BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0252.p (456 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777619.1| transmembrane protein [Herbaspirillum serope... 905 0.0 ref|ZP_08273150.1| putative transmembrane protein [Oxalobacterac... 694 0.0 ref|YP_002982026.1| hypothetical protein Rpic12D_2075 [Ralstonia... 612 e-173 ref|YP_001900034.1| hypothetical protein Rpic_2468 [Ralstonia pi... 591 e-167 ref|YP_586297.1| hypothetical protein Rmet_4161 [Cupriavidus met... 584 e-165 ref|YP_001861408.1| putative transmembrane protein [Burkholderia... 580 e-163 ref|YP_002008605.1| transmembrane protein [Cupriavidus taiwanens... 577 e-162 ref|YP_004349447.1| Putative transmembrane protein [Burkholderia... 564 e-158 ref|YP_841710.1| hypothetical protein H16_B2198 [Ralstonia eutro... 562 e-158 ref|YP_004682357.1| OmpR family response regulator [Cupriavidus ... 560 e-157 >ref|YP_003777619.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65711.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 456 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/456 (100%), Positives = 456/456 (100%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV Sbjct: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL Sbjct: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL Sbjct: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY Sbjct: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED Sbjct: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS Sbjct: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT Sbjct: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ Sbjct: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 >ref|ZP_08273150.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33377.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 456 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/456 (76%), Positives = 401/456 (87%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRKILKRD+L+SLMQAY+YAA+ISSGPW++SIVGIL+IG+LSY ++ P +IV Sbjct: 1 MAGIGFELRKILKRDNLMSLMQAYTYAAVISSGPWVLSIVGILIIGVLSYAIVLPNMLIV 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVSITYVI+ SLIFTG FQLA TRF ADRLF K+N IL NFHAV+L VTVVGG+ GL Sbjct: 61 QFQVSITYVIAASLIFTGPFQLAFTRFTADRLFEKNNDVILTNFHAVTLAVTVVGGIAGL 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 V FLFP QS +YRLLLLAAF+IM NIWIATIFLSGMKQY+ I W+Y LGYTITV AAL Sbjct: 121 LCVLFLFPEQSVMYRLLLLAAFVIMSNIWIATIFLSGMKQYKEIVWMYLLGYTITVLAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 +RP GLEGLM GFVIGQA+LLM M LILRN+P+ +FIS+EFF+R+ +YP+L+ IGLLY Sbjct: 181 AMRPFGLEGLMAGFVIGQALLLMGMTVLILRNYPAQKFISFEFFERKLMYPTLLCIGLLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL +W+DK +FW+TA+TSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVE Sbjct: 241 NLGVWVDKFVFWFTADTSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YD FY+AVRSG SLE IE+ RNGMVET+RLG+FEIIKIQ IATL+++V GE+ LKWLGIS Sbjct: 301 YDKFYQAVRSGGSLEAIEEARNGMVETIRLGIFEIIKIQTIATLLLIVIGEATLKWLGIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 TLYLPLLYIDVIAA LQVVLLG+LNVFFYLDKRRIVL LC FVVLN+A T +S+QLGP Sbjct: 361 TLYLPLLYIDVIAAGLQVVLLGILNVFFYLDKRRIVLALCATFVVLNLALTLVSVQLGPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 F+G+GFALA+ VVVLAG LLSR L LLEYETFMLQ Sbjct: 421 FFGYGFALALLVVVLAGLALLSRTLGLLEYETFMLQ 456 >ref|YP_002982026.1| hypothetical protein Rpic12D_2075 [Ralstonia pickettii 12D] gb|ACS63354.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 456 Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust. Identities = 304/456 (66%), Positives = 367/456 (80%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+LKRDSLL L++AY+YA +ISSGPWI+SIVGIL+IG+LS + P ++I Sbjct: 1 MAGIGFELRKMLKRDSLLGLLRAYTYAGIISSGPWILSIVGILLIGILSLPFVVPGSLIT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+I++SLI TG QLA TRF +DRLF K + ILPN+HAVSL +T+V G LGL Sbjct: 61 QFQVSVTYLIAVSLILTGPLQLAFTRFTSDRLFEKRDDLILPNYHAVSLVMTLVAGGLGL 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 + F FP QSA+YRLL+LA F++M NIWIA IFLSGMKQY+AI WI+ +GYT+TV AL Sbjct: 121 LVILFAFPQQSAIYRLLMLAGFVVMANIWIAVIFLSGMKQYKAIVWIFLIGYTLTVLLAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 L LGLEGL+ GFV GQ LL+ M ALI RNF RF+S+E FDRR YPSLM IGLLY Sbjct: 181 LFNRLGLEGLLAGFVTGQLCLLIGMAALIYRNFSGRRFLSFEVFDRRFAYPSLMLIGLLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IW+DK MFWY T Q +IGPL ASVIYD+PVFLAYL IIPGMA+FL+R+ETDFVE Sbjct: 241 NLGIWLDKFMFWYAPGTGQQVIGPLNASVIYDIPVFLAYLGIIPGMAVFLVRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY+AVR GASLE IE RN MV+T+R GL+EI+KIQA+A LV+ G S+L+ L IS Sbjct: 301 YDAFYDAVRGGASLEHIEDMRNTMVQTIRAGLYEIVKIQAMAALVLFAVGASVLRALQIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 LYLPLLY+D IAASLQVV LGV+N+FFYLD+RR+VL L AFV LN T I+LQLGP Sbjct: 361 ELYLPLLYVDTIAASLQVVFLGVVNIFFYLDRRRVVLALTAAFVALNGVLTWITLQLGPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 +YG+GFA+++ +VV+A V+L RKL+ LEYETFMLQ Sbjct: 421 WYGYGFAVSLLLVVMASLVILDRKLDRLEYETFMLQ 456 >ref|YP_001900034.1| hypothetical protein Rpic_2468 [Ralstonia pickettii 12J] ref|ZP_07676411.1| membrane protein [Ralstonia sp. 5_7_47FAA] gb|ACD27602.1| putative transmembrane protein [Ralstonia pickettii 12J] gb|EFP64983.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 456 Score = 591 bits (1523), Expect = e-167, Method: Compositional matrix adjust. Identities = 302/456 (66%), Positives = 366/456 (80%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+LKRDSLL L++AY+YA +ISSGPWI+SIVGIL+IG+LS + P ++I Sbjct: 1 MAGIGFELRKMLKRDSLLGLLRAYTYAGIISSGPWILSIVGILLIGILSLPFVVPGSLIT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+I++SLI TG QLA TRF +DRLF K + ILPN+HAVSL +T+V G LGL Sbjct: 61 QFQVSVTYLIAVSLILTGPLQLAFTRFTSDRLFEKRDDLILPNYHAVSLVMTLVAGGLGL 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 + F FP QSA+YRLL+LA F++M NIWIA IFLSGMKQY+AI WI+ +GYT+TV AL Sbjct: 121 LVIVFAFPQQSAIYRLLMLAGFVVMANIWIAVIFLSGMKQYKAIVWIFLVGYTLTVLLAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 L LGLEGL+ GFV GQ LL+ M ALI RNF RF+S+E FD+R YPSLM IGLLY Sbjct: 181 LFNRLGLEGLLLGFVTGQLFLLIGMAALIYRNFSGRRFLSFEVFDKRFAYPSLMLIGLLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IW+DK MFWY T Q +IGPL ASVIYD+PVFLAYL IIPGMA+FL+R+ETDFVE Sbjct: 241 NLGIWLDKFMFWYAPGTGQQVIGPLNASVIYDIPVFLAYLGIIPGMAVFLVRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY AVR GASLE IE RN MV+T+R GL+EI+KIQA+A LV+ G ++L+ L IS Sbjct: 301 YDAFYNAVRGGASLEHIEDMRNTMVQTIRAGLYEIVKIQAMAALVLFAVGAAVLRALQIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 LYLPLLY+D IAASLQVV LGV+N+FFYLD+RR+VL L AFV LN T I+LQLGP Sbjct: 361 ELYLPLLYVDTIAASLQVVFLGVVNIFFYLDRRRVVLALTAAFVALNGVLTWITLQLGPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 +YG+GFA+++ +VV+A V+L RKL+ LEYETFMLQ Sbjct: 421 WYGYGFAVSLLLVVMASLVILDRKLDRLEYETFMLQ 456 >ref|YP_586297.1| hypothetical protein Rmet_4161 [Cupriavidus metallidurans CH34] gb|ABF11028.1| Conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 456 Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust. Identities = 287/456 (62%), Positives = 362/456 (79%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+L+RDSL L+ AY+YA +ISSGPW++SIVGIL+IG+LS + P +I Sbjct: 1 MAGIGFELRKMLRRDSLSGLIGAYAYAGVISSGPWVLSIVGILLIGLLSVGFVIPGMLIT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+I+ SLI TG QL+ TRF +DRLF + + +L N+HAV+L T++ G++GL Sbjct: 61 QFQVSVTYLIACSLILTGPMQLSFTRFTSDRLFERRDDLVLSNYHAVALLATMLAGLIGL 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 A + FP QS LYRLL++A F+IM NIWIA IFLSGMKQY+AI W + +GY ITV AAL Sbjct: 121 ACAFWAFPEQSVLYRLLMIAGFVIMSNIWIAAIFLSGMKQYKAIVWTFLIGYAITVLAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 +R GLEGL+GGFV+GQ LL+ M+ LI RN+ S RF+S+E F +R YPSL+AIGL Y Sbjct: 181 AMRKSGLEGLLGGFVVGQLCLLVGMITLIYRNYTSRRFMSFEVFQKRYAYPSLIAIGLFY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IW+DK MFWY T Q +IGPL AS+IYD+PVFLAYL+IIPGMA+FL+R+ETDFVE Sbjct: 241 NLGIWLDKFMFWYAPSTGQQMIGPLHASIIYDIPVFLAYLAIIPGMAVFLVRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY AVR G+SLE IE RN MV+T+RLGL+EI+K+QAIA+LV+ V G +L+ LGIS Sbjct: 301 YDAFYNAVRGGSSLEHIEDMRNTMVQTIRLGLYEIVKVQAIASLVLFVVGGWVLRLLGIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 LYLPLLY+DVI ASLQVVLLGVLN++FYLD+RR VL L FVVLN T ++L+LGP Sbjct: 361 ELYLPLLYVDVIGASLQVVLLGVLNIYFYLDRRREVLMLTGTFVVLNFVLTRLTLELGPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 +YG+GFA+++ +VV LL RKL+ LEYET+MLQ Sbjct: 421 WYGYGFAVSLLIVVALALYLLDRKLDRLEYETYMLQ 456 >ref|YP_001861408.1| putative transmembrane protein [Burkholderia phymatum STM815] gb|ACC74362.1| putative transmembrane protein [Burkholderia phymatum STM815] Length = 456 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 294/456 (64%), Positives = 359/456 (78%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+L+R++LL L+QAY+YA LI +GPW++SIVGIL+IG+LS + P +I Sbjct: 1 MAGIGFELRKMLRRNTLLGLVQAYTYAGLIGAGPWVLSIVGILLIGVLSIPFVLPTGLIT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+ISLSL+ TG QLA TRF +DRLF K +LPNFHAV VT +LG+ Sbjct: 61 QFQVSVTYLISLSLVLTGPLQLAYTRFTSDRLFEKRRDLVLPNFHAVMFIVTAGSTLLGV 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 AV FLF Q+A YRLL+LA F++M NIWIATIFLSGMKQY +I ++ +GY IT AAL Sbjct: 121 CAVVFLFRQQTAAYRLLMLAGFVVMGNIWIATIFLSGMKQYMSIIAVFFIGYAITTGAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 L P GL GL+ GFVIGQ VLLM ++ALI R++ SD FIS+E F + YPSLM G LY Sbjct: 181 ALNPFGLTGLLSGFVIGQTVLLMGLLALIYRDYQSDHFISFEMFRKAYRYPSLMLTGFLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IW DK MFWY+ T Q +IGPLRAS+IYD+PVFLAYL+IIPGMA+FL+R+ETDFVE Sbjct: 241 NLGIWADKFMFWYSPGTGQPVIGPLRASIIYDIPVFLAYLAIIPGMAVFLMRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY+AVR GASL+ IE+ RN MVE +R G++EI+K+QAIA +++ AG LL+WL IS Sbjct: 301 YDAFYDAVREGASLQHIERMRNAMVEALRNGIWEIMKVQAIAAMMLFAAGAILLQWLQIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 TLYLPLLYIDVIAAS+QVV +G +NVFFYLDKR+IVL L FVV NVAFTAI+L L P Sbjct: 361 TLYLPLLYIDVIAASMQVVFMGTINVFFYLDKRKIVLFLVGLFVVSNVAFTAITLSLNPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 FYG+GFA ++ + VLA LL RKL+ LEYETFMLQ Sbjct: 421 FYGYGFAGSLLLAVLASLYLLDRKLDSLEYETFMLQ 456 >ref|YP_002008605.1| transmembrane protein [Cupriavidus taiwanensis LMG 19424] emb|CAQ72553.1| putative TRANSMEMBRANE PROTEIN, COG4267 [Cupriavidus taiwanensis LMG 19424] Length = 456 Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust. Identities = 289/456 (63%), Positives = 359/456 (78%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+L+RD+L ++ AY+YA +ISSGPWI+SIVGIL+IGMLS + P +I Sbjct: 1 MAGIGFELRKMLRRDNLSGMLSAYAYAGIISSGPWILSIVGILLIGMLSLPFVVPGTLIT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+I+ SLI TG QL+ TRF +DRLF K +H IL N+HAV+L TV+ G +G+ Sbjct: 61 QFQVSVTYLIAGSLILTGPMQLSFTRFTSDRLFEKRDHLILSNYHAVALLATVLSGGIGV 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 A F F QS LYRLL++A F+++ NIWIA IFLS MKQY+AI W + LGY ++VAAAL Sbjct: 121 ACAVFSFGQQSVLYRLLMVAGFVVLSNIWIAAIFLSSMKQYKAIVWTFLLGYAVSVAAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 LR G+EGL+GGFV GQ LL M+ LI RN+ S +F+S+E F RR YPSL+AIGLLY Sbjct: 181 GLRGYGMEGLLGGFVAGQLCLLTGMVTLIYRNYTSRQFVSFEVFQRRYAYPSLVAIGLLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IWIDK MFWY T +IGPLRAS+IYD+PVFLAYL+IIPGMA+FL+R+ETDFVE Sbjct: 241 NLGIWIDKFMFWYAPSTGHEVIGPLRASIIYDIPVFLAYLAIIPGMAVFLVRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY+AVR G+SLE IE RN MV+T+RLGL+EI+K+QAIA L++ G +L+ LGIS Sbjct: 301 YDAFYDAVRGGSSLEHIEDMRNTMVQTIRLGLYEIVKVQAIAALLLFAVGVWVLRLLGIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 LYLPLLY+DVI ASLQVVLLGVLN++FYLD+RR VL L FVVLN A T ++LQLGP Sbjct: 361 ELYLPLLYVDVIGASLQVVLLGVLNIYFYLDRRREVLLLTALFVVLNFALTLVTLQLGPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 +YG+GFA+++ VVV +L KLE LEYET+MLQ Sbjct: 421 WYGYGFAVSLLVVVALALAMLDHKLERLEYETYMLQ 456 >ref|YP_004349447.1| Putative transmembrane protein [Burkholderia gladioli BSR3] gb|AEA63935.1| Putative transmembrane protein [Burkholderia gladioli BSR3] Length = 456 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 287/456 (62%), Positives = 352/456 (77%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+L+R++L LMQAY+YA LI +GPW++SIVGIL+IG+LS + P + Sbjct: 1 MAGIGFELRKMLRRNTLTGLMQAYTYAGLIGAGPWVLSIVGILLIGVLSVPFVKPNGAVT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+I++SL+ TG QL TRF +DRLF K +LPNFHAV L VT ++G Sbjct: 61 QFQVSVTYLIAVSLVLTGPLQLWYTRFTSDRLFEKRRELVLPNFHAVMLVVTAASALIGA 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 F F Q+A YRLL+LA F++M NIWIATIFLSGMK+Y AI ++ +GY T AAL Sbjct: 121 LLALFAFGGQTAGYRLLMLAGFVVMSNIWIATIFLSGMKRYVAIIVVFFVGYAATALAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 L GL GL+ GFV GQAVLL ++ LI R+F SDRFIS+E F++R YPSLM IG LY Sbjct: 181 ALEGFGLTGLLAGFVAGQAVLLCGLLGLIYRDFDSDRFISFEIFEKRYRYPSLMLIGFLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IWIDK MFWY+A T Q +IGPLRAS+IYD+PVFLAYL+IIPGMA+FLLR+ETDFVE Sbjct: 241 NLGIWIDKFMFWYSAGTGQPVIGPLRASIIYDIPVFLAYLAIIPGMAVFLLRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY+AVR GASL+ IE+ + MVE +R G++EI+KIQA+A L++ A +LL WL I Sbjct: 301 YDAFYDAVREGASLQHIERMQRAMVEALREGVWEILKIQAMAALILFAAAPTLLHWLKIP 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 LYLPLLYIDVIAAS+QVV +G++NVFFYLDKRRIVL L AFVVLNV TA++L P Sbjct: 361 ALYLPLLYIDVIAASMQVVFMGIINVFFYLDKRRIVLWLVGAFVVLNVLLTALTLASNPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 YG+GFALA+FVV+LA L RKL+ LEYETFMLQ Sbjct: 421 AYGYGFALALFVVMLASLYWLDRKLDTLEYETFMLQ 456 >ref|YP_841710.1| hypothetical protein H16_B2198 [Ralstonia eutropha H16] emb|CAJ96980.1| conserved hypothetical transmembrane protein [Ralstonia eutropha H16] Length = 456 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 289/456 (63%), Positives = 358/456 (78%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+L+RD+L ++ AY+YA +ISSGPWI+SIVGIL+IGMLS + P ++I Sbjct: 1 MAGIGFELRKMLRRDNLSGMLSAYAYAGIISSGPWILSIVGILLIGMLSLPFVVPGSLIT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+I+ SLI TG QLA TRF +DRLF K +H +L N+HAV+L TV+ G +G+ Sbjct: 61 QFQVSVTYLIAGSLILTGPMQLAFTRFTSDRLFEKRDHLVLSNYHAVALLATVLSGGIGV 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 A F F QS LYRLL++A F+++ NIWIA IFLS MKQY+AI W + LGY I+V AAL Sbjct: 121 ACAVFSFGEQSVLYRLLMVAGFVVLSNIWIAAIFLSSMKQYKAIVWTFLLGYAISVGAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 +LR GLEGL+GGF GQ LL M+ LI RN+ S +F+S+E F RR YPSL+AIGLLY Sbjct: 181 VLRGHGLEGLLGGFAAGQLCLLTGMVTLIYRNYTSRQFMSFEVFQRRHAYPSLVAIGLLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IWIDK MFWY T Q +IGPL AS+IYD+PVFLAYL+IIPGMA+FL+R+ETDFVE Sbjct: 241 NLGIWIDKFMFWYAPSTGQQVIGPLHASIIYDIPVFLAYLAIIPGMAVFLVRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY AVR G+SLE IE RN MV+T+RLGL+EI+K+QAIA L++ G +L+ LGIS Sbjct: 301 YDAFYNAVRGGSSLEHIEDMRNTMVQTIRLGLYEIVKVQAIAALLLFAVGVWVLRLLGIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 LYLPLLY+DVI ASLQVVLLGVLN++FYLD+RR VL L FVVLN A T ++L LGP Sbjct: 361 ELYLPLLYVDVIGASLQVVLLGVLNIYFYLDRRREVLLLTATFVVLNFALTLLTLHLGPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 +YG+GFA+++ VVV LL RKL+ LEYET+MLQ Sbjct: 421 WYGYGFAVSLLVVVALALYLLDRKLDRLEYETYMLQ 456 >ref|YP_004682357.1| OmpR family response regulator [Cupriavidus necator N-1] gb|AEI81125.1| hypothetical membrane protein [Cupriavidus necator N-1] Length = 456 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 289/456 (63%), Positives = 357/456 (78%) Query: 1 MAGIGFELRKILKRDSLLSLMQAYSYAALISSGPWIMSIVGILVIGMLSYTVITPKNVIV 60 MAGIGFELRK+L+RD+L ++ AY+YA +ISSGPWI+SIVGIL+IGMLS + P ++I Sbjct: 1 MAGIGFELRKMLRRDNLSGMLSAYAYAGIISSGPWILSIVGILLIGMLSLPFVVPGSLIT 60 Query: 61 QFQVSITYVISLSLIFTGVFQLALTRFAADRLFVKDNHAILPNFHAVSLTVTVVGGVLGL 120 QFQVS+TY+I+ SLI TG QLA TRF +DRLF K +H +L N+HAV+L TV+ G +G+ Sbjct: 61 QFQVSVTYLIAGSLILTGPMQLAFTRFTSDRLFEKRDHLVLSNYHAVALLATVLSGGIGV 120 Query: 121 AAVAFLFPHQSALYRLLLLAAFIIMCNIWIATIFLSGMKQYQAIFWIYALGYTITVAAAL 180 A F F QS LYRLL++A F+++ NIWIA IFLS MKQY+AI W + LGY I+V AAL Sbjct: 121 ACAVFSFGEQSVLYRLLMVAGFVVLSNIWIAAIFLSSMKQYKAIVWTFLLGYAISVGAAL 180 Query: 181 LLRPLGLEGLMGGFVIGQAVLLMAMMALILRNFPSDRFISYEFFDRRKLYPSLMAIGLLY 240 LR GLEGL+GGF GQ LL M+ LI RN+ S +F+S+E F RR YPSL+AIGLLY Sbjct: 181 ALRGHGLEGLLGGFAAGQLCLLTGMVTLIYRNYTSRQFMSFEVFQRRYAYPSLVAIGLLY 240 Query: 241 NLAIWIDKAMFWYTAETSQAIIGPLRASVIYDLPVFLAYLSIIPGMAIFLLRMETDFVED 300 NL IWIDK MFWY T Q +IGPL AS+IYD+PVFLAYL+IIPGMA+FL+R+ETDFVE Sbjct: 241 NLGIWIDKFMFWYAPSTGQQVIGPLHASIIYDIPVFLAYLAIIPGMAVFLVRIETDFVEY 300 Query: 301 YDAFYEAVRSGASLETIEKHRNGMVETVRLGLFEIIKIQAIATLVVMVAGESLLKWLGIS 360 YDAFY AVR G+SLE IE RN MV+T+RLGL+EI+K+QAIA L++ G +L+ LGIS Sbjct: 301 YDAFYNAVRGGSSLEHIEDMRNTMVQTIRLGLYEIVKVQAIAALLLFAVGVWVLRLLGIS 360 Query: 361 TLYLPLLYIDVIAASLQVVLLGVLNVFFYLDKRRIVLGLCTAFVVLNVAFTAISLQLGPT 420 LYLPLLY+DVI ASLQVVLLGVLN++FYLD+RR VL L FVVLN A T ++L LGP Sbjct: 361 ELYLPLLYVDVIGASLQVVLLGVLNIYFYLDRRREVLLLTATFVVLNFALTLLTLHLGPA 420 Query: 421 FYGFGFALAVFVVVLAGCVLLSRKLELLEYETFMLQ 456 +YG+GFA+++ VVV LL RKL+ LEYET+MLQ Sbjct: 421 WYGYGFAVSLLVVVALALYLLDRKLDRLEYETYMLQ 456