BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0259.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777626.1| GntR family transcription regulator protein ... 497 e-139 ref|YP_001351727.1| GntR family transcriptional regulator [Janth... 332 4e-89 ref|YP_004752058.1| GntR family transcriptional regulator [Colli... 288 6e-76 ref|YP_550278.1| GntR family transcriptional regulator [Polaromo... 285 4e-75 emb|CBA32229.1| hypothetical protein Csp_D31090 [Curvibacter put... 277 1e-72 ref|YP_004156514.1| GntR family transcriptional regulator [Vario... 274 7e-72 ref|YP_002945549.1| GntR family transcriptional regulator [Vario... 260 2e-67 ref|YP_548266.1| GntR family transcriptional regulator [Polaromo... 232 4e-59 ref|ZP_03545739.1| transcriptional regulator, GntR family [Comam... 231 8e-59 ref|YP_003276169.1| GntR family transcriptional regulator [Comam... 231 8e-59 >ref|YP_003777626.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65718.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 249/249 (100%), Positives = 249/249 (100%) Query: 1 MSTNPSLKSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGI 60 MSTNPSLKSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGI Sbjct: 1 MSTNPSLKSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGI 60 Query: 61 VTVSARRGWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAA 120 VTVSARRGWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAA Sbjct: 61 VTVSARRGWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAA 120 Query: 121 IAGADVGARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEH 180 IAGADVGARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEH Sbjct: 121 IAGADVGARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEH 180 Query: 181 VLIVEALERGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEPLRQALASVSRQGAASDAKT 240 VLIVEALERGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEPLRQALASVSRQGAASDAKT Sbjct: 181 VLIVEALERGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEPLRQALASVSRQGAASDAKT 240 Query: 241 VRPPGKGPL 249 VRPPGKGPL Sbjct: 241 VRPPGKGPL 249 >ref|YP_001351727.1| GntR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR91180.1| transcriptional regulator, GntR family [Janthinobacterium sp. Marseille] Length = 284 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 175/240 (72%), Positives = 197/240 (82%), Gaps = 5/240 (2%) Query: 1 MSTNPSLKSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGI 60 M++ +LKSS QIA RITE+ILAKQLAPGTRLGEQQLADLF VSRT +REAL L RGI Sbjct: 1 MTSEQTLKSSIQIAARITESILAKQLAPGTRLGEQQLADLFGVSRTLIREALMRLATRGI 60 Query: 61 VTVSARRGWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAA 120 V VSARRGWFVIEPT ++AREAFEARRVIELGLLR AR P+ AIGQLREHIARE+AA Sbjct: 61 VMVSARRGWFVIEPTASEAREAFEARRVIELGLLRHAR--PLSKHAIGQLREHIAREQAA 118 Query: 121 IAGADVGARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEH 180 IAG DVGARSYLLGDFHVCL ECLGN+LL++TLRDLTARTTLTAML QSS QA DSC +H Sbjct: 119 IAGDDVGARSYLLGDFHVCLCECLGNNLLSDTLRDLTARTTLTAMLRQSSSQAVDSCEDH 178 Query: 181 VLIVEALERGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEPLRQALASVSRQGAASDAKT 240 V IV ALE GD+++AE+LM +HLQ VES L ++ SDPL LR AL V+ AA +KT Sbjct: 179 VHIVAALESGDIDEAERLMLEHLQVVESTLYELAPSDPLNALRTALTPVA---AAKVSKT 235 >ref|YP_004752058.1| GntR family transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK61235.1| Transcriptional regulator, GntR family [Collimonas fungivorans Ter331] Length = 240 Score = 288 bits (736), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 160/223 (71%), Positives = 186/223 (83%), Gaps = 2/223 (0%) Query: 8 KSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVTVSARR 67 KSS+QIA RITEA+LA++LAPGTRLGEQQLA+LF VSRTQ+REALT L+ RGIVTVSARR Sbjct: 6 KSSTQIAERITEAMLARKLAPGTRLGEQQLAELFGVSRTQIREALTRLVTRGIVTVSARR 65 Query: 68 GWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAAIAGADVG 127 GW+VIEPTP AR+AFEARRV+ELGLLR AR P+G AI +LR+H+ RE+AA+ G DV Sbjct: 66 GWYVIEPTPEDARDAFEARRVLELGLLRHAR--PIGADAIRKLRQHVEREQAALEGEDVA 123 Query: 128 ARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEAL 187 RS+LLGDFHVCL E GN+LLA+TLRDLT RTTLTAM +QSS A SC+EHV IV AL Sbjct: 124 TRSFLLGDFHVCLCESFGNTLLADTLRDLTTRTTLTAMQYQSSHHARQSCAEHVGIVAAL 183 Query: 188 ERGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEPLRQALASVS 230 E GDLE AEQLMH+HL +VE+GL+Q SD L PLRQALA +S Sbjct: 184 EAGDLELAEQLMHNHLCNVEAGLDQSLRSDSLSPLRQALAPLS 226 >ref|YP_550278.1| GntR family transcriptional regulator [Polaromonas sp. JS666] gb|ABE45380.1| transcriptional regulator, GntR family [Polaromonas sp. JS666] Length = 259 Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 153/250 (61%), Positives = 184/250 (73%), Gaps = 10/250 (4%) Query: 7 LKSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVTVSAR 66 + ++S I+ RI EA++A++LAPG RLGEQQLA LF SRT VREALTHL ARGIVTVSAR Sbjct: 1 MTTASHISNRIIEAVMAQKLAPGARLGEQQLAILFDCSRTIVREALTHLAARGIVTVSAR 60 Query: 67 RGWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAAIAGADV 126 RGW++IEP+ +AREAFEARRVIE+GL+R R V +AI QL+ H+ RE+AA+ G D+ Sbjct: 61 RGWYLIEPSREEAREAFEARRVIEMGLIRCTR--DVSKSAIKQLKSHLTREKAAVKGEDI 118 Query: 127 GARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEA 186 G RS+LLGDFHVCLAECLGN+LLA+TLRD TARTTL AML+QSS A SC EHV IV+A Sbjct: 119 GLRSFLLGDFHVCLAECLGNNLLADTLRDFTARTTLIAMLYQSSHDAAQSCEEHVRIVQA 178 Query: 187 LERGDLEQAEQLMHDHLQHVESGLN-QVRSSDPLEPLRQALASVSRQGA-------ASDA 238 LE+GDL AEQLM H+ V++GL Q DPL LR AL+ +S A S Sbjct: 179 LEKGDLVLAEQLMQAHIGSVQAGLQLQAAGGDPLAHLRSALSPLSPAKARSAQELHTSVR 238 Query: 239 KTVRPPGKGP 248 KT R P K P Sbjct: 239 KTGRRPAKPP 248 >emb|CBA32229.1| hypothetical protein Csp_D31090 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 297 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 150/241 (62%), Positives = 178/241 (73%), Gaps = 6/241 (2%) Query: 3 TNPSLKSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVT 62 T ++ ++S I+ RI EAI+A++LAPG RLGEQQLA +F SRT VREALT L ARGIVT Sbjct: 37 TGCTMANASDISSRIIEAIMAQKLAPGARLGEQQLAMVFDCSRTIVREALTRLAARGIVT 96 Query: 63 VSARRGWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAAIA 122 VS+RRGW+VIEP+ ++AREAFEARRVIE+GL+R V AI L+ HI E+AA+ Sbjct: 97 VSSRRGWYVIEPSLSEAREAFEARRVIEMGLIRCTT--EVSKAAIKTLKAHIKTEQAAVK 154 Query: 123 GADVGARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVL 182 G DVG RSYLLGDFHVCLAECLGNSLLA+TLRD TARTTL AML+QSS A SC+EH Sbjct: 155 GTDVGLRSYLLGDFHVCLAECLGNSLLADTLRDFTARTTLIAMLYQSSHDAAHSCAEHGR 214 Query: 183 IVEALERGDLEQAEQLMHDHLQHVESGLN-QVRSSDPLEPLRQALASVSRQGAASDAKTV 241 IVEALE+ D AEQLM H+ HV+ L Q + DPL LR AL+ VS +S AK V Sbjct: 215 IVEALEKSDWVLAEQLMQQHIGHVQDALRLQPAAEDPLAELRNALSPVSE---SSKAKPV 271 Query: 242 R 242 R Sbjct: 272 R 272 >ref|YP_004156514.1| GntR family transcriptional regulator [Variovorax paradoxus EPS] gb|ADU38403.1| transcriptional regulator, GntR family [Variovorax paradoxus EPS] Length = 255 Score = 274 bits (701), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 148/237 (62%), Positives = 176/237 (74%), Gaps = 3/237 (1%) Query: 9 SSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVTVSARRG 68 S+S+I+ RI EA++A++LAPG+RLGEQQLA LF SRT VREALT L ARGIVTVSARRG Sbjct: 4 SASEISARIVEAVMAQKLAPGSRLGEQQLAMLFDCSRTIVREALTRLAARGIVTVSARRG 63 Query: 69 WFVIEPTPAQAREAFEARRVIELGLLRQARLR-PVGDTAIGQLREHIAREEAAIAGADVG 127 WFVIEP+ +AREAFEARRVIELGL+R A + TA+ QL+ H+ RE+AA+ +DVG Sbjct: 64 WFVIEPSQEEAREAFEARRVIELGLIRSAGTTGKLDKTALRQLKAHLQREKAALKESDVG 123 Query: 128 ARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEAL 187 RS+LLGDFHVCLAECLGN+LLA+TLRD TARTTL AML+QS+ A SC +HV IV AL Sbjct: 124 NRSFLLGDFHVCLAECLGNTLLADTLRDFTARTTLIAMLYQSTHDAVQSCEDHVQIVAAL 183 Query: 188 ERGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEPLRQALASVSRQGAASDAKTVRPP 244 ERGD AE LM H+ V+S L +DPL LR ALA + Q AS R P Sbjct: 184 ERGDHAAAEALMATHIGTVQSALRVQAPTDPLAQLRDALAPL--QNTASTKPKRRKP 238 >ref|YP_002945549.1| GntR family transcriptional regulator [Variovorax paradoxus S110] gb|ACS20283.1| transcriptional regulator, GntR family [Variovorax paradoxus S110] Length = 260 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 142/235 (60%), Positives = 173/235 (73%), Gaps = 1/235 (0%) Query: 9 SSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVTVSARRG 68 S+S+I+ RI EA++A++LAPG+RLGEQ LA LF SRT VREALT L ARGIVTVSARRG Sbjct: 4 SASEISARIVEAVMAQKLAPGSRLGEQPLAMLFDCSRTIVREALTRLAARGIVTVSARRG 63 Query: 69 WFVIEPTPAQAREAFEARRVIELGLLRQ-ARLRPVGDTAIGQLREHIAREEAAIAGADVG 127 WFVIEP+ +AREAFEARRVIELGL+R + A+ QL+ H+ RE+AA+ +DVG Sbjct: 64 WFVIEPSQDEAREAFEARRVIELGLIRSTGSTGKIDKAALRQLKAHLQREKAALKESDVG 123 Query: 128 ARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEAL 187 RS+LLGDFHVCLAECLGN+LLA+TLRD TARTTL AML+QS+ A SC +HV IV AL Sbjct: 124 NRSFLLGDFHVCLAECLGNTLLADTLRDFTARTTLIAMLYQSTHDAVQSCEDHVQIVAAL 183 Query: 188 ERGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEPLRQALASVSRQGAASDAKTVR 242 ERGD AE LM H+ V+S L +DPL LR ALA + ++ + A R Sbjct: 184 ERGDHAAAEALMAAHIGTVQSALRVQAPTDPLAQLRDALAPLQQKNKKTAAAVPR 238 >ref|YP_548266.1| GntR family transcriptional regulator [Polaromonas sp. JS666] gb|ABE43368.1| transcriptional regulator, GntR family [Polaromonas sp. JS666] Length = 231 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 128/229 (55%), Positives = 162/229 (70%), Gaps = 9/229 (3%) Query: 7 LKSSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVTVSAR 66 + S +QI+ ++ E+ILA++LAPG RLGEQ+LA+LF VSRT VREAL L ARG V V R Sbjct: 1 MSSQNQISQQVVESILAQKLAPGERLGEQELAELFGVSRTLVREALMQLQARGFVEVRTR 60 Query: 67 RGWFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAAIAGADV 126 +GW+V+EP+ +AR+AF ARR+IE G+LR+A RP+ + + +LR+HIA+E+ AI AD Sbjct: 61 KGWYVVEPSVEEARDAFSARRIIETGILREAG-RPL-QSVVRKLRQHIAQEQQAIDDADA 118 Query: 127 GARSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEA 186 RS+LL DFHVCLAECLG LL + LRDLTARTTL A L+QS A SC+EH IV A Sbjct: 119 ATRSFLLADFHVCLAECLGQRLLCDVLRDLTARTTLAASLYQSKHDAGQSCAEHAGIVAA 178 Query: 187 LERGDLEQAEQLMHDHLQHVESGLNQVRSSDP----LEPLRQALASVSR 231 LE+G LE A Q M DH+ VE+ L SS P E LR AL+ V R Sbjct: 179 LEKGQLELARQRMLDHIGSVEAALG---SSAPDASSSEKLRAALSPVER 224 >ref|ZP_03545739.1| transcriptional regulator, GntR family [Comamonas testosteroni KF-1] gb|EED70025.1| transcriptional regulator, GntR family [Comamonas testosteroni KF-1] Length = 230 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 128/227 (56%), Positives = 166/227 (73%), Gaps = 6/227 (2%) Query: 9 SSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVTVSARRG 68 S IA R+ EAILA++LAPG RLGEQ+LA+ F VSRT VREAL L ARG V V ARRG Sbjct: 5 SPQHIAERVVEAILAQKLAPGERLGEQELANNFDVSRTVVREALMQLQARGFVQVQARRG 64 Query: 69 WFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAAIAGADVGA 128 W+V++P+ A+A +AF ARR+IE G+L++A +P+ I +LR HIA+E+ AIAGAD Sbjct: 65 WYVVQPSAAEAMDAFSARRIIETGILQEAG-KPL-QRVITRLRRHIAQEQKAIAGADSAT 122 Query: 129 RSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEALE 188 R++LL DFHVCLAE +G+ LLA+TLRDLTARTTL A L+QS+ A SC+EH IV ALE Sbjct: 123 RAFLLADFHVCLAEQMGHRLLADTLRDLTARTTLAATLYQSTHSASQSCAEHERIVAALE 182 Query: 189 RGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEP---LRQALASVSRQ 232 RGD E A+ L+ +H+ VE L ++R+++ EP LR LA V +Q Sbjct: 183 RGDTEGAKALLLEHIGMVERSL-EIRATEAEEPGDRLRATLAPVLKQ 228 >ref|YP_003276169.1| GntR family transcriptional regulator [Comamonas testosteroni CNB-2] gb|ACY30873.1| transcriptional regulator, GntR family [Comamonas testosteroni CNB-2] Length = 230 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 128/227 (56%), Positives = 166/227 (73%), Gaps = 6/227 (2%) Query: 9 SSSQIAVRITEAILAKQLAPGTRLGEQQLADLFKVSRTQVREALTHLMARGIVTVSARRG 68 S IA R+ EAILA++LAPG RLGEQ+LA+ F VSRT VREAL L ARG V V ARRG Sbjct: 5 SPQHIAERVVEAILAQKLAPGERLGEQELANNFDVSRTVVREALMQLQARGFVQVQARRG 64 Query: 69 WFVIEPTPAQAREAFEARRVIELGLLRQARLRPVGDTAIGQLREHIAREEAAIAGADVGA 128 W+V++P+ A+A +AF ARR+IE G+L++A +P+ I +LR HIA+E+ AIAGAD Sbjct: 65 WYVVQPSAAEAMDAFSARRIIETGILQEAG-KPL-QRVITRLRRHIAQEQKAIAGADSAT 122 Query: 129 RSYLLGDFHVCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEALE 188 R++LL DFHVCLAE +G+ LLA+TLRDLTARTTL A L+QS+ A SC+EH IV ALE Sbjct: 123 RAFLLADFHVCLAEQMGHRLLADTLRDLTARTTLAATLYQSTHSASQSCAEHERIVAALE 182 Query: 189 RGDLEQAEQLMHDHLQHVESGLNQVRSSDPLEP---LRQALASVSRQ 232 RGD E A+ L+ +H+ VE L ++R+++ EP LR LA V +Q Sbjct: 183 RGDTEGAKALLLEHIGMVERSL-EIRATETEEPGDRLRATLAPVLKQ 228