BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0257.p (1331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777624.1| TPR repeat containing protein [Herbaspirillu... 2533 0.0 ref|ZP_08273145.1| hypothetical protein IMCC9480_461 [Oxalobacte... 1038 0.0 ref|YP_003751808.1| polysaccharide transport system component si... 547 e-153 ref|YP_003745050.1| polysaccharide transporter component signal ... 546 e-153 ref|ZP_07676406.1| tetratricopeptide TPR_4 [Ralstonia sp. 5_7_47... 541 e-151 gb|AEG68462.1| polysaccharide transport system component protein... 535 e-149 ref|YP_002982030.1| tetratricopeptide repeat-containing protein ... 530 e-148 emb|CCA84623.1| putative polysaccharide transport system compone... 528 e-147 emb|CCA79556.1| putative polysaccharide transport system compone... 496 e-137 ref|YP_586292.1| hypothetical protein Rmet_4156 [Cupriavidus met... 477 e-132 >ref|YP_003777624.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ65716.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] Length = 1349 Score = 2533 bits (6564), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1323/1333 (99%), Positives = 1325/1333 (99%), Gaps = 2/1333 (0%) Query: 1 VFALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFA 60 VFALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFA Sbjct: 17 VFALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFA 76 Query: 61 EARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTY 120 EARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTY Sbjct: 77 EARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTY 136 Query: 121 PLSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSS 180 PLSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSS Sbjct: 137 PLSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSS 196 Query: 181 ASFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTR 240 ASFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTR Sbjct: 197 ASFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTR 256 Query: 241 LAQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFTRSLRLTQA 300 LAQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFTRSLRLT+A Sbjct: 257 LAQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFTRSLRLTRA 316 Query: 301 LLQQPQQPHQLQQRMQMAMRQARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYTLAY 360 LLQQPQQPHQLQQRMQMAMRQARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYTLAY Sbjct: 317 LLQQPQQPHQLQQRMQMAMRQARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYTLAY 376 Query: 361 NVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHWLAYARLTNDE 420 NVFLGNRNLTDARLLAQSAVRQRPDD AWRKRLAEVSEWSGVPEQATPHWLAYARLTNDE Sbjct: 377 NVFLGNRNLTDARLLAQSAVRQRPDDAAWRKRLAEVSEWSGVPEQATPHWLAYARLTNDE 436 Query: 421 GAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAALLEAR 480 AWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAALLEAR Sbjct: 437 AAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAALLEAR 496 Query: 481 LRAN--ANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANALMA 538 LR N A ANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANALMA Sbjct: 497 LRQNRTAAANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANALMA 556 Query: 539 ANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGYDQLLATNQ 598 ANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEAR+GYDQLLATNQ Sbjct: 557 ANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARRGYDQLLATNQ 616 Query: 599 AAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLDS 658 AAEGDMSNLMVVIQEHEPRAAA LAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLDS Sbjct: 617 AAEGDMSNLMVVIQEHEPRAAAELAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLDS 676 Query: 659 ITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILIAT 718 ITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILIAT Sbjct: 677 ITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILIAT 736 Query: 719 RDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFPQNDYLWLLSY 778 RDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFPQNDYLWLLSY Sbjct: 737 RDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFPQNDYLWLLSY 796 Query: 779 AEALDASGQPDLAWRIRRRAWIELRDPARLRNIPPAQLREWRDRLAALAPLFMPADASNK 838 AEALDASGQPDLAWRIRRRAWIELRDPARLRNIPPAQLREWRDRLAALAPLFMPADASNK Sbjct: 797 AEALDASGQPDLAWRIRRRAWIELRDPARLRNIPPAQLREWRDRLAALAPLFMPADASNK 856 Query: 839 VMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARSDARQHAQDQDVSARLMDGPAAL 898 VMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARSDARQHAQDQDVSARLMDGPAAL Sbjct: 857 VMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARSDARQHAQDQDVSARLMDGPAAL 916 Query: 899 FAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLARTWLATRFATQLDKPLWGELAM 958 FAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLARTWLATRFATQLDKPLWGELAM Sbjct: 917 FAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLARTWLATRFATQLDKPLWGELAM 976 Query: 959 ALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPLAQTLAFDQLQRLPGDDELHARL 1018 ALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPLAQTLAFDQLQRLPGDDELHARL Sbjct: 977 ALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPLAQTLAFDQLQRLPGDDELHARL 1036 Query: 1019 TGLVTDDPAKFSVGYTATREFPLATKLFTLSSGVNLTPGTRLDFGYIERRQSVDDSTLLG 1078 TGLVTDDPAKFS GYTATREFPLATKLFTLSSGVNLTPGTRLDFGYIERRQSVDDSTLLG Sbjct: 1037 TGLVTDDPAKFSAGYTATREFPLATKLFTLSSGVNLTPGTRLDFGYIERRQSVDDSTLLG 1096 Query: 1079 DVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNGLRLEFSRQLTPKLTLSGNGGINL 1138 DVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNGLRLEFSRQLTPKLTLSGNGGINL Sbjct: 1097 DVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNGLRLEFSRQLTPKLTLSGNGGINL 1156 Query: 1139 SATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGLQHYASQSGTSLGRGRTLNAEVGT 1198 SATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGLQHYASQSGTSLGRGRTLNAEVGT Sbjct: 1157 SATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGLQHYASQSGTSLGRGRTLNAEVGT 1216 Query: 1199 HFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPVGTDPASFRYMPLDSRSWGAALGAG 1258 HFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPVGTDPASFRYMPLDSRSWGAALGAG Sbjct: 1217 HFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPVGTDPASFRYMPLDSRSWGAALGAG 1276 Query: 1259 TVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAGSVVGQDVLSIGAQSTAATPNNPQ 1318 TVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAGSVVGQDVLSIGAQSTAATPNNPQ Sbjct: 1277 TVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAGSVVGQDVLSIGAQSTAATPNNPQ 1336 Query: 1319 RGFELNVLYRWFY 1331 RGFELNVLYRWFY Sbjct: 1337 RGFELNVLYRWFY 1349 >ref|ZP_08273145.1| hypothetical protein IMCC9480_461 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33372.1| hypothetical protein IMCC9480_461 [Oxalobacteraceae bacterium IMCC9480] Length = 1326 Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 605/1339 (45%), Positives = 822/1339 (61%), Gaps = 72/1339 (5%) Query: 4 LVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAEAR 63 LVYP +L+Q+L + + + D+LT+EYLKVFLKA+P ALR LV Q++ LG +AEAR Sbjct: 49 LVYPHRTLEQKLASSELNSKPDRLTVEYLKVFLKAEPNALALRRALVGQLVRLGSYAEAR 108 Query: 64 QQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYPL- 122 + + LQ +DPA + A WLE + + EA+AL A++P R + +R QL+ L+ P Sbjct: 109 EAMRPLQRASDPAIQRDAEWLELSMLEGEAYALSASTPAREVAMQRVRAQLRVLIGLPQQ 168 Query: 123 SAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLP--YGEAVRLGQQSLGMGDYRSS 180 +Q+ L L++ AL+ G+V+ A +A++++ A R P Y EA R +LG+GDYR + Sbjct: 169 DSQRLLVLARTALSAGEVDVAALAYQKI-AARPEILAPEIYAEAAR---AALGLGDYRVA 224 Query: 181 ASFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTR 240 A+ Y AM + ++ RRD F +R LQA G + + AD ++G L +D ATL FL R Sbjct: 225 ANLYFRAMVYTRVIDKRRDYFFAGMRTLQASGEAGDLIASADQHVGTLIDDTATLKFLAR 284 Query: 241 LAQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFTRSLRLTQA 300 LAQ+ANR +AAERY +QLL+LS+ L +Q++ + Sbjct: 285 LAQSANRLDAAERYAKQLLKLSL----------------LERWQGRQLASW--------- 319 Query: 301 LLQQPQQPHQLQQRMQMAMRQARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYTLAY 360 Q P Q + R+ R++R+A D S P LPFDD+ YTL+Y Sbjct: 320 --QSPAQFYAGLNRVDAG--PLRLVRIA--DTSAPG------------LPFDDDAYTLSY 361 Query: 361 NVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHWLAYARLTNDE 420 +FL NRNL DAR +A+SAV QRP D AWRKRLA+V++W+ PE A P WLAYARL+ DE Sbjct: 362 TIFLANRNLNDARRVAESAVLQRPADAAWRKRLAQVNQWNTAPEAALPQWLAYARLSGDE 421 Query: 421 GAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAALLEAR 480 AWD V+++ +G + D A+ HK + EP W+ L+ +E GQPERA ALL R Sbjct: 422 AAWDTVLQLGSGLADIDAQVAAIAHKAEREPASVIWLERLLQVFEASGQPERALALLRTR 481 Query: 481 LRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANALMAAN 540 L ++ + R E+D LA L R G DD++ A L R + EFG + AL AN Sbjct: 482 L-------SHKSLPALRRRELDLLATLAERTGHDDESLAALRRLQAEFGTDSTVALRIAN 534 Query: 541 LLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGYDQLLATNQAA 600 LY A L +A VAP + DFWR YAELA L D AR G LLA + Sbjct: 535 NLYRANHPAAAFAELERAGAVAPVSDGDFWRAYAELAMLLQNDAAARTGLRSLLAGDIQN 594 Query: 601 EGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLDSIT 660 + D++NL+ +++ +P AAA LAEF + A+QAL R RL D G + L +T Sbjct: 595 DNDLTNLIGLLEVSQPLAAAQLAEFAYASKGNPRTALQALNLRARLADWAGARALLARLT 654 Query: 661 PQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILIATRD 720 P+Q LE+ +L++R++ Q +D GA DMR AL+L P ++RA ++W+L+A RD Sbjct: 655 PEQRRLLEQDPAFLTLRASIAQSGNDLDGALRDMRAALALRPNEMDMRAALLWMLVAKRD 714 Query: 721 TELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFPQNDYLWLLSYAE 780 T LN+AL+LWAADAE LW P+AAAN+SLNRQ+ ALHWFRK GF +DYLWL+SYAE Sbjct: 715 TVELNKALSLWAADAETNAVLWDPYAAANMSLNRQDRALHWFRKGGFRSDDYLWLMSYAE 774 Query: 781 ALDASGQPDLAWRIRRRAWIELRDPARLRNIPPAQLREWRDRLAALAPLFMPADASNKVM 840 LDA Q + AWRIRR W++LR P LR P QL RDRL A+APLFM D +++VM Sbjct: 775 VLDAVSQKEQAWRIRRHVWLDLRKPDVLRKANPDQLITLRDRLVAVAPLFMNGDGADRVM 834 Query: 841 RALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARSDARQHAQ-------DQDVSARLMD 893 RALL +D++ LV A PP P ++M AR D Q D+ +A+ Sbjct: 835 RALLRADISTLV---AFVPPQAPPRTGREM--LARLDQPDPVQLPSLQQRDKQRAAQRSS 889 Query: 894 GPA-ALFAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLARTWLATRFATQLDKPL 952 P AL AP RP+DDARL+ASARELALAYA+N+ +DLA W A+RFA QLDKPL Sbjct: 890 APMDALLAPA--PADRPQDDARLTASARELALAYALNRNANDLAAGWFASRFAGQLDKPL 947 Query: 953 WGELAMALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPLAQTLAFDQLQRLPGDD 1012 WGEL++ L +DR LNRLLD++ DWLPMYDRIEAA+ AGR LAQT+AFDQL LP D+ Sbjct: 948 WGELSLLLAAEDRTQLNRLLDDVPDWLPMYDRIEAAQRAGRPGLAQTMAFDQLALLPTDE 1007 Query: 1013 ELHARLTGLVTDDPAKFSVGYTATREFPLATKLFTLSSGVNLTPGTRLDFGYIERRQSVD 1072 +LH RLT + T+ PA FS PL+++ L + VNLTPG RL +R+ S Sbjct: 1008 DLHLRLTTMTTEQPASFSATVNQMTVSPLSSRETELQTSVNLTPGLRLTVALTDRQYSSL 1067 Query: 1073 DSTLLGDVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNGLRLEFSRQLTPKLTLSG 1132 D T L ++P DR +LR++++ G+VSA +Q RQ S GLRL++S L+P ++++G Sbjct: 1068 DDTALVNLPGSDRQLELSLRKQLDGGYVSATVQQRQGAGSNTGLRLDYSLTLSPSVSVAG 1127 Query: 1133 NGGINLSATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGLQHYASQSGTSLGRGRTL 1192 G+ AT+SA +RV A RDG E + LSR EYLRLG YASQ+G LG G Sbjct: 1128 TAGVRQLATESALLRVAAMRDGVESTVTYALSRAEYLRLGLAWHRYASQAGNVLGSGGNW 1187 Query: 1193 NAEVGTHFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPVGTDPASFRYMPLDSRSWG 1252 N E GTH R+EYPN+TLRAF + + + D D+L+ L+P GTD R +PL+ R G Sbjct: 1188 NVEAGTHLRLEYPNITLRAFASGSAYRDRNQIDALVGNLLPAGTDLTQIRALPLNERLVG 1247 Query: 1253 AALGAGTVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAGSVVGQDVLSIGAQSTAA 1312 +LG GTV+E+ YTRAWRP+AE G+TR+ G G NLRAGIAGSV+GQD++++ T++ Sbjct: 1248 ISLGLGTVIESRYTRAWRPFAELGLTRSDVTGGGDNLRAGIAGSVLGQDLMTLRGLRTSS 1307 Query: 1313 TPNNPQRGFELNVLYRWFY 1331 + +PQ E+ + Y+WF+ Sbjct: 1308 SAASPQGSQEVGLDYKWFF 1326 >ref|YP_003751808.1| polysaccharide transport system component signal peptide protein (ragB) [Ralstonia solanacearum PSI07] emb|CBJ50511.1| putative polysaccharide transport system component signal peptide protein (ragB) [Ralstonia solanacearum PSI07] Length = 1334 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 457/1365 (33%), Positives = 669/1365 (49%), Gaps = 94/1365 (6%) Query: 2 FALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAE 61 A+++P+ L+ RL G+ D L++ YL+ +L+ +P + A L Q + G+ E Sbjct: 29 LAMMFPREGLETRL---LGGGKVDALSMAYLEAWLRVRPNDGEFLAVLAAQYVRTGRLDE 85 Query: 62 ARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYP 121 A LA ++ D AA A L+ IR+Q A+AL P R L ELR L Q + Y Sbjct: 86 AEAMLARMRALHDKAASREALLLDIAIREQRAYALQPGDPRRKAYLDELRGLLGQALDYR 145 Query: 122 LSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSSA 181 SA + L+ A L D A F + L+ + ++ R + +LG+GDYR++A Sbjct: 146 WSATEMEILANQARGL-DAGAIAARFYQQLSRQDPAHAAQWQS-RSAEIALGVGDYRAAA 203 Query: 182 SFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTRL 241 + A A SLEARR FI L+ LQAGGL EA+ A +GPL +D+ TL FLTRL Sbjct: 204 AANFAAQAAATSLEARRQYFIGGLKALQAGGLLDEAMREAQQRVGPLIDDQETLRFLTRL 263 Query: 242 AQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFT-RSLRLTQA 300 A A +R + A+ Y R+LL LS RA G+ ALA + F R L L Sbjct: 264 AMACDRADLADHYARRLLHLSW-RATP------DGAIALAAGTVRHDWVFAGRPLPLP-- 314 Query: 301 LLQQPQQPHQLQQRMQMAMR---QARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYT 357 P + L +A R AR+ RVA A + + PF+ E Y Sbjct: 315 ---SPSEAVFLDGVEGVARRPRGAARIRRVADAGSANAAPPAGAQAAARGIAPFNAEDYD 371 Query: 358 LAYNVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHWLAYARLT 417 LA+ VFLG+ NL DA +A++AVRQRPD W +R A+V+EW+ P A HWLAYA+ T Sbjct: 372 LAFRVFLGSGNLNDAMRVAEAAVRQRPDLKIWTERAAQVAEWNHQPMVALQHWLAYAQAT 431 Query: 418 NDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAALL 477 D+ AW NV+R+A E AL+HK +P D K ++ +VA YE +G+P A L Sbjct: 432 GDDAAWRNVLRLAPALNEDHAYLAALRHKAGSQPADMKLLDQIVAAYERLGEPAEGLAYL 491 Query: 478 EARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANALM 537 ++ R N A ER A+L R G+DD A A R ++EFGP A AL Sbjct: 492 DSVAR-----GPNRQAVLER------YAQLAERAGKDDLAYAGYQRLQKEFGPHARYALK 540 Query: 538 AANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGYDQLLATN 597 AN+LY+R + E AL ++ A A P + +WRT+A+LAR D+ R+ Y QLL Sbjct: 541 LANMLYVRDQFELALAAMQTAERTASPTDDLYWRTFAQLARLNQRDDLMREAYRQLLIGG 600 Query: 598 QAAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLD 657 A D+S MV + P A LAE +R+ +AL Y R + L Sbjct: 601 GAVVDDLSA-MVEFYDASPIDAGRLAELAYRKDGGMIHLQRALYYYTRAGAFHRVEGLLA 659 Query: 658 SITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILIA 717 S+TP Q AA E+ L+ R+ + + +A A D+R A++L ++V+A ++W LI Sbjct: 660 SLTPAQRAAAEQSAGVLAARAEYYRQNGQWAAAMRDLRRAVALPDAGSDVKAALLWSLID 719 Query: 718 TRDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFP-QNDYLWLL 776 T L RAL W +AEN P WG +AAA + L N+AL + + G +ND LWLL Sbjct: 720 AGQTAELKRALARWRGEAENDPAYWGAYAAAGLQLADANLALRFLGRQGKSMRNDPLWLL 779 Query: 777 SYAEALDASGQPDLAWRIRRRAW----------IELRDPARLR-----NIPPAQLRE--- 818 +YA+A + +GQ ++AWR+RR AW ++R P R P L + Sbjct: 780 AYADAREMAGQAEVAWRLRREAWRLLWRGEVAGAKVRTPGERRAAASDEAEPVPLEDGAR 839 Query: 819 --WRDRLAALAPLFMPADASNKVMRALLDSD--VTRLVRSDAAPPPADGPA----LLKDM 870 R R A LA F P D + +++ LL D TR R A +L Sbjct: 840 AELRARRATLAQTFGPGDLAQRLLIELLRDDRRETRAAREGGRAAIAGSELGDLDVLPPE 899 Query: 871 QAAARSDARQ--HAQDQDVSARLMDGPAALFAPTGDTGQRPRDDARLSASARELALAYAM 928 + + +R+ A DQ VS A A+E AL +A+ Sbjct: 900 PPESPAASRKATRASDQLVS----------------------------AIAKEAALGWAL 931 Query: 929 NQGDSDLARTWLATRFATQLDKPLWGELAMALGNDDRQGLNRLLDNLADWLPMYDRIEAA 988 +Q +DLAR WL ++A +P + E+++AL D Q LNRLLD+ D LP+ RI+A Sbjct: 932 SQEANDLARAWLLQQYARGAVRPAYAEISIALAERDLQTLNRLLDDAPDRLPLAARIDAN 991 Query: 989 RVAGRVPLAQTLAFDQLQRLPGDDELHARLTGLVTDDPAKFSVGYTATREFPLATKLFTL 1048 + R+ AQ LAFD L P + +LH R + + T ++ PL + Sbjct: 992 AMTDRLGEAQRLAFDGLATAPDEPQLHQRAEETLLANAQALEPRETWYKQAPLTYFESSA 1051 Query: 1049 SSGVNLTPGTRLDFGYIERRQSVDDSTLLGDVPAVDRLYSFTLRRRIEEGFVSAALQHRQ 1108 ++G LT + +R Q + LL VPA DR + + R ++ + RQ Sbjct: 1052 AAGTRLTDHYSMLLRATQRNQRSINDLLLTGVPAQDRSVDWISQYRTQDTQWKGTVGWRQ 1111 Query: 1109 AMTSFNGLRLEFSRQLTPKLTLSGNGGINLSATDSAFMRVGAKRDGGELNLNVQLSRTEY 1168 + SF RL+ T + + G N A+++ +RVG +D + N +L++ +Y Sbjct: 1112 GLASFTTFRLDGLLGQTGPVVTELSVGRNQPASETPQLRVGGVKDVVTIGGNWRLTQRQY 1171 Query: 1169 LRLGGGLQHYASQSGTSLGRGRTLNAEVGTHFRVEYPNLTLRAFVNDAKFTDYGNSDSLI 1228 +R + Q + LG G + E+G FRVEYP+ T+R A+++ G +L+ Sbjct: 1172 VRARMEGDRFYGQDRSFLGSGTVFDGEIGHRFRVEYPDYTIRLTGTYARYSASGAPGALL 1231 Query: 1229 ARLVPVGTDPASFRYMPLDSRSWGAALGAGTVVENAYTRAWRPYAEFGMTRTSDIGWGRN 1288 RL+P G A+ +++P +G G GT + Y RAWRP+ + GM + GWG Sbjct: 1232 GRLLPAGVPMAAEQFVPRSFAQYGLLFGFGTDYLDRYARAWRPFLDAGMLHDNREGWGVQ 1291 Query: 1289 LRAGIAGSVVGQDVLS--IGAQSTAATPNNPQRGFELNVLYRWFY 1331 ++ G AGSV+G D L+ IG S +P E+ + YRW Y Sbjct: 1292 VQLGAAGSVLGNDHLALYIGHASITRAGTSPM--TEIGLRYRWLY 1334 >ref|YP_003745050.1| polysaccharide transporter component signal peptide protein (ragb) [Ralstonia solanacearum CFBP2957] emb|CBJ42423.1| putative polysaccharide transport system component signal peptide protein (ragB) [Ralstonia solanacearum CFBP2957] Length = 1319 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 444/1350 (32%), Positives = 667/1350 (49%), Gaps = 79/1350 (5%) Query: 2 FALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAE 61 A+++P+ L+ RL G+ D L++ YL+ +L+ +P + A L Q + G+ E Sbjct: 29 LAMMFPRERLETRL---LEGGKVDALSMAYLEAWLRVRPNDGEFLAVLAAQYVRTGRLDE 85 Query: 62 ARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYP 121 A LA ++ A A L+ I +Q A+AL P R L LR L Q + Y Sbjct: 86 AEAMLARMRGLHTKALDREALLLDIAIHEQRAYALQPGDPHRKAYLDGLRGLLGQALGYR 145 Query: 122 LSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSSA 181 +A + L+ A L D A F RLL+++ ++ R + +LG+G+YR SA Sbjct: 146 WNASELEILASQARGL-DAGAVAAQFYRLLSKQDPAHAAQWQS-RSAEIALGVGNYRESA 203 Query: 182 SFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTRL 241 + A A SL+ RR FI+ L+ LQAGGL +EA++ A+ +GPL +D TL FLTRL Sbjct: 204 AANFAAQAAATSLDERRRYFISGLKALQAGGLLEEAMDEAERRVGPLIDDPETLRFLTRL 263 Query: 242 AQAANRPEAAERYVRQLLQLSM------GRAAAT-LARAGQGSA-------ALATVHFQQ 287 A A NR + A+RY R+LL LS G A AT LAR A +LA V F Sbjct: 264 AMACNRADLADRYARRLLHLSWEAVPDAGIALATGLARHDWAFAGRPLPLPSLAEVVFLD 323 Query: 288 MSEFTRSLRLTQALLQQPQQPHQLQQRMQMAMRQARVIRVAAADPSQPPAAEVNASRELA 347 E + +R++ A AR+ RVA D + + Sbjct: 324 GIE-------------------GVARRLRGA---ARIRRVADTDRAPAAPPADAQAVAHG 361 Query: 348 RLPFDDEIYTLAYNVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQAT 407 PF+ E Y LA+ VFLG+ NL DA +A++AVRQRPD W +R A+V+EW+ P A Sbjct: 362 IAPFNAEDYDLAFRVFLGSGNLNDAMRVAEAAVRQRPDLKLWIERAAQVAEWNRQPMVAL 421 Query: 408 PHWLAYARLTNDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENV 467 HWL+YA+ T D+ AW +V+R+A E AL+HK +P D K ++ +VA YE + Sbjct: 422 QHWLSYAQATGDDVAWRHVLRLAPALNEDHAYLAALRHKAGSQPADLKLLDQIVAAYERL 481 Query: 468 GQPERAAALLEARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQE 527 G+P + A L++ R R M+ A+L R G+DD+A A R ++E Sbjct: 482 GEPAQGLAYLDSVARG-----------PNRQAVMERYAQLAERAGKDDEAYAGYQRLQKE 530 Query: 528 FGPSAANALMAANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEAR 587 FGP A AL AN+LY+R + EQAL +++ A A P + +WRT+A+LAR D+ R Sbjct: 531 FGPHARYALKLANMLYVRDQFEQALAVMQTAERTAAPTDDVYWRTFAQLARLNQRDDLMR 590 Query: 588 QGYDQLLATNQAAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLN 647 + Y QLL A D+S MV + P A LAE +R+ +AL Y R Sbjct: 591 EAYRQLLIGGGAMVDDLSA-MVEFYDASPIDAGRLAELAYRKDGGPLHLQRALYYYTRAR 649 Query: 648 DLDGGQRFLDSITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEV 707 + L S+TP Q AA E+ L+ R+ + + +A A D+ A++L ++V Sbjct: 650 AFHRVEGLLASLTPAQRAAAEQSAGVLAARAEYYRQTGQWAAAMRDLHRAVALPDAGSDV 709 Query: 708 RAEMIWILIATRDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGF 767 +A ++W LI + L RAL W DAE+ WG +AAA + L N+ALH+ + G Sbjct: 710 KAALLWSLIDSGQAAELKRALARWRGDAESDSAYWGAYAAAGLQLADANLALHFLGRQGK 769 Query: 768 P-QNDYLWLLSYAEALDASGQPDLAWRIRRRAWIELRDPARLRNIPPAQLRE-----WRD 821 +ND LWLL+YA+A + +GQ + AWR+RR AW L + PA L + R Sbjct: 770 SMRNDPLWLLAYADAREMAGQAEAAWRLRREAWRLLWRGEQPGEGEPAPLEDGARAELRA 829 Query: 822 RLAALAPLFMPADASNKVMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARSDARQH 881 R A LA F D + +++ LL D R + G A L + Sbjct: 830 RRATLAQTFGSGDLAQRLLIELLRDD-----RRETRAAREGGRAALAGSELG-------- 876 Query: 882 AQDQDVSARLMDGPAALFAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLARTWLA 941 D+ + P + P D +SA A+E AL +A++Q +DLAR WL Sbjct: 877 ----DIDVLPAEPPES---PAAARKAARASDQLVSALAKEAALGWALSQEANDLARAWLL 929 Query: 942 TRFATQLDKPLWGELAMALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPLAQTLA 1001 ++ + +P + E+++AL D Q LNRLLD+ D LP+ RI+A + R+ AQ LA Sbjct: 930 QQYTRGMARPAYAEISIALAERDLQTLNRLLDDTPDRLPLAARIDANVMTDRLGEAQRLA 989 Query: 1002 FDQLQRLPGDDELHARLTGLVTDDPAKFSVGYTATREFPLATKLFTLSSGVNLTPGTRLD 1061 FD L P + +LH R + + T ++ PL + ++G LT + Sbjct: 990 FDGLATAPDEPQLHQRAEETLLANAQALEPRETWYKQAPLTYFESSAAAGTRLTDHYSML 1049 Query: 1062 FGYIERRQSVDDSTLLGDVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNGLRLEFS 1121 +R Q DS L VPA DR + + R ++ + RQ + SF RL+ Sbjct: 1050 LRATQRNQQSIDSQQLTGVPAQDRSVDWISQYRTQDAQWKGTVGWRQGLASFTTFRLDGL 1109 Query: 1122 RQLTPKLTLSGNGGINLSATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGLQHYASQ 1181 T + + G N A+++ +RVG +D + N +L++ +Y+R + Q Sbjct: 1110 LGQTGPVVTELSVGRNQPASETPQLRVGGVKDLVTVGGNWRLTQRQYVRARVEGDRFYGQ 1169 Query: 1182 SGTSLGRGRTLNAEVGTHFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPVGTDPASF 1241 + LG G L+ E+G FRVEYP+ T+R A+++ G +L+ RL+P G + Sbjct: 1170 DRSFLGSGMVLDGEIGHRFRVEYPDYTIRLTGTYARYSASGAPGTLLGRLLPAGVPMSVE 1229 Query: 1242 RYMPLDSRSWGAALGAGTVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAGSVVGQD 1301 +++P +G G GT + Y RAWRP+ + GM R + GWG ++ G AGSV+G D Sbjct: 1230 QFVPRSFAQYGLLFGFGTDYLDRYARAWRPFLDAGMLRDNRSGWGVQVQVGAAGSVLGND 1289 Query: 1302 VLSIGAQSTAATPNNPQRGFELNVLYRWFY 1331 L++ + T E+ + YRW Y Sbjct: 1290 HLAVYIGHASITRAGTSPMTEIGLRYRWLY 1319 >ref|ZP_07676406.1| tetratricopeptide TPR_4 [Ralstonia sp. 5_7_47FAA] gb|EFP64978.1| tetratricopeptide TPR_4 [Ralstonia sp. 5_7_47FAA] Length = 1343 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 436/1370 (31%), Positives = 667/1370 (48%), Gaps = 95/1370 (6%) Query: 2 FALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAE 61 AL++P+ L+ RL G+ D L++ YL+ +L+ +P + + L Q + G+ AE Sbjct: 29 LALMFPRERLEARLL---EGGKVDALSVAYLEAWLRVRPNDGEFLSVLGAQYVRTGRLAE 85 Query: 62 ARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYP 121 A +A ++ D A L+ IR+Q A+AL P+R +L +LR L+Q + Y Sbjct: 86 AEAMVARMRALHDKTLDREALLLDIAIREQRAYALQPNDPQRAAMLVDLRGLLKQALDYR 145 Query: 122 LSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSSA 181 +A + L + L A ++RL + R + R + +LG+G+YR++A Sbjct: 146 WTAAELEMLGAKSRGLDQGAIAIQFYQRLAKQDVARATQW--QARTAEIALGVGEYRAAA 203 Query: 182 SFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTRL 241 + A A S + +R FI L+ LQAG L +A+ A +GPL +D TL FLTRL Sbjct: 204 AANFAAQATATSRDEQRRYFIAGLKALQAGNLLDDAMTEAQRRVGPLIDDTETLRFLTRL 263 Query: 242 AQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFTRSLRLTQAL 301 A A NRP+ A++Y R+LL+LS +AG+G A A V + R Sbjct: 264 AMACNRPDLADQYARRLLRLSW-------HQAGEGIALAAGVARHDWAFAGRP-----EP 311 Query: 302 LQQPQQPHQLQQRMQMAMRQ---ARVIRVA--------AADPSQPPAAEVNASRELARLP 350 L P + +A RQ AR+ VA A S+P A+ A R +A P Sbjct: 312 LPGPADLVFMDGWEGLARRQRHAARIRPVADGSNKADDATSSSKPSGAQAIA-RGIA--P 368 Query: 351 FDDEIYTLAYNVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHW 410 F+ E Y LA+ VF+G+ NL DA +A++AVRQRPD W +R A+V+EW+ P A +W Sbjct: 369 FNAEDYDLAFQVFMGSGNLNDAMRVAEAAVRQRPDLKIWTERAAQVAEWNRQPMAALNYW 428 Query: 411 LAYARLTNDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQP 470 LAYA+ T D+ AW +V+R+A E L+++ PGD K ++ ++A YE +G+P Sbjct: 429 LAYAQSTGDDAAWQHVLRLAPALNEDHAYLAGLRYQASRNPGDMKLLDQVIAAYERLGEP 488 Query: 471 ERAAALLEARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGP 530 A L N+ A+ R ++ A L R G+DD A R ++EFGP Sbjct: 489 VEGLAYL----------NSIAHG-PHRQVVLERYANLAERAGKDDQAYDTYARLQKEFGP 537 Query: 531 SAANALMAANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGY 590 +A AL AN+LY+RG+ QAL + A+ VA P + +WRT+A+LAR D+ +R+ Y Sbjct: 538 NAQYALKLANILYVRGQFAQALSAMEAASKVASPTDDLYWRTFAQLARLNQRDDLSREAY 597 Query: 591 DQLLATNQAAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMR---LN 647 QLL +A D++ M+ + P A LAE FR+ QA+ Y R Sbjct: 598 RQLLIGGRAEPDDLTT-MIDFYDASPIDAGRLAELAFRKDGTMVHLQQAIYYYTRARAFR 656 Query: 648 DLDGGQRFLDSITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEV 707 +DG L S+TP+Q A E+ L R+ + + + A D+R A+SL ++V Sbjct: 657 RIDG---LLASLTPEQRKAAEQSAGVLGARAEYFRQSGQWDAAMRDLRRAVSLPDAGSDV 713 Query: 708 RAEMIWILIATRDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGF 767 +A +W L+ + L RAL LW +AEN WG +AAA + L N+AL + + G Sbjct: 714 KAAFLWGLLDSGLNAELKRALALWRGEAENDSAYWGAYAAAGLQLFDANLALRFLGRQGK 773 Query: 768 P-QNDYLWLLSYAEALDASGQPDLAWRIRRRAWIEL----RDPARLRNIPPAQLR----- 817 Q D LWLL+YA+A + +GQ D AW +RR AW L + PPA R Sbjct: 774 SMQTDPLWLLAYADAREMAGQADAAWALRREAWWLLWRAEDTTGSGKTKPPAGRRVGTRV 833 Query: 818 ----------------EWRDRLAALAPLFMPADASNKVMRALLDSDVTRLVRSDAAPPPA 861 E R R +LA F D S +++ LL D Sbjct: 834 TVGDSDAAPLEEDARTELRARRVSLAQTFGSGDLSQRLLIELLRDDRR------------ 881 Query: 862 DGPALLKDMQAAARSDARQHAQDQDVSARLMDGPAALFAPTGDTGQRPRDDARLSASARE 921 K + RS A ++ D+ + P PT Q D +SA A+E Sbjct: 882 ----ATKQGREGGRS-AMDRSELGDIDTLPPEPPQT---PTDKRKQARVSDQLVSAVAKE 933 Query: 922 LALAYAMNQGDSDLARTWLATRFATQLDKPLWGELAMALGNDDRQGLNRLLDNLADWLPM 981 AL +A++Q +DLAR WL ++ ++ +P + E+++AL D Q LNRLLD+ D +P+ Sbjct: 934 AALGWALSQEANDLARAWLLQQYTRRMTRPAYAEISIALAERDLQTLNRLLDDTPDRIPL 993 Query: 982 YDRIEAARVAGRVPLAQTLAFDQLQRLPGDDELHARLTGLVTDDPAKFSVGYTATREFPL 1041 Y+RI+A + R+ AQ L+F+ L P D++LH R+ + + T ++ PL Sbjct: 994 YNRIDANLMTDRLGEAQRLSFEGLTTAPDDEQLHERVRETLLTNSQALEPRETWFKQAPL 1053 Query: 1042 ATKLFTLSSGVNLTPGTRLDFGYIERRQSVDDSTLLGDVPAVDRLYSFTLRRRIEEGFVS 1101 + ++G+ LT + +R Q D T L VPA DR + + + + Sbjct: 1054 TYFESSAAAGIRLTDHYSMLVRATQRNQRSTDDTQLTGVPAQDRQLDWISQYQTQNAQWK 1113 Query: 1102 AALQHRQAMTSFNGLRLEFSRQLTPKLTLSGNGGINLSATDSAFMRVGAKRDGGELNLNV 1161 + RQ + S RL+ + + G N A ++ +RVG +D + N Sbjct: 1114 GTVGWRQGLGSLYAFRLDGLLGQVGPVGTELSIGRNQPANETPQLRVGGVKDLFSIGNNW 1173 Query: 1162 QLSRTEYLRLGGGLQHYASQSGTSLGRGRTLNAEVGTHFRVEYPNLTLRAFVNDAKFTDY 1221 ++++ EY+R + Q + LG G + E+G FRVEYP+ T+R A++ Sbjct: 1174 RVTQNEYVRARVEGNRFYGQDRSFLGSGMVFDGEIGHRFRVEYPDYTVRVVGTVARYNAT 1233 Query: 1222 GNSDSLIARLVPVGTDPASFRYMPLDSRSWGAALGAGTVVENAYTRAWRPYAEFGMTRTS 1281 G L+ARL+ G P + MP +G G GT + YTRAWRP+ + GM + Sbjct: 1234 GTVSPLMARLLASGAAPVVDQIMPRSFNQFGMLFGFGTDYLDRYTRAWRPFMDAGMLHDN 1293 Query: 1282 DIGWGRNLRAGIAGSVVGQDVLSIGAQSTAATPNNPQRGFELNVLYRWFY 1331 GWG + G+AGSV G D L++ + + T E+ + YRW Y Sbjct: 1294 REGWGVQAQIGVAGSVFGNDHLALYIEHQSITRAGTSPLTEIGLRYRWLY 1343 >gb|AEG68462.1| polysaccharide transport system component protein [Ralstonia solanacearum Po82] Length = 1319 Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust. Identities = 441/1340 (32%), Positives = 668/1340 (49%), Gaps = 59/1340 (4%) Query: 2 FALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAE 61 A+++P+ L+ RL G+ D L++ YL+ +L+ +P + A L Q + G+ E Sbjct: 29 LAMMFPRERLETRL---LEGGKVDALSMAYLEAWLRVRPNDGEFLAVLAAQYVRTGRLDE 85 Query: 62 ARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYP 121 A L ++ A A L+ I +Q A+AL P R L LR L Q + Y Sbjct: 86 AEAMLVRMRGLHSKALDREALLLDIAIHEQRAYALQPGDPHRKAYLDGLRGLLGQALGYR 145 Query: 122 LSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSSA 181 +A + L+ A L D A F RLL+++ ++ R + +LG+G+YR SA Sbjct: 146 WNASELEILASQARGL-DAGAVAAQFYRLLSKQDPAHAAQWQS-RSAEIALGVGNYRESA 203 Query: 182 SFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTRL 241 + A A SL+ RR FI L+ LQAGGL ++A++ A+ +GPL +D TL FLTRL Sbjct: 204 AANFAAQAAATSLDERRRYFIGGLKALQAGGLLEDAMDEAERRVGPLIDDPETLRFLTRL 263 Query: 242 AQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFT-RSLRL--- 297 A A NR + A+RY R+LL LS A +G ALAT + F R L L Sbjct: 264 AMACNRADLADRYARRLLHLSWQ------AVPDEG-IALATGTARHDWVFAGRPLPLPSP 316 Query: 298 TQALLQQPQQPHQLQQRMQMAMRQARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYT 357 +A+ + + +R++ A R RV A + A+ A PF+ E Y Sbjct: 317 AEAVFLDGIEG--VVRRLRGAARIRRVADADRAPAAPSADAQAVAH---GIAPFNAEDYD 371 Query: 358 LAYNVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHWLAYARLT 417 LA+ VFLG+ NL DA +A++AVRQRPD W +R A+V+EW+ P A HWL+YA+ T Sbjct: 372 LAFRVFLGSGNLNDAMRVAEAAVRQRPDLKLWIERAAQVAEWNRQPMVALQHWLSYAQAT 431 Query: 418 NDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAALL 477 D+ AW +V+R+A E AL+HK +P D K ++ +VA YE +G+P + A L Sbjct: 432 GDDVAWRHVLRLAPALNEDHAYLAALRHKAGSQPADMKLLDQIVAAYERLGEPTQGPAYL 491 Query: 478 EARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANALM 537 ++ R N A ER A+L R G+DD+A A R ++EFGP A AL Sbjct: 492 DSVAR-----GPNRQAVLER------YAQLAERAGKDDEAYAGYQRLQKEFGPDARYALK 540 Query: 538 AANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGYDQLLATN 597 AN+LY+R + EQAL +++ AA A P + +WRT+A+LAR D+ R+ Y QLL Sbjct: 541 LANMLYVRDQFEQALAVMQTAARTAAPTDDVYWRTFAQLARLNQRDDLMREAYRQLLIGG 600 Query: 598 QAAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLD 657 A D+S MV + P A LAE +R+ +AL Y R + L Sbjct: 601 GAMVDDLSA-MVEFYDASPIDAGRLAELAYRKDGGTIHLQRALYYYTRAGAFHRVEGLLA 659 Query: 658 SITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILIA 717 S+TP Q AA E+ L+ R+ + + +A A D+ A++L ++V+A ++W LI Sbjct: 660 SLTPAQRAAAEQSAGVLAARAEYYRQTGQWAAAMRDLHRAVALPDAGSDVKAALLWSLID 719 Query: 718 TRDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFP-QNDYLWLL 776 + L RAL W DAE+ WG +AAA + L N+ALH+ + G +ND LWLL Sbjct: 720 SGQAAELKRALARWRGDAESDSAYWGAYAAAGLQLADANLALHFLGRQGKSMRNDPLWLL 779 Query: 777 SYAEALDASGQPDLAWRIRRRAWIELRDPARLRNIPPAQLRE-----WRDRLAALAPLFM 831 +YA+A + +GQ + AWR+RR AW L + PAQL + R R A LA F Sbjct: 780 AYADAREMAGQAEAAWRLRREAWRLLWRGEQPGEGEPAQLEDGARAELRARRATLAQTFG 839 Query: 832 PADASNKVMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARSDARQHAQDQDVSARL 891 D + +++ LL D + AAR R ++ Sbjct: 840 SGDLAQRLLIELLRDD--------------------RRETRAAREGGRAALAGSELGDID 879 Query: 892 MDGPAALFAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLARTWLATRFATQLDKP 951 + P +P + +SA A+E AL +A++Q +DLAR WL ++ + +P Sbjct: 880 VLPPEPPESPAAARKAARASNQLVSALAKEAALGWALSQEANDLARAWLLQQYTRGMARP 939 Query: 952 LWGELAMALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPLAQTLAFDQLQRLPGD 1011 + E+++AL D Q LNRLLD+ D LP+ RI+A + R+ AQ LAF+ L P + Sbjct: 940 AYAEISIALAERDLQTLNRLLDDTPDRLPLAARIDANVMTDRLGEAQRLAFNGLATAPDE 999 Query: 1012 DELHARLTGLVTDDPAKFSVGYTATREFPLATKLFTLSSGVNLTPGTRLDFGYIERRQSV 1071 +LH R + + T ++ PL + ++G LT + +R Q Sbjct: 1000 PQLHQRAEETLLANAQALEPRETWYKQAPLTYFESSAAAGTRLTDHYSMLLRATQRNQRS 1059 Query: 1072 DDSTLLGDVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNGLRLEFSRQLTPKLTLS 1131 DS L VPA DR + + R ++ + RQ + SF RL+ T + Sbjct: 1060 IDSQQLTGVPAQDRSVDWISQYRTQDAQWKGTVGWRQGLASFTTFRLDGLLGQTGPVVTE 1119 Query: 1132 GNGGINLSATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGLQHYASQSGTSLGRGRT 1191 + G N A+++ +RVG +D + N +L++ +Y+R + Q + LG G Sbjct: 1120 LSVGRNQPASETPQLRVGGVKDLVTVGGNWRLTQRQYVRARVEGDRFYGQDRSFLGSGMV 1179 Query: 1192 LNAEVGTHFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPVGTDPASFRYMPLDSRSW 1251 L+ E+G FRVEYP+ T+R A+++ G +L+ RL+P G + +++P + Sbjct: 1180 LDGEIGHRFRVEYPDYTIRLTGTYARYSASGAPGTLLGRLLPAGVPMSVEQFVPRSFAQY 1239 Query: 1252 GAALGAGTVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAGSVVGQDVLSIGAQSTA 1311 G G GT + Y RAWRP+ + GM R + GWG ++ G AGSV+G D L++ + Sbjct: 1240 GLLFGFGTDYLDRYARAWRPFLDAGMLRDNRSGWGVQVQVGAAGSVLGNDHLAVYIGHAS 1299 Query: 1312 ATPNNPQRGFELNVLYRWFY 1331 T E+ + YRW Y Sbjct: 1300 ITRAGTSPMTEIGLRYRWLY 1319 >ref|YP_002982030.1| tetratricopeptide repeat-containing protein [Ralstonia pickettii 12D] gb|ACS63358.1| Tetratricopeptide TPR_4 [Ralstonia pickettii 12D] Length = 1343 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 445/1371 (32%), Positives = 677/1371 (49%), Gaps = 97/1371 (7%) Query: 2 FALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAE 61 AL++P+ L+ RL G+ D L++ YL+ +L+ +P + + L Q + G+ E Sbjct: 29 LALMFPRERLEARLL---EGGKVDALSVAYLEAWLRVRPNDGEFLSVLAAQYVRTGRLPE 85 Query: 62 ARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYP 121 A +A ++ D A L+ IR+Q A+AL P+R +L +LR L+Q + Y Sbjct: 86 AEAMVARMRALHDKTLDREALLLDIAIREQRAYALQPNDPQRAAMLLDLRGLLKQALDYR 145 Query: 122 LSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSSA 181 +A + L+ + L D A V F + LA++ +A R + +LG+G+YR++A Sbjct: 146 WTAAELEMLAAKSRGL-DQGAIAVQFYQRLAKQDVARAAQWQA-RTAEIALGVGEYRAAA 203 Query: 182 SFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTRL 241 + A A SL+ +R FI L+ LQ+G L +A+ A +GPL +D TL FLTRL Sbjct: 204 AANFAAQATATSLDEQRRYFIAGLKALQSGNLLDDAMTEAQRRVGPLIDDTETLRFLTRL 263 Query: 242 AQAANRPEAAERYVRQLLQLSMGRAAATLARA-GQGSAALATVHFQQMSEFTRSLRLTQA 300 A A NRP+ A++Y R+LL+LS +A +A A G G A F E S A Sbjct: 264 AMACNRPDLADQYARRLLRLSRYQAQERVALASGVGRHDWA---FAGRPEPLPS----PA 316 Query: 301 LLQQPQQPHQLQQRMQMAMRQARVIRVA--------AADPSQPPAAEVNASRELARLPFD 352 L P L +R + A AR+ VA AA +QP A+ A R +A PF+ Sbjct: 317 DLVFMDGPEGLARRQRYA---ARIRPVADKQDKAGDAASSAQPSGAQAIA-RGIA--PFN 370 Query: 353 DEIYTLAYNVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHWLA 412 E Y LA+ VF+G+ NL DA +A++AVRQRPD W +R A+V+EW+ P A +WLA Sbjct: 371 AEDYDLAFQVFMGSGNLNDAMRVAEAAVRQRPDLKIWTERAAQVAEWNRQPMAALNYWLA 430 Query: 413 YARLTNDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPER 472 YA+ T D+ AW +V+R+A E AL+++ PGD K ++ ++A YE +G+P + Sbjct: 431 YAQSTGDDAAWHHVLRLAPALNEDHAYLAALRYQASRNPGDMKLLDQVIAAYERLGEPVQ 490 Query: 473 AAALLEARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSA 532 A L+ + R ++ A L R G+D+ A VR ++EFGP+A Sbjct: 491 GLAYLD-----------SIAHGPHRQVVLERYANLAERAGKDEPAYDTYVRLQKEFGPNA 539 Query: 533 ANALMAANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGYDQ 592 AL AN+LY+RG+ QAL ++ A A P + +WRT+A+LAR D+ +R Y Q Sbjct: 540 RYALKLANILYVRGQFAQALAAMQAADKTASPTDDLYWRTFAQLARLNQRDDLSRAAYRQ 599 Query: 593 LLATNQAAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGG 652 LL +A D++ M+ + P A LAE FR+ QA+ Y R Sbjct: 600 LLIGGRAEPDDLTT-MIDFYDASPIDAGRLAELAFRKAGTMVHLQQAIYYYTRARSFRRI 658 Query: 653 QRFLDSITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMI 712 + L S+TP+Q A E+ L R+ + + + A D+R A+SL ++V+A + Sbjct: 659 EGLLASLTPEQRRAAEQSAGVLGARAEYFRQSGQWDAAMRDLRRAVSLPDAGSDVKAAFL 718 Query: 713 WILIATRDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWF-RKSGFPQND 771 W L+ + L RAL LW +AEN WG +AAA + L N+AL + R+S Q D Sbjct: 719 WGLLDSGQNAELKRALALWRNEAENDSAYWGAYAAAGLQLFDANLALRYLGRQSKSMQTD 778 Query: 772 YLWLLSYAEALDASGQPDLAWRIRRRAWIEL----------------------------R 803 LWLL+YA+A + +GQ D AW +RR AW L Sbjct: 779 PLWLLAYADAREMAGQADAAWALRREAWWLLWRAEDSTGTGKTKLPTGRRAGTRVAVGDA 838 Query: 804 DPARLRNIPPAQLREWRDRLAALAPLFMPADASNKVMRALLDSD--VTRLVRSDAAPPPA 861 D A L A+LR R +LA F D S +++ LL D T+L R Sbjct: 839 DAAPLEEDARAELRA---RRVSLAQTFGSGDLSQRLLIELLRDDRRATKLARE------- 888 Query: 862 DGPALLKDMQAAARSDARQHAQDQDVSARLMDGPAALFAPTGDTGQRPRDDARLSASARE 921 RS A ++ D+ L P L PT D +SA A+E Sbjct: 889 -----------GGRS-AIDKSELGDIDT-LPPEPPQL--PTDKRKNARVSDQLVSAVAKE 933 Query: 922 LALAYAMNQGDSDLARTWLATRFATQLDKPLWGELAMALGNDDRQGLNRLLDNLADWLPM 981 AL +A++Q +DLAR WL ++ ++ +P + E+++AL D Q LNRLLD+ D +P+ Sbjct: 934 AALGWALSQEANDLARAWLLQQYTRRMTRPAYAEISIALAERDLQTLNRLLDDTPDRIPL 993 Query: 982 YDRIEAARVAGRVPLAQTLAFDQLQRLPGDDELHARLTGLVTDDPAKFSVGYTATREFPL 1041 Y+RI+A + R+ AQ L+F+ L P D++LH R+ + + T ++ PL Sbjct: 994 YNRIDANVMTDRLGEAQRLSFEGLSTAPDDEQLHERVQETLLTNAQALEPRETWFKQAPL 1053 Query: 1042 ATKLFTLSSGVNLTPGTRLDFGYIERRQSVDDSTLLGDVPAVDRLYSFTLRRRIEEGFVS 1101 + ++G+ LT + +R Q D T L VPA DR + + + + Sbjct: 1054 TYFETSAAAGIRLTDHYSMLVRATQRNQRSTDDTQLTGVPAQDRQVDWISQYQTQNAQWK 1113 Query: 1102 AALQHRQAMTSFNGLRLE-FSRQLTPKLTLSGNGGINLSATDSAFMRVGAKRDGGELNLN 1160 + RQ + S RL+ Q+ P T + G N A ++ +RVG +D + N Sbjct: 1114 GTVGWRQGLASIYAFRLDGLLGQVGPVGT-ELSIGRNQPANETPQLRVGGVKDLFSIGNN 1172 Query: 1161 VQLSRTEYLRLGGGLQHYASQSGTSLGRGRTLNAEVGTHFRVEYPNLTLRAFVNDAKFTD 1220 ++++ EY+R + Q + LG G + E+G FRVEYP+ T+R A++ Sbjct: 1173 WRVTQNEYVRARVEGNRFYGQDRSFLGSGMVFDGEIGHRFRVEYPDYTVRVVGTVARYNA 1232 Query: 1221 YGNSDSLIARLVPVGTDPASFRYMPLDSRSWGAALGAGTVVENAYTRAWRPYAEFGMTRT 1280 G L+ARL+P G + MP +G G GT + YTRAWRP+ + GM Sbjct: 1233 TGTVSPLMARLLPSGAALDVDQIMPRSFNQFGMLFGFGTDYLDRYTRAWRPFMDAGMLHD 1292 Query: 1281 SDIGWGRNLRAGIAGSVVGQDVLSIGAQSTAATPNNPQRGFELNVLYRWFY 1331 + GWG + G+AGSV G D L++ + + T E+ + YRW Y Sbjct: 1293 NREGWGVQAQLGVAGSVFGNDHLALYFEHQSITRAGTSPLTEIGLRYRWLY 1343 >emb|CCA84623.1| putative polysaccharide transport system component signal peptide protein (ragB) [Ralstonia syzygii R24] Length = 1334 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 449/1358 (33%), Positives = 658/1358 (48%), Gaps = 80/1358 (5%) Query: 2 FALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAE 61 A+++P+ L+ RL G+ D L++ YL+ +L+ +P + A L Q + G+ E Sbjct: 29 LAMMFPREGLETRL---LGGGKVDALSMAYLEAWLRVRPNDGEFLAVLAAQYVRTGRLDE 85 Query: 62 ARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYP 121 A LA ++ D AA A L+ IR+Q A+AL P R L ELR L Q + Y Sbjct: 86 AEAMLARMRALHDKAASREALLLDIAIREQRAYALQPGDPRRKAYLDELRGLLGQALDYR 145 Query: 122 LSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSSA 181 SA + L+ A L A +++L + R + R + +LG+GDYR++A Sbjct: 146 WSATEMEILANQARGLDAGAIAAKFYQQLSRQDPARAAQWQS--RSAEIALGVGDYRAAA 203 Query: 182 SFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTRL 241 + A A SLEARR FI L+ LQAGGL EA+ A +GPL +D+ TL FLTRL Sbjct: 204 AANFAAQAAATSLEARRQYFIGGLKALQAGGLLDEAMREAQQRVGPLIDDQETLRFLTRL 263 Query: 242 AQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFT-RSLRLTQA 300 A A +R + A+ Y R+LL LS G+ ALA + F R L L Sbjct: 264 AMACDRADLADHYARRLLHLSWQATP-------DGAIALAAGTARHDWVFAGRPLPLP-- 314 Query: 301 LLQQPQQPHQLQQRMQMAMR---QARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYT 357 P + L +A R AR+ RVA A + + PF+ E Y Sbjct: 315 ---SPSEAVFLDGVEGVARRPRGAARIRRVADAGSASAAPPAGAQAAARGIAPFNAEDYD 371 Query: 358 LAYNVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHWLAYARLT 417 LA+ VFLG+ NL DA +A++AVRQRPD W +R A+V+EW+ P A HWLAYA+ T Sbjct: 372 LAFRVFLGSGNLNDAMRVAEAAVRQRPDLKIWTERAAQVAEWNHQPMVALQHWLAYAQAT 431 Query: 418 NDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAALL 477 D+ AW NV+R+A E AL HK +P D K ++ +VA YE +G+P A L Sbjct: 432 GDDAAWRNVLRLAPALNEDHAYLAALHHKAGSQPADMKLLDQIVAAYERLGEPAEGLAYL 491 Query: 478 EARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANALM 537 ++ R N A ER A+L R G+DD A A R + EFGP A AL Sbjct: 492 DSVAR-----GPNRQAVLER------YAQLAERAGKDDQAYAGYQRLQNEFGPHARYALK 540 Query: 538 AANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGYDQLLATN 597 AN+LY+R + EQAL ++ A +A P + +WRT+A+LAR D+ R+ Y QLL Sbjct: 541 LANMLYVRDQFEQALAAMQTAEHIASPTDDLYWRTFAQLARLNQRDDLMREAYRQLLIGG 600 Query: 598 QAAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLD 657 A D+S MV + P A LAE +R+ +AL Y R + L Sbjct: 601 GAGVDDLSA-MVEFYDASPIDAGRLAELAYRKDGGMIHLQRALYYYTRAGAFHRVEGLLA 659 Query: 658 SITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILIA 717 S+TP Q AA E+ L+ R+ + + +A A D+R A++L ++V+A ++W LI Sbjct: 660 SLTPAQCAAAEQSAGVLAARAEYYRQNGQWAAAMRDLRRAVALPDAGSDVKAALLWSLID 719 Query: 718 TRDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFP-QNDYLWLL 776 L RAL W +AEN P WG +AAA + L N+AL + + G +ND LWLL Sbjct: 720 AGQPAELKRALARWRGEAENDPAYWGAYAAAGLQLADANLALRFLGRQGKSMRNDPLWLL 779 Query: 777 SYAEALDASGQPDLAWRIRRRAWI----------ELRDPARLR-----NIPPAQLRE--- 818 +YA+A + +GQ ++AWR+RR AW ++R P R P L + Sbjct: 780 AYADAREMAGQAEVAWRLRREAWRLLWRGEAAGGKVRAPGERRAAASDEAEPVPLEDGAR 839 Query: 819 --WRDRLAALAPLFMPADASNKVMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARS 876 R R A LA F P D + +++ LL D + A + L D+ Sbjct: 840 AELRARRATLAQTFGPGDLAQRLLIELLRDDRRETRAAREGGRAAIAGSELGDLDVLPPE 899 Query: 877 DARQHAQDQDVSARLMDGPAALFAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLA 936 A + + R D + A G LS A +LA A+ + Q Sbjct: 900 PPESPAASRKAT-RASDQLVSAIAKEAALGW------ALSQEANDLARAWLLQQ------ 946 Query: 937 RTWLATRFATQLDKPLWGELAMALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPL 996 TR A +P + E+++AL D Q LNRLLD D LP+ RI+A + R+ Sbjct: 947 ----YTRGAV---RPAYAEISIALAERDLQTLNRLLDEAPDRLPLAARIDANAMTDRLGE 999 Query: 997 AQTLAFDQLQRLPGDDELHARLTGLVTDDPAKFSVGYTATREFPLATKLFTLSSGVNLTP 1056 AQ LAFD L P + +LH R + + T ++ PL + ++G LT Sbjct: 1000 AQRLAFDSLTTAPDEPQLHQRAEETLLANAQALEPRETWYKQAPLTYFESSAAAGTRLTD 1059 Query: 1057 GTRLDFGYIERRQ-SVDDSTLLGDVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNG 1115 + +R Q S+DD L G VPA DR + + R ++ + RQ + SF Sbjct: 1060 HYSMLLRATQRNQRSIDDLQLTG-VPAQDRSVDWISQYRTQDAQWKGTVGWRQGLASFTT 1118 Query: 1116 LRLEFSRQLTPKLTLSGNGGINLSATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGL 1175 RL+ T + + G N A+++ +RVG +D + N +L++ +Y+R Sbjct: 1119 FRLDGLLGQTGPVVTELSVGRNQPASETPQLRVGGVKDVVTIGGNWRLTQRQYVRARVEG 1178 Query: 1176 QHYASQSGTSLGRGRTLNAEVGTHFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPVG 1235 + Q + LG G ++E+G FR+EYP+ T+R A+++ G +L+ RL+P G Sbjct: 1179 DRFYGQDRSFLGSGTVFDSEIGHRFRMEYPDYTIRLTGTYARYSASGAPGALLGRLLPAG 1238 Query: 1236 TDPASFRYMPLDSRSWGAALGAGTVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAG 1295 A+ +++P +G G GT + Y RAWRP+ + GM + GWG ++ G AG Sbjct: 1239 VPMAAEQFVPRSFAQYGLLFGFGTDYLDRYARAWRPFLDVGMLHDNREGWGVQVQLGAAG 1298 Query: 1296 SVVGQDVLS--IGAQSTAATPNNPQRGFELNVLYRWFY 1331 SV+G D L+ IG S +P E+ + YRW Y Sbjct: 1299 SVLGNDHLALYIGHASITRAGTSPM--TEIGLRYRWLY 1334 >emb|CCA79556.1| putative polysaccharide transport system component signal peptide protein (ragB) [blood disease bacterium R229] Length = 1609 Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust. Identities = 435/1359 (32%), Positives = 647/1359 (47%), Gaps = 79/1359 (5%) Query: 2 FALVYPKVSLQQRLEVANASGRGDQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFAE 61 A+++P+ L+ RL G+ D L++ YL+ +L+ +P + A L Q + G+ E Sbjct: 301 LAMMFPREGLETRLL---GGGKVDALSMAYLEAWLRVRPNDGEFLAVLAAQYVRTGRLDE 357 Query: 62 ARQQLAFLQMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLMTYP 121 A LA ++ D AA A L+ IR+Q A+AL P R L ELR L Q + Y Sbjct: 358 AEAMLARMRALHDKAASREALLLDIAIREQRAYALQPGDPRRKAYLDELRGLLGQALDYR 417 Query: 122 LSAQQWLGLSQDALALGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLGMGDYRSSA 181 SA + L+ A L D A F + L+ + ++ R + +LG+GDYR++A Sbjct: 418 WSATEMEILANQARGL-DAGAIAARFYQQLSRQDPAHAAQWQS-RSAEIALGVGDYRAAA 475 Query: 182 SFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKATLLFLTRL 241 + A A SLEARR FI L+ QAGGL EA+ A +GPL +D+ TL FLTRL Sbjct: 476 AANFAAQAAATSLEARRQYFIGGLKAQQAGGLLDEAMREAQQRVGPLIDDQETLRFLTRL 535 Query: 242 AQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFTRSLRLTQAL 301 A A +R + A+ Y R+LL LS RA G+ AL + F R Sbjct: 536 AMACDRADLADHYARRLLHLSW-RATP------DGAIALVAGTVRHDWVFAGRPRP---- 584 Query: 302 LQQPQQPHQLQQRMQMAMR---QARVIRVAAADPSQPPAAEVNASRELARLPFDDEIYTL 358 L P + L + R AR+ RVA A + + PF+ E + Sbjct: 585 LPSPSEAVFLDGVEGVERRPRGAARIRRVADAGSANAAPPAGAQAAARGIAPFNAEDFDP 644 Query: 359 AYNV-FLGNRN--LTDARLLAQSAVRQRPDDPAWRKRLAEVSEWSGVPEQATPHWLAYAR 415 + FLG+ T R RQRPD W +R A+V+EW+ P A HWLAYA+ Sbjct: 645 GPSAGFLGSGKPETTAMRGGRGRPWRQRPDLKIWTERAAQVAEWNHQPMVALQHWLAYAQ 704 Query: 416 LTNDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLLVAQYENVGQPERAAA 475 T D+ AW NV+R+A E AL+HK +P D K ++ +VA YE +G+P A Sbjct: 705 ATGDDAAWRNVLRLAPALNEDHAYLAALRHKAGSQPADMKLLDQIVAAYERLGEPAEGLA 764 Query: 476 LLEARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAVLVRQRQEFGPSAANA 535 L++ R N A ER A+L R G+DD A A R ++EFGP A A Sbjct: 765 YLDSVAR-----GPNRQAVLER------YAQLAERAGKDDLAYASYQRLQKEFGPHARYA 813 Query: 536 LMAANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYLGLDEEARQGYDQLLA 595 L AN+LY+R + E AL ++ A A P + +WRT+A+LAR D+ R+ Y QLL Sbjct: 814 LKLANMLYVRDQFELALAAMQTAERTASPTDDLYWRTFAQLARLNQRDDLMREAYRQLLI 873 Query: 596 TNQAAEGDMSNLMVVIQEHEPRAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRF 655 A D+S MV + P A LAE +R+ +AL Y R + Sbjct: 874 GGGAVVDDLSA-MVEFYDASPIDAGRLAELAYRKDGGMIHLQRALYYYTRAGAFHRVEGL 932 Query: 656 LDSITPQQNAALEKYVPYLSVRSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWIL 715 L S+TP Q AA E+ L+ R+ + + +A A D+R A++L ++V+A ++W L Sbjct: 933 LASLTPAQRAAAEQSAGVLAARAEYYRQNGQWAAAMRDLRRAVALPDAGSDVKAALLWSL 992 Query: 716 IATRDTELLNRALTLWAADAENAPQLWGPFAAANISLNRQNVALHWFRKSGFP-QNDYLW 774 I T L RAL W +AEN P WG +AAA + L N+AL + + G +ND LW Sbjct: 993 IDAGQTSELKRALARWRGEAENDPAYWGAYAAAGLQLADANLALRFLGRQGKSMRNDPLW 1052 Query: 775 LLSYAEALDASGQPDLA-------WRIRRRAWI---ELRDPARLR-----NIPPAQLRE- 818 LL+YA+A + +GQ ++A WR+ R + ++R P R P L + Sbjct: 1053 LLAYADAREMAGQAEVAWRLRREAWRLLWRGEVAGAKVRTPGERRAAASDEAEPVPLEDG 1112 Query: 819 ----WRDRLAALAPLFMPADASNKVMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAA 874 R R A LA F P D + +++ LL D + A + L D+ Sbjct: 1113 ARAELRARRATLAQTFGPGDLAQRLLIELLRDDRRETRAAREGGRAAIAGSELGDLDVLP 1172 Query: 875 RSDARQHAQDQDVSARLMDGPAALFAPTGDTGQRPRDDARLSASARELALAYAMNQGDSD 934 A + + D +SA A+E AL +A++Q +D Sbjct: 1173 PEPPESPAASRKATRA--------------------SDQLVSAIAKEAALGWALSQEAND 1212 Query: 935 LARTWLATRFATQLDKPLWGELAMALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRV 994 LAR WL ++ +P + E+++AL D Q LNRLLD+ D LP+ RI+A + R+ Sbjct: 1213 LARAWLLQQYTRGAVRPAYAEISIALAERDLQTLNRLLDDAPDRLPLAARIDANAMTDRL 1272 Query: 995 PLAQTLAFDQLQRLPGDDELHARLTGLVTDDPAKFSVGYTATREFPLATKLFTLSSGVNL 1054 AQ LAFD L P + +LH R + + T ++ PL + ++G L Sbjct: 1273 GEAQRLAFDGLATAPDEPQLHQRAEETLLANAQALEPRETWYKQAPLTYFESSAAAGTRL 1332 Query: 1055 TPGTRLDFGYIERRQSVDDSTLLGDVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFN 1114 T + +R Q + LL VPA DR + + R ++ + RQ + SF Sbjct: 1333 TDHYSMLLRATQRNQRSINDLLLTGVPAQDRSVDWISQYRTQDTQWKGTVGWRQGLASFT 1392 Query: 1115 GLRLEFSRQLTPKLTLSGNGGINLSATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGG 1174 RL+ T + + G N A+++ +RVG +D + N +L++ +Y+R Sbjct: 1393 TFRLDGLLGQTGPVVTELSVGRNQPASETPQLRVGGVKDVVTIGGNWRLTQRQYVRARME 1452 Query: 1175 LQHYASQSGTSLGRGRTLNAEVGTHFRVEYPNLTLRAFVNDAKFTDYGNSDSLIARLVPV 1234 + Q + LG G + E+G FRVEYP+ T+R A+++ G +L+ RL+P Sbjct: 1453 GDRFYGQDRSFLGSGTVFDGEIGHRFRVEYPDYTIRLTGTYARYSASGAPGALLGRLLPA 1512 Query: 1235 GTDPASFRYMPLDSRSWGAALGAGTVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIA 1294 G A+ +++P +G G GT + Y RAWRP+ + GM + GWG ++ G A Sbjct: 1513 GVPMAAEQFVPRSFAQYGLLFGFGTDYLDRYARAWRPFLDAGMLHDNREGWGVQVQLGAA 1572 Query: 1295 GSVVGQDVLS--IGAQSTAATPNNPQRGFELNVLYRWFY 1331 GSV+G D L+ IG S +P E+ + YRW Y Sbjct: 1573 GSVLGNDHLALYIGHASITRAGTSPMT--EIGLRYRWLY 1609 >ref|YP_586292.1| hypothetical protein Rmet_4156 [Cupriavidus metallidurans CH34] gb|ABF11023.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 1368 Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust. Identities = 419/1401 (29%), Positives = 650/1401 (46%), Gaps = 120/1401 (8%) Query: 2 FALVYPKVSLQQRLEVANASGRG-DQLTIEYLKVFLKAKPGNTALRAELVKQMIDLGQFA 60 AL++P+ +L++RL GR D LT+ YL+ + + P +T + L +Q G+ Sbjct: 17 LALMFPRETLRERLL---GQGRAVDGLTVAYLEAWSRVAPNDTNFMSVLAEQYARSGRLD 73 Query: 61 EARQQLAFL--QMGTDPAARLAAAWLEYRIRQQEAFALPATSPERTRLLAELRIQLQQLM 118 +A L + G D ++ +E I QQ A+A S ER LA + L+ Sbjct: 74 DAETMLERMLAVKGQDLTGQILRTRIE--ITQQRAYAAQPDSAERAERLAMMDGLLKDAT 131 Query: 119 TYPLSAQQWLGLSQDALA-----LGDVEAARVAFERLLAERSTRDLPYGEAVRLGQQSLG 173 T P + W LA +G+ AA V R L+ R ++ + +L +L Sbjct: 132 T-PEMLRAWSVADLQTLATQSRQVGNAAAA-VKLFRELSVRDPANVDFYNR-QLAGIALA 188 Query: 174 MGDYRSSASFYLLAMQHAGSLEARRDNFITALRNLQAGGLYQEALEVADANLGPLANDKA 233 G+YR SA A A +L +R F+ AL+ LQAG L EAL A+ + G L +D Sbjct: 189 GGNYRDSARALFEAQARAKNLYEQRTLFLQALQTLQAGNLLDEALAEAERHGGKLLDDAE 248 Query: 234 TLLFLTRLAQAANRPEAAERYVRQLLQLSMGRAAATLARAGQGSAALATVHFQQMSEFTR 293 L +LTRLA AAN+P+ A +YV +LL+LS R ++ Q + A + +++S+ Sbjct: 249 VLRYLTRLALAANKPDIAAKYVERLLKLSANRPT----KSTQLAQAERQRNLRRVSDTEP 304 Query: 294 SLRLTQALLQQPQQPHQLQQRMQMAMRQARVIRVAAADPSQPPA--------AEVNASRE 345 L L P +Q + +R+ + A+ PA A+ A E Sbjct: 305 WLARGVVFLDGPHGLALREQVGEFGLRRVAAEAIPASGVVTKPATRDITQAEAQETAKSE 364 Query: 346 LARL-----PFDDEIYTLAYNVFLGNRNLTDARLLAQSAVRQRPDDPAWRKRLAEVSEWS 400 +A F+ + Y LAY VFL L A+ +AQ+AV + P+D WR+RLA+V+EW+ Sbjct: 365 VATAVANGKTFNPDDYDLAYRVFLAAGKLDQAQRVAQTAVDKLPNDAVWRERLAQVAEWN 424 Query: 401 GVPEQATPHWLAYARLTNDEGAWDNVMRIAAGTFEQDILTEALQHKMQVEPGDPKWVNLL 460 P A WL YA+ TNDE AW+NVMR+A G + AL+H+ GD K ++ + Sbjct: 425 RQPMVALQSWLKYAQETNDERAWNNVMRLAPGLNDDRAYLAALRHR--AAGGDLKTIDEV 482 Query: 461 VAQYENVGQPERAAALLEARLRANANANANANAATERNGEMDALAKLYLRMGRDDDANAV 520 VA YE +G+PE A L+ AN N ERN E L R G+DD A + Sbjct: 483 VAAYERLGEPEAGMAFLDG--LANG---PNGRQVMERNAE------LAERAGKDDRAFEL 531 Query: 521 LVRQRQEFGPSAANALMAANLLYLRGRGEQALELLRQAAPVAPPGNADFWRTYAELARYL 580 + + FG AL AN+L++RGR +QA++ + A A + +WRTY +LAR Sbjct: 532 YGQLEKRFGARPLYALKRANILFVRGRLDQAMDAMLPARDKAGTQDLLYWRTYTQLARLT 591 Query: 581 GLDEEARQGYDQLLATNQAAEGDMS----------NLMVVIQEHE--------------P 616 D+ ++GY Q++ + + D + + +++ E P Sbjct: 592 QRDDLLKEGYRQMMISMAKSHDDHCMAMPPGAARNDCLAEVRDTEDDDFANLIEYYDRWP 651 Query: 617 RAAAALAEFGFRRTSVANFAVQALTYRMRLNDLDGGQRFLDSITPQQNAALEKYVPYLSV 676 A +AE G+R+ + A+ Y R + ++ L S+TP+Q E +L Sbjct: 652 IDAGRIAEAGWRKNGKLDELQLAMYYYTRAHAYIRIEQMLASLTPEQTRQAESSAGFLMR 711 Query: 677 RSAFRQMKHDYAGARADMRLALSLSPRSAEVRAEMIWILI-ATRDTELLNRALTLWAADA 735 R+ + + ++ A AD+R A+ + +E ++W L+ DTE+ L L +A Sbjct: 712 RAEYWRATGNHERALADLRHAIGQADADSETYGALLWALVDMGTDTEVRAVMLRL-KPEA 770 Query: 736 ENAPQLWGPFAAANISLNRQNVALHWFRKSGFPQN-DYLWLLSYAEALDASGQPDLAWRI 794 EN P LWG +AA + ALH+ RK ++ D LWL A+A +A GQ DLAWRI Sbjct: 771 ENDPSLWGAYAAGAMRFQDGRTALHFLRKMQRGKSADPLWLGVTADACEAIGQTDLAWRI 830 Query: 795 RRRAWIELRDPARLRNIPPAQLRE-----------------------WRDRLAALAPLFM 831 RR AW+EL R + A+ E R ++ AL +F Sbjct: 831 RREAWVELH---RTWAVGGAKWAEESAGDEYADEDEEDAQGRPARSDLRRQMIALGQIFA 887 Query: 832 PADASNKVMRALLDSDVTRLVRSDAAPPPADGPALLKDMQAAARSDARQHAQDQDVSARL 891 AD S ++ +L D + AAP P+ L ++ + Sbjct: 888 SADVSRGLVVEMLRRDRESVAARQAAPSDPKSPSQLGNVPGLS----------------- 930 Query: 892 MDGPAALFAPTGDTGQRPRDDARLSASARELALAYAMNQGDSDLARTWLATRFATQLDKP 951 P + P + R A+L+A++RE+ALA+AM+ ++LAR WLA ++A +L +P Sbjct: 931 ---PLEVTPPPALVERERRRQAQLTAASREVALAWAMSSESNELARAWLARQYAERLQRP 987 Query: 952 LWGELAMALGNDDRQGLNRLLDNLADWLPMYDRIEAARVAGRVPLAQTLAFDQLQRLPGD 1011 + E+A+AL ++D L+R+++ A +P+ +IE R R+ AQT AF+ + D Sbjct: 988 AYAEIAIALDDNDMDKLDRIMERKAGKVPVLSQIEVNRQLDRLAAAQTQAFETQELARTD 1047 Query: 1012 DELHARLTGLVTDDPAKFSVGYTATREFPLATKLFTLSSGVNLTPGTRLDFGYIERRQSV 1071 D L L + + + R+ PL ++L+ G L G L+ + R Q Sbjct: 1048 DSLQQTLQDALLFNAQAIEPRASYQRQNPLEFYEYSLAGGARLWDGYALNLRGVFRDQRS 1107 Query: 1072 DDSTLLGDVPAVDRLYSFTLRRRIEEGFVSAALQHRQAMTSFNGLRLEFSRQLTPKLTLS 1131 D T L +VP DR L R + + R + SF RL + L +++ + Sbjct: 1108 TDRTALDNVPGSDRRAELALTYRDTQKLWLLGVGRRDGLQSFTTARLTGAWNLEDRVSFT 1167 Query: 1132 GNGGINLSATDSAFMRVGAKRDGGELNLNVQLSRTEYLRLGGGLQHYASQSGTSLGRGRT 1191 G G N A +SA +RVG +D EL +L E++R + Q +SLG G Sbjct: 1168 GRLGYNQQADESAQLRVGGMKDLVELGATWRLGLREFIRGRIEYDRFYGQDRSSLGHGMV 1227 Query: 1192 LNAEVGTHFRVEYPNLTLRAFVNDAKF-TDYGNSDSLIARLVPVGTDPASFRYMPLDSRS 1250 + E G R +YP+ T+R + T+ G + RLVP G D YMP + Sbjct: 1228 YDVEAGYRIRTQYPDYTVRIVGTRGIYNTNGGALTPTMQRLVPAGGDATPAFYMPQNFTQ 1287 Query: 1251 WGAALGAGTVVENAYTRAWRPYAEFGMTRTSDIGWGRNLRAGIAGSVVGQDVLSIGAQST 1310 G G GT + + YTR WRP+ + G S G + G+AGSV G D +S+ Sbjct: 1288 AGVLFGFGTELLDDYTRKWRPFLDVGALYDSRAGHNFRGQLGMAGSVFGNDHMSMYVLHE 1347 Query: 1311 AATPNNPQRGFELNVLYRWFY 1331 A+ N E+ + YRW Y Sbjct: 1348 TASRNGGTPLTEVGLRYRWLY 1368