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLISVSGNDAAVAVAEAVSGTEDAFVQ 142 V + KV S+MFIEPNKPV++ +LL GLI SGNDAA+A+AEAV G+E+ FV Sbjct: 94 AVVPTSVVLKVKSDESRMFIEPNKPVTVQDLLLGLIVQSGNDAALALAEAVGGSEEGFVA 153 Query: 143 LMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSILCRNLINDFPEYYKRYYSVKKFTY 202 +MNREAQR G+ NTHF+N G+P P+ YTTA DL+ L LI DFPEYY YS K+FTY Sbjct: 154 MMNREAQRMGMKNTHFTNTDGIPDPNHYTTAVDLATLTTRLIKDFPEYYA-MYSQKEFTY 212 Query: 203 NNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSAHRP---VPNGERRLISVVIGTVS 259 N I QPNRNRLL++DPTVDG+KTGHT SAGY LI+SA RP VP+G RRLIS+VIGT + Sbjct: 213 NKIRQPNRNRLLYIDPTVDGVKTGHTKSAGYCLISSAKRPLANVPDGSRRLISIVIGTTT 272 Query: 260 DQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGSQGKIKVGFKNDVYITIPKGT 319 +QVRTQES K+LN+GFQ FD ++LY KGQ + TPD++KG G +K+G +N+ ++T+PKGT Sbjct: 273 EQVRTQESLKILNYGFQFFDTLRLYDKGQVLATPDIYKGKSGTVKIGVQNETFVTVPKGT 332 Query: 320 ADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDKTVTELPVVALESVGPAGFIGRAWDSL 379 ++K L+R + LIAPI+ G +VG +K+ V E PVVALE V AGF GR WD++ Sbjct: 333 GGRLKPVLERQELLIAPISAGQQVGMVKLMDGTNKVAEFPVVALEEVPEAGFFGRLWDTI 392 Query: 380 RLMFK 384 RL FK Sbjct: 393 RLWFK 397