BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0270.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777632.1| transcription regulator protein [Herbaspiril... 443 e-122 ref|NP_520238.1| transcription regulator protein [Ralstonia sola... 303 9e-81 emb|CCA84484.1| putative transcriptional regulator, GntR family ... 303 1e-80 emb|CCA81948.1| putative transcriptional regulator, GntR family ... 303 1e-80 emb|CAQ35991.1| hypothetical protein RSMK01190 [Ralstonia solana... 302 2e-80 ref|YP_003745195.1| gntr family transcriptional regulator [Ralst... 302 2e-80 ref|YP_002005024.1| GntR family transcriptional regulator [Cupri... 302 2e-80 gb|AEG68620.1| conserved hypothetical protein [Ralstonia solanac... 302 2e-80 ref|YP_583039.1| GntR family transcriptional regulator [Cupriavi... 302 2e-80 ref|YP_004684789.1| GntR family transcriptional regulator [Cupri... 302 2e-80 >ref|YP_003777632.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65724.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 245 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA Sbjct: 31 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 90 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQIAGLRRMVEEERDCYLNGDRPRWIRLS 120 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQIAGLRRMVEEERDCYLNGDRPRWIRLS Sbjct: 91 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQIAGLRRMVEEERDCYLNGDRPRWIRLS 150 Query: 121 AQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDIK 180 AQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDIK Sbjct: 151 AQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDIK 210 Query: 181 AAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKGL 215 AAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKGL Sbjct: 211 AAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKGL 245 >ref|NP_520238.1| transcription regulator protein [Ralstonia solanacearum GMI1000] emb|CAD15824.1| probable transcription regulator protein [Ralstonia solanacearum GMI1000] Length = 250 Score = 303 bits (777), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 172/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV +RLAA+G+VDLE NRGAFIA Sbjct: 32 MYHEIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSRLAADGLVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + +A L V EER +++ DRPRWIRL Sbjct: 92 APSIDEAHAMFELRQILERAVLDKVGRSASPKAAVAPLLARVNEERQAFVSHDRPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD+ Sbjct: 152 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDV 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLRAVLG+G Sbjct: 212 GAAQAHMAQHLQCCADRVRPEAPADFDLRAVLGRG 246 >emb|CCA84484.1| putative transcriptional regulator, GntR family [Ralstonia syzygii R24] Length = 250 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 173/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV A+LAA+G+VDLE NRGAFIA Sbjct: 32 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFAQLAADGLVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A IA L +V+EER +++ DRPRWIRL Sbjct: 92 APSIDEAHAMFELRQILERAVLDKVGRSANPNTAIAPLMELVKEERQAFVSHDRPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 152 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 212 SAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 246 >emb|CCA81948.1| putative transcriptional regulator, GntR family [blood disease bacterium R229] Length = 250 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 173/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV A+LAA+G+VDLE NRGAFIA Sbjct: 32 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFAQLAADGLVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A IA L +V+EER +++ DRPRWIRL Sbjct: 92 APSIDEAHAMFELRQILERAVLDKVGRSANPNTAIAPLLELVKEERQAFVSHDRPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 152 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 212 SAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 246 >emb|CAQ35991.1| hypothetical protein RSMK01190 [Ralstonia solanacearum MolK2] Length = 252 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV ++LAA+G+VDLE NRGAFIA Sbjct: 32 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSQLAADGLVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + IA L+ +V+EER ++ DRPRWIRL Sbjct: 92 APSIDEAHAMFELRQILERAVLDKVGRSADPKTAIAPLQELVKEERQAFVGHDRPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 152 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 212 GAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 246 >ref|YP_003745195.1| gntr family transcriptional regulator [Ralstonia solanacearum CFBP2957] emb|CBJ42574.1| putative transcriptional regulator, GntR family [Ralstonia solanacearum CFBP2957] Length = 252 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV ++LAA+G+VDLE NRGAFIA Sbjct: 34 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSQLAADGLVDLEPNRGAFIA 93 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + IA L+ +V+EER ++ DRPRWIRL Sbjct: 94 APSIDEAHAMFELRQILERAVLDKVGRSADPKTAIAPLQELVKEERQAFVGHDRPRWIRL 153 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 154 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 213 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 214 GAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 248 >ref|YP_002005024.1| GntR family transcriptional regulator [Cupriavidus taiwanensis LMG 19424] emb|CAQ68957.1| putative TRANSCRIPTIONal REGULATOR, GntR family [Cupriavidus taiwanensis LMG 19424] Length = 255 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 172/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE +LC+IY TARHTVRKVL+ LAA+GMVDLE NRGAFIA Sbjct: 40 MYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSHLAADGMVDLEPNRGAFIA 99 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 SPS E DMFELR +LE AVLEKL + IA LR+MV +ER +L DRP+WIRL Sbjct: 100 SPSTDEAHDMFELRQMLERAVLEKLAAMPDVKAVIAPLRQMVADERQAFLTHDRPKWIRL 159 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH ALAEL+GNALLV +R+LVSRTTLMIA EAPG+NACSFDEHE +L+ALE+G+ Sbjct: 160 SAEFHTALAELSGNALLVNMMRRLVSRTTLMIASVEAPGNNACSFDEHEDILDALEQGNA 219 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AQ+ MAHHL C DRV+PD FDLR+VLG+ Sbjct: 220 ALAQSRMAHHLGACADRVQPDEPGSFDLRSVLGRS 254 >gb|AEG68620.1| conserved hypothetical protein [Ralstonia solanacearum Po82] Length = 272 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV ++LAA+G+VDLE NRGAFIA Sbjct: 52 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSQLAADGLVDLEPNRGAFIA 111 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + IA L+ +V+EER ++ DRPRWIRL Sbjct: 112 APSIDEAHAMFELRQILERAVLDKVGRSADPKTAIAPLQELVKEERQAFVGHDRPRWIRL 171 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 172 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 231 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 232 GAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 266 >ref|YP_583039.1| GntR family transcriptional regulator [Cupriavidus metallidurans CH34] gb|ABF07770.1| transcriptional regulator, GntR-family [Cupriavidus metallidurans CH34] Length = 247 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/215 (68%), Positives = 171/215 (79%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE +LC+IY TARHTVRKVL+RLAA+GMVDLE NRGAFIA Sbjct: 32 MYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSRLAADGMVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 SPS E DMFELR +LE AVL+KL R IA LR+MV +ER +L +RPRWIRL Sbjct: 92 SPSTDEAHDMFELRQMLERAVLDKLASLPNVRTVIAPLRKMVNDERQAFLTHERPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH ALAEL+GN LLV +R+LVSRTTLMIA E+PGHNACSFDEH+ +L+ALE+GD Sbjct: 152 SAEFHTALAELSGNQLLVTMMRRLVSRTTLMIASVESPGHNACSFDEHDEILDALEQGDA 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AQ MAHHL C +RV+PD FDLR+VLG+ Sbjct: 212 ALAQTRMAHHLGACAERVQPDEPGNFDLRSVLGRS 246 >ref|YP_004684789.1| GntR family transcriptional regulator [Cupriavidus necator N-1] gb|AEI76308.1| transcriptional regulator GntR family [Cupriavidus necator N-1] Length = 256 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 171/215 (79%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE +LC+IY TARHTVRKVL+ LAA+GMVDLE NRGAFIA Sbjct: 41 MYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSHLAADGMVDLEPNRGAFIA 100 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 SPS E DMFELR +LE AVLEKL + IA LR+MV ER +L DRP+WIRL Sbjct: 101 SPSTDEAHDMFELRQMLERAVLEKLAGMPDVKTVIAPLRQMVASERQAFLTHDRPKWIRL 160 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH ALAEL+GNALLV +R+LVSRTTLMIA EAPG+NACSFDEHE +L+ALE+G+ Sbjct: 161 SAEFHTALAELSGNALLVNMMRRLVSRTTLMIASVEAPGNNACSFDEHEEILDALEQGNA 220 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AQ+ MAHHL C DRV+PD FDLR+VLG+ Sbjct: 221 ALAQSRMAHHLGACADRVQPDEPGNFDLRSVLGRS 255