BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0304.p (179 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777663.1| 5-formyltetrahydrofolate cyclo-ligase [Herba... 360 6e-98 ref|YP_004754670.1| 5-formyltetrahydrofolate cyclo-ligase [Colli... 181 4e-44 gb|AAT42396.1| 5-formyltetrahydrofolate cyclo-ligase [Collimonas... 181 4e-44 ref|YP_001101180.1| 5-formyltetrahydrofolate cyclo-ligase [Hermi... 179 2e-43 ref|YP_001354883.1| 5-formyltetrahydrofolate cyclo-ligase [Janth... 178 3e-43 ref|ZP_08273861.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalob... 153 9e-36 ref|ZP_04577754.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalob... 151 3e-35 ref|ZP_04579911.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalob... 139 2e-31 ref|YP_001768246.1| 5-formyltetrahydrofolate cyclo-ligase [Methy... 137 7e-31 ref|YP_001638259.1| 5-formyltetrahydrofolate cyclo-ligase [Methy... 129 2e-28 >ref|YP_003777663.1| 5-formyltetrahydrofolate cyclo-ligase [Herbaspirillum seropedicae SmR1] gb|ADJ65755.1| 5-formyltetrahydrofolate cyclo-ligase protein [Herbaspirillum seropedicae SmR1] Length = 210 Score = 360 bits (923), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 VLHKQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAA 60 VLHKQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAA Sbjct: 32 VLHKQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAA 91 Query: 61 AYNALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLIP 120 AYNALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLIP Sbjct: 92 AYNALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLIP 151 Query: 121 CVGFNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTDAD 179 CVGFNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTDAD Sbjct: 152 CVGFNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTDAD 210 >ref|YP_004754670.1| 5-formyltetrahydrofolate cyclo-ligase [Collimonas fungivorans Ter331] gb|AEK63847.1| 5-formyltetrahydrofolate cyclo-ligase [Collimonas fungivorans Ter331] Length = 226 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/179 (53%), Positives = 119/179 (66%), Gaps = 5/179 (2%) Query: 4 KQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVS----SLAVYQPIRGEPDLA 59 K QLR ALLA R+A+D R DA +G+RV+ W G++ +L VY PIRGEPDL Sbjct: 46 KAQLRRALLATRQAIDPAHRRNWDAELGKRVIAWASGWGLAYPDGTLGVYWPIRGEPDLQ 105 Query: 60 AAYNALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLI 119 AY L ARG+ L LPVV++ D+PL F W PG+A+ KD G P S + PQALLI Sbjct: 106 PAYAELTARGMRLALPVVIDVDSPLRFVGWSPGEAMVKDGFGVAIP-ASYVTVIPQALLI 164 Query: 120 PCVGFNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTDA 178 PCVGFN RLGYGGGFYDRTLA L RP+ VG+ Y LA F+ AHD+ ++A++T+A Sbjct: 165 PCVGFNRNKIRLGYGGGFYDRTLAPLARPQTVGIAYSCALAEFDGAAHDIALDAVITEA 223 >gb|AAT42396.1| 5-formyltetrahydrofolate cyclo-ligase [Collimonas fungivorans Ter331] Length = 198 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/179 (53%), Positives = 119/179 (66%), Gaps = 5/179 (2%) Query: 4 KQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVS----SLAVYQPIRGEPDLA 59 K QLR ALLA R+A+D R DA +G+RV+ W G++ +L VY PIRGEPDL Sbjct: 18 KAQLRRALLATRQAIDPAHRRNWDAELGKRVIAWASGWGLAYPDGTLGVYWPIRGEPDLQ 77 Query: 60 AAYNALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLI 119 AY L ARG+ L LPVV++ D+PL F W PG+A+ KD G P S + PQALLI Sbjct: 78 PAYAELTARGMRLALPVVIDVDSPLRFVGWSPGEAMVKDGFGVAIPA-SYVTVIPQALLI 136 Query: 120 PCVGFNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTDA 178 PCVGFN RLGYGGGFYDRTLA L RP+ VG+ Y LA F+ AHD+ ++A++T+A Sbjct: 137 PCVGFNRNKIRLGYGGGFYDRTLAPLARPQTVGIAYSCALAEFDGAAHDIALDAVITEA 195 >ref|YP_001101180.1| 5-formyltetrahydrofolate cyclo-ligase [Herminiimonas arsenicoxydans] emb|CAL63059.1| Putative 5-formyltetrahydrofolate cyclo-ligase [Herminiimonas arsenicoxydans] Length = 186 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 84/174 (48%), Positives = 113/174 (64%) Query: 3 HKQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAAAY 62 +K +LR LLA R A+ ++R+L D ++ ++++ W + ++ VY P+RGEPDL AAY Sbjct: 3 NKTELRKTLLASRNAITDEQRQLWDKQLVEKIMAWWTIKRLHTIGVYWPMRGEPDLNAAY 62 Query: 63 NALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLIPCV 122 LA GV L LPVVV +APL F AW PGD + KD G P E++PQAL+IPCV Sbjct: 63 ATLAELGVQLALPVVVRDNAPLKFCAWTPGDPVIKDRYGAAVPADQHTELQPQALIIPCV 122 Query: 123 GFNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILT 176 GFN FRLGYGGGFYDRTLA +PRP +GV Y F A +D+ ++ ++T Sbjct: 123 GFNTQRFRLGYGGGFYDRTLASVPRPHTIGVAYAHAETVFSADPYDIALDMVMT 176 >ref|YP_001354883.1| 5-formyltetrahydrofolate cyclo-ligase [Janthinobacterium sp. Marseille] gb|ABR90258.1| 5-formyltetrahydrofolate cyclo-ligase [Janthinobacterium sp. Marseille] Length = 227 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 90/175 (51%), Positives = 117/175 (66%) Query: 3 HKQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAAAY 62 +K +LR LL RKAL +R + D R+ ++L+W +SL VY +RGEPD+ AY Sbjct: 46 NKLELRRTLLTSRKALAADQRAIFDRRLSDKILQWWRAEKPASLGVYWAMRGEPDVHQAY 105 Query: 63 NALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLIPCV 122 LAA GV L LP++V +APL F +W PG+AL+KD GT P I+PQALLIPC+ Sbjct: 106 AELAAAGVQLALPLIVGDNAPLQFVSWTPGEALRKDRFGTDIPAADNALIQPQALLIPCL 165 Query: 123 GFNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTD 177 GFNA FRLGYGGGFYDRTLA PRPR +GV Y G F A+ +DV ++A++T+ Sbjct: 166 GFNADCFRLGYGGGFYDRTLAQEPRPRTLGVAYALGEVDFSAEVYDVALDAVVTE 220 >ref|ZP_08273861.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32665.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalobacteraceae bacterium IMCC9480] Length = 174 Score = 153 bits (387), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 82/169 (48%), Positives = 107/169 (63%), Gaps = 4/169 (2%) Query: 11 LLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAAAYNALAARGV 70 +L RKAL R+ A A IG+ +L+W + ++LAVY PIRGEPDLA AY L RGV Sbjct: 1 MLGLRKALTGAARDAACASIGRYLLDWQAGSAATTLAVYWPIRGEPDLAGAYRQLVMRGV 60 Query: 71 HLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPE--IRPQALLIPCVGFNAAG 128 L LP+V APL F AW PG + D G P+P+AP+ + P A+LIPCVG +A Sbjct: 61 QLALPIVSGAAAPLTFAAWTPGQPMTPDTFGV--PVPAAPQRLLVPDAILIPCVGISAQR 118 Query: 129 FRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTD 177 FRLGYGGG YDRTLA LP A+G+ + F A HD+ ++A++T+ Sbjct: 119 FRLGYGGGMYDRTLALLPSVPAIGIAFDCARTEFAAAPHDIRLQALITE 167 >ref|ZP_04577754.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalobacter formigenes HOxBLS] gb|EEO28716.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalobacter formigenes HOxBLS] Length = 198 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 76/175 (43%), Positives = 99/175 (56%), Gaps = 1/175 (0%) Query: 4 KQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAAAYN 63 K+ LR LL RK + ER D IG +V + +++ VY PIR EPDL+ Y Sbjct: 21 KKNLRQTLLETRKKIRPLERSRFDREIGNQVSLYLASRHFTTIGVYLPIRNEPDLSTLYA 80 Query: 64 ALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLIPCVG 123 L+ R + L LPV + KD PL F W+PGD L K A P P P+ LLIPCVG Sbjct: 81 ELSGR-MQLSLPVTLAKDQPLQFVRWKPGDTLIKGAYNVSIPEKQEPVSMPEILLIPCVG 139 Query: 124 FNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTDA 178 F ++ FRLGYGGGF+DRTL P VG+ Y L FE + +D+P+ I+T+ Sbjct: 140 FTSSRFRLGYGGGFFDRTLEKYPDTHTVGIAYSRLLTTFETEENDIPLHCIITET 194 >ref|ZP_04579911.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalobacter formigenes OXCC13] gb|EEO30884.1| 5-formyltetrahydrofolate cyclo-ligase [Oxalobacter formigenes OXCC13] Length = 198 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 4 KQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSLAVYQPIRGEPDLAAAYN 63 K+ LR +LL R + ER+ D +I Q+V ++ SSL VY PIR EP+L Y Sbjct: 21 KRTLRRSLLKLRSEIKPDERKHFDRKISQQVSKYLESFAFSSLGVYLPIRNEPELDVLYA 80 Query: 64 ALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPEIRPQALLIPCVG 123 L+ + + L LP+ K+ PL F +W PGD L G P P P A+LIPCVG Sbjct: 81 GLSTK-MALSLPITSGKEQPLQFFSWSPGDELVVGDYGIAVPKVLKPVPMPVAMLIPCVG 139 Query: 124 FNAAGFRLGYGGGFYDRTLAGLPRPRAVGVCYRFGLAAFEAQAHDVPMEAILTD 177 F FRLGYGGGF+DRTLA P +GV Y F+A+ +D+P++ ++T+ Sbjct: 140 FTEKRFRLGYGGGFFDRTLALYPETHKIGVAYSCLATTFDAEENDIPLDCVITE 193 >ref|YP_001768246.1| 5-formyltetrahydrofolate cyclo-ligase [Methylobacterium sp. 4-46] gb|ACA15812.1| 5-formyltetrahydrofolate cyclo-ligase [Methylobacterium sp. 4-46] Length = 252 Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/178 (46%), Positives = 105/178 (58%), Gaps = 7/178 (3%) Query: 4 KQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSL-AVYQPIRGEPDLAAAY 62 +++ R AL+ARR + QERE ARIG R LE + L Y P RGE D Sbjct: 67 RKETRAALIARRMQISAQEREAWSARIG-RGLEAALAGAPGGLIGFYWPFRGEFDARPVL 125 Query: 63 NALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPE-IRPQALLIPC 121 AL RG L LPVVVEK PL FR W+PG A+ + P+P+ E + P L+ P Sbjct: 126 TALRERGTRLALPVVVEKAQPLQFREWRPGIAMTRGVWDI--PIPAEGEAVHPDVLIAPL 183 Query: 122 VGFNAAGFRLGYGGGFYDRTLAGLP-RPRAVGVCYRFG-LAAFEAQAHDVPMEAILTD 177 VG++ AG+RLGYGGGFYDRT+A +P RPR +GV + L Q HDVPM+ I+T+ Sbjct: 184 VGYDPAGYRLGYGGGFYDRTIAAMPVRPRVIGVGFALARLDTIHPQPHDVPMDVIVTE 241 >ref|YP_001638259.1| 5-formyltetrahydrofolate cyclo-ligase [Methylobacterium extorquens PA1] gb|ABY29188.1| 5-formyltetrahydrofolate cyclo-ligase [Methylobacterium extorquens PA1] Length = 206 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 7/178 (3%) Query: 4 KQQLRTALLARRKALDVQERELADARIGQRVLEWTMRAGVSSL-AVYQPIRGEPDLAAAY 62 ++++R L+A+R A+ ++R IG R L + SSL Y P RGE D Sbjct: 31 RRKIREKLIAQRVAISAEDRSAWSETIG-RALTAALEPYASSLIGFYWPFRGEYDPRGVL 89 Query: 63 NALAARGVHLCLPVVVEKDAPLLFRAWQPGDALQKDALGTLAPLPSAPE-IRPQALLIPC 121 A+ RG L LPV+VE+ PL+FR W PG + + P+P + E + P L++P Sbjct: 90 TAMRERGSRLALPVIVERGQPLVFRLWSPGSLMVQGIWKI--PMPESGEAVFPDLLVVPL 147 Query: 122 VGFNAAGFRLGYGGGFYDRTLAGLP-RPRAVGVCYRFG-LAAFEAQAHDVPMEAILTD 177 VGF+ G+RLGYGGGFYDRT+A +P RPR VGV + G L Q HD+P+E I+T+ Sbjct: 148 VGFDGQGYRLGYGGGFYDRTIAAMPVRPRTVGVGFELGRLETICPQPHDIPLEQIITE 205