BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0306.p (117 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777665.1| transmembrane protein [Herbaspirillum serope... 217 4e-55 ref|ZP_04579726.1| conserved hypothetical protein [Oxalobacter f... 156 1e-36 ref|YP_004754672.1| hypothetical protein CFU_4027 [Collimonas fu... 140 6e-32 gb|AAT42398.1| putative membrane protein [Collimonas fungivorans... 139 1e-31 ref|YP_001354885.1| hypothetical protein mma_3195 [Janthinobacte... 139 1e-31 ref|ZP_02887172.1| membrane protein of unknown function [Burkhol... 137 5e-31 ref|YP_003908554.1| membrane protein [Burkholderia sp. CCGE1003]... 137 8e-31 ref|YP_001897369.1| hypothetical protein Bphyt_3757 [Burkholderi... 136 8e-31 ref|YP_003606531.1| membrane protein of unknown function [Burkho... 136 1e-30 ref|ZP_03575412.1| putative membrane protein [Burkholderia multi... 135 2e-30 >ref|YP_003777665.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65757.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 117 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 116/117 (99%), Positives = 117/117 (100%) Query: 1 VRLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV 60 +RLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV Sbjct: 1 MRLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV 60 Query: 61 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLLLKSGPNQ 117 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLLLKSGPNQ Sbjct: 61 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLLLKSGPNQ 117 >ref|ZP_04579726.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gb|EEO30699.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 113 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 76/113 (67%), Positives = 102/113 (90%) Query: 1 VRLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV 60 +R+L+ WLIN +ALL +PYLM S+++ F +AL+AAL+LG VN ++RP+LVVLTLPVT+V Sbjct: 1 MRILIVWLINTVALLVLPYLMTSIRISGFWTALIAALVLGLVNALIRPILVVLTLPVTLV 60 Query: 61 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLLLKS 113 TLGLFI VINGL+FW+V+++V GF+V+GFW+A+GGALLYSI+SWALSTLLLK+ Sbjct: 61 TLGLFIFVINGLLFWLVSRMVDGFYVSGFWAAIGGALLYSIISWALSTLLLKN 113 >ref|YP_004754672.1| hypothetical protein CFU_4027 [Collimonas fungivorans Ter331] gb|AEK63849.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 122 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 87/114 (76%), Positives = 104/114 (91%) Query: 1 VRLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV 60 +RLL+TWLIN LALLAVPYLMHSVQ SFG+AL+AAL+LGFVNT++RP+L++LTLP T++ Sbjct: 9 MRLLITWLINTLALLAVPYLMHSVQFASFGAALIAALVLGFVNTLIRPILLLLTLPATLL 68 Query: 61 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLLLKSG 114 TLGLFI +INGLMFW+V+ LV GF+VA FWSAVGGA+LYSIVSWALSTLLLK Sbjct: 69 TLGLFIFIINGLMFWLVSHLVSGFYVASFWSAVGGAILYSIVSWALSTLLLKKN 122 >gb|AAT42398.1| putative membrane protein [Collimonas fungivorans Ter331] Length = 114 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/114 (76%), Positives = 104/114 (91%) Query: 1 VRLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV 60 +RLL+TWLIN LALLAVPYLMHSVQ SFG+AL+AAL+LGFVNT++RP+L++LTLP T++ Sbjct: 1 MRLLITWLINTLALLAVPYLMHSVQFASFGAALIAALVLGFVNTLIRPILLLLTLPATLL 60 Query: 61 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLLLKSG 114 TLGLFI +INGLMFW+V+ LV GF+VA FWSAVGGA+LYSIVSWALSTLLLK Sbjct: 61 TLGLFIFIINGLMFWLVSHLVSGFYVASFWSAVGGAILYSIVSWALSTLLLKKN 114 >ref|YP_001354885.1| hypothetical protein mma_3195 [Janthinobacterium sp. Marseille] gb|ABR90472.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 114 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/113 (72%), Positives = 101/113 (89%) Query: 1 VRLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV 60 +R++L W INA AL A+P+LM S++VDS G+A++AALILG VNT++RPVLV+LTLPVT++ Sbjct: 1 MRIILIWAINAAALFALPFLMSSIKVDSVGTAIIAALILGLVNTLIRPVLVLLTLPVTLL 60 Query: 61 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLLLKS 113 TLGLFI VINGLMFW V+QLVGGFHVAGFWSAVGGA+LYSI+SW LS LLL+ Sbjct: 61 TLGLFIFVINGLMFWAVSQLVGGFHVAGFWSAVGGAILYSIISWILSALLLQE 113 >ref|ZP_02887172.1| membrane protein of unknown function [Burkholderia graminis C4D1M] gb|EDT07218.1| membrane protein of unknown function [Burkholderia graminis C4D1M] Length = 117 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/107 (64%), Positives = 90/107 (84%) Query: 4 LLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVVTLG 63 LLTWLINALALL + YL+ S+ + SFG+AL+ A++LG +NT++RPVL++LTLPVT+VTLG Sbjct: 4 LLTWLINALALLIITYLVPSIHIRSFGTALIVAVVLGLINTVLRPVLILLTLPVTIVTLG 63 Query: 64 LFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLL 110 LFILV+N L FW+ A L+ GF V+GFWSA G++LYSIVSW LS L+ Sbjct: 64 LFILVVNALCFWLCASLLKGFEVSGFWSAFFGSILYSIVSWLLSALI 110 >ref|YP_003908554.1| membrane protein [Burkholderia sp. CCGE1003] ref|YP_004229833.1| hypothetical protein BC1001_3359 [Burkholderia sp. CCGE1001] gb|ADN59263.1| membrane protein of unknown function [Burkholderia sp. CCGE1003] gb|ADX56773.1| membrane protein of unknown function [Burkholderia sp. CCGE1001] Length = 117 Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 69/107 (64%), Positives = 90/107 (84%) Query: 4 LLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVVTLG 63 LLTWLINALALL + YL+ S+ + SFG+AL+ A++LG +NTI+RPVL++LTLPVT++TLG Sbjct: 4 LLTWLINALALLIITYLVPSIHIRSFGTALIVAVVLGLINTILRPVLILLTLPVTILTLG 63 Query: 64 LFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLL 110 LFILV+N L FW+ A L+ GF V+GFWSA G++LYSIVSW LS L+ Sbjct: 64 LFILVVNALCFWLCASLLKGFEVSGFWSAFFGSILYSIVSWLLSALI 110 >ref|YP_001897369.1| hypothetical protein Bphyt_3757 [Burkholderia phytofirmans PsJN] gb|ACD18145.1| membrane protein of unknown function [Burkholderia phytofirmans PsJN] Length = 117 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 69/108 (63%), Positives = 91/108 (84%) Query: 3 LLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVVTL 62 LLLTWLINALALL + YL+ S+ + SFG+AL+ A++LG +NT++RPVL++LTLPVT++TL Sbjct: 3 LLLTWLINALALLIITYLVPSIHIRSFGTALIVAVVLGLINTVLRPVLILLTLPVTILTL 62 Query: 63 GLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLL 110 GLFILV+N L FW+ A L+ GF V+GFWSA G++LYSIVSW LS L+ Sbjct: 63 GLFILVVNALCFWLCASLLKGFEVSGFWSAFIGSILYSIVSWLLSALI 110 >ref|YP_003606531.1| membrane protein of unknown function [Burkholderia sp. CCGE1002] gb|ADG17020.1| membrane protein of unknown function [Burkholderia sp. CCGE1002] Length = 117 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/107 (63%), Positives = 90/107 (84%) Query: 4 LLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVVTLG 63 LLTWLINALALL + Y++ S+ + SFG+AL+ A++LG +NTI+RPVL++LTLPVT++TLG Sbjct: 4 LLTWLINALALLIITYIVPSIHIRSFGTALIVAIVLGLINTILRPVLILLTLPVTILTLG 63 Query: 64 LFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLL 110 LFILV+N L FW+ A L+ GF V+GFWSA G++LYSIVSW LS L+ Sbjct: 64 LFILVVNALCFWLCASLLKGFEVSGFWSAFFGSILYSIVSWLLSALI 110 >ref|ZP_03575412.1| putative membrane protein [Burkholderia multivorans CGD2M] ref|ZP_03581978.1| putative membrane protein [Burkholderia multivorans CGD2] ref|ZP_03587178.1| putative membrane protein [Burkholderia multivorans CGD1] gb|EED98335.1| putative membrane protein [Burkholderia multivorans CGD1] gb|EEE03555.1| putative membrane protein [Burkholderia multivorans CGD2] gb|EEE10207.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 117 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/110 (61%), Positives = 91/110 (82%) Query: 1 VRLLLTWLINALALLAVPYLMHSVQVDSFGSALLAALILGFVNTIVRPVLVVLTLPVTVV 60 + L+LTW+INALALL + YL+ S+ + SFG+AL+ A++LG +NT++RPVL++LTLPVTVV Sbjct: 1 MSLILTWVINALALLIITYLVPSIHIKSFGTALIVAVVLGLINTVIRPVLILLTLPVTVV 60 Query: 61 TLGLFILVINGLMFWVVAQLVGGFHVAGFWSAVGGALLYSIVSWALSTLL 110 TLGLFILV+N L FW + L+ GF V+GFWSA G++LYSIVSW LS L+ Sbjct: 61 TLGLFILVVNALCFWFASSLLKGFEVSGFWSAFFGSILYSIVSWLLSALI 110