BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0255.p (471 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777622.1| transmembrane protein [Herbaspirillum serope... 954 0.0 ref|ZP_08273147.1| putative transmembrane protein [Oxalobacterac... 457 e-126 emb|CCA84621.1| putative polysaccharide transport system compone... 356 5e-96 ref|YP_001900037.1| hypothetical protein Rpic_2471 [Ralstonia pi... 355 1e-95 ref|YP_003751810.1| polysaccharide transport system component tr... 355 1e-95 ref|YP_586294.1| hypothetical protein Rmet_4158 [Cupriavidus met... 352 6e-95 ref|ZP_00946560.1| Hypothetical Protein RRSL_00608 [Ralstonia so... 347 2e-93 ref|YP_003745052.1| polysaccharide transporter component transme... 345 8e-93 gb|AEG68464.1| polysaccharide transport system component protein... 343 3e-92 emb|CBJ37311.1| putative polysaccharide transport system compone... 341 2e-91 >ref|YP_003777622.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65714.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 491 Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/471 (100%), Positives = 471/471 (100%) Query: 1 MSTALTAGQKRQKFWSRFFTRFDTDSGSPRKAVLRIIETVALVLAALLFAHWVAPEDPMG 60 MSTALTAGQKRQKFWSRFFTRFDTDSGSPRKAVLRIIETVALVLAALLFAHWVAPEDPMG Sbjct: 21 MSTALTAGQKRQKFWSRFFTRFDTDSGSPRKAVLRIIETVALVLAALLFAHWVAPEDPMG 80 Query: 61 IRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGWYLLVHGHQASEADAVAAAAQAFPQS 120 IRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGWYLLVHGHQASEADAVAAAAQAFPQS Sbjct: 81 IRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGWYLLVHGHQASEADAVAAAAQAFPQS 140 Query: 121 YFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDERLTMLTKNHFLLRLSHERLEQDLLS 180 YFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDERLTMLTKNHFLLRLSHERLEQDLLS Sbjct: 141 YFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDERLTMLTKNHFLLRLSHERLEQDLLS 200 Query: 181 KPLTLRESLDRMRALTLTQILLDPSRMPAPDAFLQILAQSCQVASAAVYVCDAAGHITPE 240 KPLTLRESLDRMRALTLTQILLDPSRMPAPDAFLQILAQSCQVASAAVYVCDAAGHITPE Sbjct: 201 KPLTLRESLDRMRALTLTQILLDPSRMPAPDAFLQILAQSCQVASAAVYVCDAAGHITPE 260 Query: 241 PAASVGKVSELAADDALVRYCLAQRKLGHIQTESLNQNLRNQSRYLVCAPLLNFDGRLFG 300 PAASVGKVSELAADDALVRYCLAQRKLGHIQTESLNQNLRNQSRYLVCAPLLNFDGRLFG Sbjct: 261 PAASVGKVSELAADDALVRYCLAQRKLGHIQTESLNQNLRNQSRYLVCAPLLNFDGRLFG 320 Query: 301 LLVVEQLPFVALNEDTLQLMSVLIDYYADGIEVGGTARSILQQLPTCPPELAVDVVRLHR 360 LLVVEQLPFVALNEDTLQLMSVLIDYYADGIEVGGTARSILQQLPTCPPELAVDVVRLHR Sbjct: 321 LLVVEQLPFVALNEDTLQLMSVLIDYYADGIEVGGTARSILQQLPTCPPELAVDVVRLHR 380 Query: 361 LKRSTDIDSSLVALVFGDDEISRDMFDQIRRLKRAADVVWTYKAGGRNVLMTLLPLAGAA 420 LKRSTDIDSSLVALVFGDDEISRDMFDQIRRLKRAADVVWTYKAGGRNVLMTLLPLAGAA Sbjct: 381 LKRSTDIDSSLVALVFGDDEISRDMFDQIRRLKRAADVVWTYKAGGRNVLMTLLPLAGAA 440 Query: 421 AVDGYLMRVEAASQAQFGAKSLANYAAIHTAAIGGDEPSRLLPNLVERCAA 471 AVDGYLMRVEAASQAQFGAKSLANYAAIHTAAIGGDEPSRLLPNLVERCAA Sbjct: 441 AVDGYLMRVEAASQAQFGAKSLANYAAIHTAAIGGDEPSRLLPNLVERCAA 491 >ref|ZP_08273147.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33374.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 471 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/440 (52%), Positives = 303/440 (68%), Gaps = 6/440 (1%) Query: 37 IETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGWY 96 +E + L A + W+AP+DP+G+ AQFPWLW+VPA+LAMRYG+ +GV AV T +A Sbjct: 31 LEAIFLCALAFGLSCWIAPQDPLGLGAQFPWLWIVPALLAMRYGTAIGVTAVVTFIALCL 90 Query: 97 LL------VHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAIN 150 LL + ++ A A + A Q FP+++FLGGLVLTL+CGQF+++W+AR+RRLRA+N Sbjct: 91 LLPELAAYLPWSRSIVASATSLAGQEFPKAFFLGGLVLTLICGQFSDIWSARTRRLRAVN 150 Query: 151 AYLDERLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTLTQILLDPSRMPAP 210 AYLDERL LTKNHFLLRLSHERLEQDLL+KPLTLRE+L R+R LT +Q DP +P Sbjct: 151 AYLDERLNTLTKNHFLLRLSHERLEQDLLAKPLTLRETLARLRELTASQQAADPVELPGA 210 Query: 211 DAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLGHI 270 F+Q+L QSCQ+ AA++ P A +G+ L DD LVRYC+AQ +L H+ Sbjct: 211 REFIQLLGQSCQLEIAALHGVTGTDRYAGMPTAVLGEPGVLDQDDPLVRYCIAQGRLAHV 270 Query: 271 QTESLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYADG 330 QT + R+ SRYL+CAPLL GLLVVE+LPF ALN+D LQL+SVLI YYADG Sbjct: 271 QTTDITPADRSASRYLICAPLLPSGSAPVGLLVVEKLPFFALNDDALQLLSVLIGYYADG 330 Query: 331 IEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQIR 390 + +G R++L +P CP ++A+D++RL R++ I++SLVALVFG DE S D F+Q++ Sbjct: 331 VRLGHAVRAVLATVPDCPADMALDLMRLQRIRVEAGIETSLVALVFGKDEESLDRFEQVK 390 Query: 391 RLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAIHT 450 RLKR D+ W L+TLLPLA AAAVDGYL+R+E+A Q QFG +++ HT Sbjct: 391 RLKRGVDLSWELAGNSHVALITLLPLASAAAVDGYLLRIESALQQQFGGGFVSSQITTHT 450 Query: 451 AAIGGDEPSRLLPNLVERCA 470 A +G + L LV RCA Sbjct: 451 ARLGHADAGETLLGLVRRCA 470 >emb|CCA84621.1| putative polysaccharide transport system component transmembrane protein (ragD) [Ralstonia syzygii R24] Length = 483 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 186/441 (42%), Positives = 267/441 (60%), Gaps = 23/441 (5%) Query: 36 IIETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGW 95 I+ET+ + ++ P++P+ + FPW+WLVP ILA+RYG+ LG VA M+ W Sbjct: 55 ILETLGATIVSIGIVWLFEPDNPLLLGHGFPWVWLVPLILALRYGTLLGAVAALVMVGAW 114 Query: 96 YLLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDE 155 ++ AFP+ YFLGGL++ L+ GQ+ ++W AR R R +N YL++ Sbjct: 115 WVFY-------------GQGAFPRMYFLGGLMMMLVGGQYGDIWGARLSRARIVNGYLND 161 Query: 156 RLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTLT-------QILLDPSRMP 208 RL LTKNHFLLRLSHERLE DLL+KP TLR++L ++R L L D +++P Sbjct: 162 RLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNLALAAREHASGDDAPDVAQLP 221 Query: 209 APDAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLG 268 FLQ AQ+CQ+ AA+ V + P P A VG E+ ADD L+R+C+ LG Sbjct: 222 GATQFLQWAAQACQLEVAAM-VRVIGNRVDPAPVARVGTPFEIVADDPLIRHCIDTHTLG 280 Query: 269 HIQTESLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYA 328 H Q L + SRY+ CAP+L+ L G++VV+Q+PF++L+ + LQ + VL+ YYA Sbjct: 281 HPQAPELRHE--DGSRYVACAPILSGADELIGIVVVQQMPFLSLSYENLQFLLVLLGYYA 338 Query: 329 DGIEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQ 388 DG+ + IL +P P E A+D+ RL RL R TDIDSS+VAL+FG DE S +F+Q Sbjct: 339 DGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTDIDSSVVALIFGHDEASDALFEQ 398 Query: 389 IRRLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAI 448 + R +RA DVVW + R ++TL+PL+GA AV YL+R+E + +AQFG A + ++ Sbjct: 399 VVRSRRALDVVWQVRGSARRAIVTLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEAAHISV 458 Query: 449 HTAAIGGDEPSRLLPNLVERC 469 T + G+ P L + RC Sbjct: 459 QTLHVTGEHPGEALSRFLARC 479 >ref|YP_001900037.1| hypothetical protein Rpic_2471 [Ralstonia pickettii 12J] ref|ZP_07676408.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gb|ACD27605.1| putative transmembrane protein [Ralstonia pickettii 12J] gb|EFP64980.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 491 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 188/442 (42%), Positives = 270/442 (61%), Gaps = 19/442 (4%) Query: 37 IETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGWY 96 +ET+ V+AA+ AP++P+ + FPW+WLVP ILA+RYG+ LG +A ++ W Sbjct: 56 LETLGAVVAAIGIVWLFAPDNPLLLGYGFPWIWLVPLILALRYGTLLGALAALVVLGAWA 115 Query: 97 LLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDER 156 + +G AAA +FP+ YFLGGL+L L+ GQ+ ++W AR R R +N YL++R Sbjct: 116 VF-YGQ--------TAAAGSFPRMYFLGGLMLVLIGGQYGDIWGARLSRARTVNGYLNDR 166 Query: 157 LTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTLT-------QILLDPSRMPA 209 L LTKNHFLLRLSHERLE DLL+KP TLR++L ++R + L + D +++P Sbjct: 167 LAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNIALAAREHGTAENAPDVAQLPG 226 Query: 210 PDAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLGH 269 + FLQ AQ+CQ+ AA+ V I EP A VG ++ ADD L+R+C+ LGH Sbjct: 227 AEPFLQWTAQACQLEVAAM-VRVTGNRIDTEPVARVGTPFDIVADDPLIRHCIDTHTLGH 285 Query: 270 IQTESLNQ--NLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYY 327 Q L N SRY+ CAP+L+ L GL+VV Q+PF++L+ + LQ + VL+ YY Sbjct: 286 PQAPELRNVNNPEESSRYVACAPVLSGADELIGLVVVHQMPFLSLSYENLQFLLVLLGYY 345 Query: 328 ADGIEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFD 387 ADG+ + IL +P P E A+D+ RL RL R T IDSS+VAL+F +E S +F+ Sbjct: 346 ADGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFDQEEASDALFE 405 Query: 388 QIRRLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAA 447 + R +RA DVVW GR ++TL+PL+GA AV YL+R+E + +AQFG + + Sbjct: 406 SVVRSRRALDVVWQASGKGRRAIITLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEGGHIS 465 Query: 448 IHTAAIGGDEPSRLLPNLVERC 469 + T + G+ P L + RC Sbjct: 466 VQTLHVTGEHPGEALQRFLSRC 487 >ref|YP_003751810.1| polysaccharide transport system component transmembrane protein (ragD) [Ralstonia solanacearum PSI07] emb|CBJ50513.1| putative polysaccharide transport system component transmembrane protein (ragD) [Ralstonia solanacearum PSI07] Length = 483 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 186/441 (42%), Positives = 267/441 (60%), Gaps = 23/441 (5%) Query: 36 IIETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGW 95 I+ET+ + A+ P++P+ + FPW+WLVP ILA+RYG+ LG VA M+ W Sbjct: 55 ILETLGATIVAIGIVWLFEPDNPLLLGHGFPWVWLVPLILALRYGTLLGAVAALVMVGAW 114 Query: 96 YLLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDE 155 ++ AFP+ YFLGGL++ L+ GQ+ ++W AR R R +N YL++ Sbjct: 115 WVFY-------------GQGAFPRMYFLGGLMMMLVGGQYGDIWGARLSRARIVNGYLND 161 Query: 156 RLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTLT-------QILLDPSRMP 208 RL LTKNHFLLRLSHERLE DLL+KP TLR++L ++R L L D +++P Sbjct: 162 RLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNLALAAREHASGDDAPDVAQLP 221 Query: 209 APDAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLG 268 FLQ +Q+CQ+ AA+ V A + P P A VG E+ ADD L+R+C+ LG Sbjct: 222 GATQFLQWASQACQLEVAAM-VRVAGSRVDPAPVARVGTPFEIVADDPLIRHCIDTHTLG 280 Query: 269 HIQTESLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYA 328 H Q L + SRY+ CAP+L+ L G++VV+Q+PF++L+ + LQ + VL+ YYA Sbjct: 281 HPQAPELRHE--DGSRYVACAPILSGADELIGIVVVQQMPFLSLSYENLQFLLVLLGYYA 338 Query: 329 DGIEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQ 388 DG+ + IL +P P E A+D+ RL RL R T IDSS+VAL+FG DE S +F+Q Sbjct: 339 DGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFGHDEASDALFEQ 398 Query: 389 IRRLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAI 448 + R +RA DVVW + R ++TL+PL+GA AV YL+R+E + +AQFG A + ++ Sbjct: 399 VVRSRRALDVVWQVRGSARRAIVTLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEAAHISV 458 Query: 449 HTAAIGGDEPSRLLPNLVERC 469 T + G+ P L + RC Sbjct: 459 QTLHVTGEHPGEALSRFLARC 479 >ref|YP_586294.1| hypothetical protein Rmet_4158 [Cupriavidus metallidurans CH34] gb|ABF11025.1| Conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 487 Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 181/436 (41%), Positives = 266/436 (61%), Gaps = 14/436 (3%) Query: 36 IIETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGW 95 +IE + ++ AA+ V P++P+ + FPW WL+P ILA+RYG+ +GV AV ++ GW Sbjct: 34 VIEMIVIMAAAMGITWLVLPQNPLLLGMGFPWAWLLPVILALRYGTLVGVGAVLMLLGGW 93 Query: 96 YLLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDE 155 + D + A + AFP+ +F+GGL+L L+ GQF +VWN R R RA+N YLDE Sbjct: 94 FFF---------DEIGAHSGAFPRMFFMGGLLLVLVAGQFGDVWNTRLARARAVNRYLDE 144 Query: 156 RLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTLTQILLDPSRMPAPDA--F 213 RL LTKNH+LLR+SH RLE DLL++P TLR++L ++RA+ L + P A Sbjct: 145 RLAALTKNHYLLRISHARLENDLLARPTTLRDTLSQLRAVALQDAMNGGKSGPLAGAQPM 204 Query: 214 LQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLGHIQTE 273 LQ++AQ+CQV AA+Y CD + P AS+G E+ +D LVR+CL R L H+++ Sbjct: 205 LQVVAQACQVEGAALYACDGE-RVVPNAVASIGPAFEIDVNDPLVRHCLETRALAHLRST 263 Query: 274 SLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYADGIEV 333 L Q+ Q+RY+ AP+L RL G+LVVE++PF++L + LQ++ VL+ YYADG+E Sbjct: 264 GLQQD--AQTRYVAVAPVLAGSDRLIGVLVVERMPFLSLTYENLQMLMVLMGYYADGVEH 321 Query: 334 GGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQIRRLK 393 I + P P A+D RL RL+ T I SS+VALVF DE +F+Q+ R + Sbjct: 322 ARATHGIQEMAPAIPYAFALDYARLSRLRHETGIQSSVVALVFDLDEARDALFEQVVRSR 381 Query: 394 RAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAIHTAAI 453 RA DV W + ++TL+PL+ A AV YL+R+E +AQFG + + ++T ++ Sbjct: 382 RALDVAWPVRNAHHRAMLTLMPLSDAQAVSAYLVRIEDMLRAQFGTDFSSAHIGVYTLSV 441 Query: 454 GGDEPSRLLPNLVERC 469 + L L+ RC Sbjct: 442 PAEGAEEALMRLLHRC 457 >ref|ZP_00946560.1| Hypothetical Protein RRSL_00608 [Ralstonia solanacearum UW551] ref|YP_002260262.1| polysaccharide transport system component protein [Ralstonia solanacearum IPO1609] gb|EAP70963.1| Hypothetical Protein RRSL_00608 [Ralstonia solanacearum UW551] emb|CAQ35864.1| polysaccharide transport system component protein [Ralstonia solanacearum MolK2] emb|CAQ62197.1| polysaccharide transport system component protein [Ralstonia solanacearum IPO1609] Length = 483 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 186/441 (42%), Positives = 268/441 (60%), Gaps = 23/441 (5%) Query: 36 IIETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGW 95 I+ET+ + A+ P +P+ + FPW+WLVP ILA+RYG+ LG VA ++ W Sbjct: 55 ILETIGATMVAIGIVWLFEPGNPLLLGHGFPWIWLVPLILALRYGTLLGAVAALVVVGAW 114 Query: 96 YLLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDE 155 ++ FP+ YFLGGL++ L+ GQ+ ++W AR R R +N YL++ Sbjct: 115 WVFY-------------GQGVFPRMYFLGGLMMMLVGGQYGDIWGARLSRARIVNGYLND 161 Query: 156 RLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTL-------TQILLDPSRMP 208 RL LTKNHFLLRLSHERLE DLL+KP TLR++L ++R L L + D +++P Sbjct: 162 RLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNLALAAREHASSDDAPDVAQLP 221 Query: 209 APDAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLG 268 FLQ AQ+CQ+ AA+ V + PEP A VG E+AADD L+++C+ LG Sbjct: 222 GATQFLQWAAQACQLEVAAM-VRVTGNRVDPEPVARVGTPFEIAADDPLIQHCIDTHTLG 280 Query: 269 HIQTESLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYA 328 H Q L + SRY+ CAP+L+ L G++VV+Q+PF++L+ + LQ + VL+ YYA Sbjct: 281 HPQAPELRHE--DGSRYVACAPVLSGADELIGIVVVQQMPFLSLSYENLQFLLVLLGYYA 338 Query: 329 DGIEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQ 388 DG+ + IL +P P E A+D+ RL RL R T IDSS+VAL+FG DE S +F+Q Sbjct: 339 DGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFGHDEASDALFEQ 398 Query: 389 IRRLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAI 448 + R +RA DVVW + G R ++TL+PL+GA AV YL+R+E + +AQFG A + ++ Sbjct: 399 VVRSRRALDVVWQVRGGARRAIVTLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEAAHISV 458 Query: 449 HTAAIGGDEPSRLLPNLVERC 469 T + G+ P L + RC Sbjct: 459 QTLHVTGEHPGEALARFIARC 479 >ref|YP_003745052.1| polysaccharide transporter component transmembrane protein (ragd) [Ralstonia solanacearum CFBP2957] emb|CBJ42425.1| putative polysaccharide transport system component transmembrane protein (ragD) [Ralstonia solanacearum CFBP2957] Length = 483 Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 186/441 (42%), Positives = 267/441 (60%), Gaps = 23/441 (5%) Query: 36 IIETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGW 95 I+ET+ + A+ P +P+ + FPW+WLVP ILA+RYG+ LG VA ++ W Sbjct: 55 ILETIGATMVAIGIVWLFEPGNPLLLGHGFPWIWLVPLILALRYGTLLGAVAALVVVGAW 114 Query: 96 YLLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDE 155 ++ FP+ YFLGGL++ L+ GQ+ ++W AR R R +N YL++ Sbjct: 115 WVFY-------------GQGVFPRMYFLGGLMMMLVGGQYGDIWGARLSRARIVNGYLND 161 Query: 156 RLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTL-------TQILLDPSRMP 208 RL LTKNHFLLRLSHERLE DLL+KP TLR++L ++R L L + D +++P Sbjct: 162 RLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNLALAAREHASSDDAPDVAQLP 221 Query: 209 APDAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLG 268 FLQ AQ+CQ+ AA+ V + PEP A VG E+AADD LV++C+ LG Sbjct: 222 GATQFLQWAAQACQLEVAAM-VRVTGNRVDPEPVARVGTPFEIAADDPLVQHCIDTHTLG 280 Query: 269 HIQTESLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYA 328 H Q L + SRY+ CAP+L+ L G++VV+Q+PF++L+ + LQ + VL+ YYA Sbjct: 281 HPQAPELRHE--DGSRYVACAPVLSGADELIGIVVVQQMPFLSLSYENLQFLLVLLGYYA 338 Query: 329 DGIEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQ 388 DG+ + IL +P P E A+D+ RL RL R T IDSS+VAL+FG DE S +F+Q Sbjct: 339 DGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFGHDEASDALFEQ 398 Query: 389 IRRLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAI 448 + R +RA DVVW + R ++TL+PL+GA AV YL+R+E + +AQFG A + ++ Sbjct: 399 VVRSRRALDVVWQVRGSARRAIVTLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEAAHISV 458 Query: 449 HTAAIGGDEPSRLLPNLVERC 469 T + G+ P L + RC Sbjct: 459 QTLHVTGEHPGEALARFIARC 479 >gb|AEG68464.1| polysaccharide transport system component protein [Ralstonia solanacearum Po82] Length = 483 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 184/441 (41%), Positives = 267/441 (60%), Gaps = 23/441 (5%) Query: 36 IIETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGW 95 I+ET+ + A+ P +P+ + FPW+WLVP ILA+RYG+ LG VA ++ W Sbjct: 55 ILETIGATMVAIGVVWLFEPGNPLLLGHGFPWIWLVPLILALRYGTLLGAVAALVVVGAW 114 Query: 96 YLLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDE 155 ++ FP+ YFLGGL++ L+ GQ+ ++W AR R R +N YL++ Sbjct: 115 WVFY-------------GQGVFPRMYFLGGLMMMLVGGQYGDIWGARLSRARIVNGYLND 161 Query: 156 RLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTL-------TQILLDPSRMP 208 RL LTKNHFLLRLSHERLE DLL+KP TLR++L ++R L L + D +++P Sbjct: 162 RLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRNLALAAREHASSDDAPDVAQLP 221 Query: 209 APDAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLG 268 FLQ A++CQ+ AA+ V + PEP A VG E+AADD L+++C+ LG Sbjct: 222 GATQFLQWAARACQLEVAAM-VRVTGNRVDPEPVARVGTPFEIAADDPLIQHCIDTHTLG 280 Query: 269 HIQTESLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYA 328 H Q L + SRY+ CAP+L+ L G++VV+Q+PF++L+ + LQ + VL+ YYA Sbjct: 281 HPQAPELRHE--DGSRYVACAPVLSGADELIGIVVVQQMPFLSLSYENLQFLLVLLGYYA 338 Query: 329 DGIEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQ 388 DG+ + IL +P P E A+D+ RL RL R T IDSS+VAL+FG DE S +F+ Sbjct: 339 DGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFGHDEASDALFEH 398 Query: 389 IRRLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAI 448 + R +RA DVVW + G R ++TL+PL+GA AV YL+R+E + +AQFG A + ++ Sbjct: 399 VVRSRRALDVVWQVRGGARRAIVTLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEAAHISV 458 Query: 449 HTAAIGGDEPSRLLPNLVERC 469 T + G+ P L + RC Sbjct: 459 QTLHVTGEHPGEALARFIARC 479 >emb|CBJ37311.1| putative polysaccharide transport system component transmembrane protein (ragD) [Ralstonia solanacearum CMR15] Length = 478 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 184/441 (41%), Positives = 264/441 (59%), Gaps = 23/441 (5%) Query: 36 IIETVALVLAALLFAHWVAPEDPMGIRAQFPWLWLVPAILAMRYGSTLGVVAVATMMAGW 95 I+ET+ + A+ P +P+ + FPW+WLVP ILA+RYG+ LG VA ++ W Sbjct: 50 ILETIGATMVAIGIVWLFEPNNPLLLGHGFPWIWLVPLILALRYGTLLGAVAALVVVGAW 109 Query: 96 YLLVHGHQASEADAVAAAAQAFPQSYFLGGLVLTLLCGQFAEVWNARSRRLRAINAYLDE 155 ++ FP+ YFLGGL++ L+ GQ+ ++W AR R R +N YL++ Sbjct: 110 WVFY-------------GQGTFPRMYFLGGLMMMLVGGQYGDIWGARLSRARIVNGYLND 156 Query: 156 RLTMLTKNHFLLRLSHERLEQDLLSKPLTLRESLDRMRALTLT-------QILLDPSRMP 208 RL LTKNHFLLRLSHERLE DLL+KP TLR++L ++R+L L D +++P Sbjct: 157 RLAALTKNHFLLRLSHERLENDLLAKPTTLRDTLTQLRSLALAAREHASGDDAPDVAQLP 216 Query: 209 APDAFLQILAQSCQVASAAVYVCDAAGHITPEPAASVGKVSELAADDALVRYCLAQRKLG 268 FLQ AQ+CQ+ AA+ V + PEP A VG E+ ADD L+R+C+ LG Sbjct: 217 GATQFLQWAAQACQLEVAAM-VRVTGNRVDPEPVARVGVPFEVVADDPLIRHCIDTHTLG 275 Query: 269 HIQTESLNQNLRNQSRYLVCAPLLNFDGRLFGLLVVEQLPFVALNEDTLQLMSVLIDYYA 328 H Q L Q + SRY+ CAP+L+ L G++VV+Q+PF++L+ + LQ + VL+ YYA Sbjct: 276 HPQAPELRQE--DGSRYVACAPILSGADELIGVVVVQQMPFLSLSYENLQFLLVLLGYYA 333 Query: 329 DGIEVGGTARSILQQLPTCPPELAVDVVRLHRLKRSTDIDSSLVALVFGDDEISRDMFDQ 388 DG+ + IL +P P E A+D+ RL RL R T IDSS+VAL+FG+DE S +F+ Sbjct: 334 DGVRHLTVSSEILDLVPDAPYEFALDLGRLARLHRDTGIDSSVVALIFGNDEASDALFEH 393 Query: 389 IRRLKRAADVVWTYKAGGRNVLMTLLPLAGAAAVDGYLMRVEAASQAQFGAKSLANYAAI 448 + R +RA DVVW + ++TL+PL+GA AV YL+R+E + +AQFG A + Sbjct: 394 VVRSRRALDVVWQMRGSAGRAIVTLMPLSGAGAVSAYLVRIEDSLRAQFGVDFEAAQVNV 453 Query: 449 HTAAIGGDEPSRLLPNLVERC 469 T + G+ P L + RC Sbjct: 454 QTLYVTGEHPGEALARFIGRC 474