BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0239.p (229 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777601.1| hypothetical protein Hsero_4224 [Herbaspiril... 427 e-118 ref|YP_004715786.1| hypothetical protein PSTAB_3416 [Pseudomonas... 75 6e-12 ref|ZP_06068984.1| predicted protein [Acinetobacter lwoffii SH14... 74 2e-11 ref|YP_264158.1| hypothetical protein Psyc_0871 [Psychrobacter a... 73 3e-11 ref|YP_560135.1| hypothetical protein Bxe_A0851 [Burkholderia xe... 65 6e-09 >ref|YP_003777601.1| hypothetical protein Hsero_4224 [Herbaspirillum seropedicae SmR1] gb|ADJ65693.1| hypothetical protein Hsero_4224 [Herbaspirillum seropedicae SmR1] Length = 242 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 228/229 (99%), Positives = 228/229 (99%) Query: 1 MDRSVLGFLLPQWQAAGEGGLQLVFALLFVLALILMPWLVRRAATPAQWQQRWAALSADP 60 MDRSVLGFLLPQWQAAGEGGLQLVFALLFVLALILMPWLVRRAATPAQWQQRWAALSADP Sbjct: 14 MDRSVLGFLLPQWQAAGEGGLQLVFALLFVLALILMPWLVRRAATPAQWQQRWAALSADP 73 Query: 61 QSLPSSITPEQLSQIVATGPERWARLVPGLLLMAGLLGTFIGLGLALGEASGALDGAQAP 120 QSLPSSITPEQLSQIVATGPERWARLVPGLLLMAGLLGTFIGLGLALGEASGALDGAQAP Sbjct: 74 QSLPSSITPEQLSQIVATGPERWARLVPGLLLMAGLLGTFIGLGLALGEASGALDGAQAP 133 Query: 121 TALAAVLDTLGAKFRIAAWGILSYLILRLWWAASAHEQARLAWSAAALGALAAQVVQRQV 180 TALAAVLDTLGAKFRIAAWGILSYLILRLWWAASAHEQARLAWSAAALGALAAQ VQRQV Sbjct: 134 TALAAVLDTLGAKFRIAAWGILSYLILRLWWAASAHEQARLAWSAAALGALAAQAVQRQV 193 Query: 181 QQEQAQQQRLIEAISHNGQALLAAQQAEAQRAHVRHAELVDALQRQVAR 229 QQEQAQQQRLIEAISHNGQALLAAQQAEAQRAHVRHAELVDALQRQVAR Sbjct: 194 QQEQAQQQRLIEAISHNGQALLAAQQAEAQRAHVRHAELVDALQRQVAR 242 >ref|YP_004715786.1| hypothetical protein PSTAB_3416 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gb|AEJ06697.1| hypothetical protein PSTAB_3416 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length = 644 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 21/215 (9%) Query: 5 VLGFLLPQWQAAGEGGLQLVFALLFVL----ALILMPWLVRRAATPAQWQQRWAALSADP 60 +LGFLLP G +QL+F + +L LI M W A PA W+++W AD Sbjct: 6 ILGFLLP-----GSDLIQLIFGMSILLLGSATLIAMFW----GARPANWERKWNGSGADD 56 Query: 61 QSLPSSITPEQLSQIVATGPERWARLVPGLLLMAGLLGTFIGLGLALGEASGALDGAQAP 120 + E +S VA+ E+ A L+PG+LL+ GLLGTF+GLG+AL +AS L A A Sbjct: 57 LDVEHGSVNE-ISAAVASTGEKMADLMPGVLLILGLLGTFLGLGIALNKASSILIEANAG 115 Query: 121 -------TALAAVLDTLGAKFRIAAWGILSYLILRLWWAASAHEQARLAWSAAALGALAA 173 +L +++ LG KF+ + WG++++LI++ +E+ RL W + A Sbjct: 116 GGMDNTMISLMGMMEGLGTKFKTSTWGLMAFLIIKALAGLKGYEEKRLRWCIGKMKAAFE 175 Query: 174 QVVQRQVQQEQAQQQRLIEAISHNGQALLAAQQAE 208 Q + + QQQ L+ + Q LLA QA Sbjct: 176 HSRQASRESSEQQQQALLGILKKLDQTLLAQLQAN 210 >ref|ZP_06068984.1| predicted protein [Acinetobacter lwoffii SH145] gb|EEY90486.1| predicted protein [Acinetobacter lwoffii SH145] Length = 644 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 114/205 (55%), Gaps = 19/205 (9%) Query: 5 VLGFLLPQWQAAGEGGLQLVFALLFVLA---LILMPWLVRRAATPAQWQQRWAALSADPQ 61 +L FLLP + + L ++ ++ FV+ + + V + A W+ W + + + Sbjct: 3 ILSFLLPFHLSPFK--LDILPSIFFVVIWGLFLFTIFRVYQTAKSENWENNWYGGNKNNK 60 Query: 62 SLPSSITPE-----QLSQIVATGPERWARLVPGLLLMAGLLGTFIGLGLALGEASGALDG 116 S + E ++S+ VAT E+ A ++PG++L+ GLLGTF+GLGLAL +AS L G Sbjct: 61 S--KKLDAEHGSVMEISEAVATPAEKLADIMPGMILIIGLLGTFLGLGLALDKASSILTG 118 Query: 117 AQAPTALAA-------VLDTLGAKFRIAAWGILSYLILRLWWAASAHEQARLAWSAAALG 169 A A + + A +L+ LG KF+ + WG+L++++L++ + + +E+ RL WS + Sbjct: 119 ANALSNMDASMANLMQMLEGLGTKFKTSTWGLLAFILLKVILSKNGYEERRLRWSIEKVK 178 Query: 170 ALAAQVVQRQVQQEQAQQQRLIEAI 194 V +++Q+E+ +LI+ + Sbjct: 179 NELDIVRDQRLQEERNNNNKLIDCM 203 >ref|YP_264158.1| hypothetical protein Psyc_0871 [Psychrobacter arcticus 273-4] gb|AAZ18724.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 590 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 109/194 (56%), Gaps = 20/194 (10%) Query: 24 VFALLFVLALILMP-----WLVRRAATPAQWQQRW--AALSADPQSLPSSI-TPEQLSQI 75 + +FV++LI + WL+ +A A W+ W L+ D +L + +LSQ Sbjct: 16 TLSTIFVVSLITLTIATVVWLLI-SAKEANWEANWYGGDLNDDTNNLAGEHGSVHELSQA 74 Query: 76 VATGPERWARLVPGLLLMAGLLGTFIGLGLALGEASGAL---DGA---QAPTALAAVLDT 129 +AT E+ A ++P +LL+ GLLGTF+GLG+AL +AS L D A A T L ++D Sbjct: 75 IATKAEKVAEIMPSMLLIVGLLGTFLGLGIALNKASTVLAMADTAGMDSAMTQLMGLMDG 134 Query: 130 LGAKFRIAAWGILSYLILRLWWAASAHEQARLAWSAAAL--GALAAQVV--QRQVQQEQA 185 LGAKF+ + WGIL ++IL L + ++ RL W+ + A A ++V +++++ Q Sbjct: 135 LGAKFKTSTWGILCFIILNLLFNIFGFQEKRLVWAVKKVREEAQAKEMVLNSKELERHQV 194 Query: 186 QQQRLIEAISHNGQ 199 + L ++I +N Q Sbjct: 195 MIETL-KSIDNNAQ 207 >ref|YP_560135.1| hypothetical protein Bxe_A0851 [Burkholderia xenovorans LB400] gb|ABE32083.1| hypothetical protein Bxe_A0851 [Burkholderia xenovorans LB400] Length = 505 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 21/188 (11%) Query: 5 VLGFLLPQWQAAGEGGLQLVFALLFVLALILMPWLVRRAATPAQ-WQQRWAALSADPQSL 63 V+ FL P LQ+ F L ++AL+L + A+ W+++W + D S Sbjct: 6 VIDFLTPDLSDR----LQVGF-LTIIVALVLGTAICTHITAKARSWERKWNRGTPDDPSD 60 Query: 64 PSSITPEQLS---QIVATGPERWARLVPGLLLMAGLLGTFIGLGLALGEASGALD----- 115 I ++ Q V+T PE+ A ++P LLL+ GLLGTF+GLG+AL AS L+ Sbjct: 61 DLDIEHGSVTDLWQAVSTTPEKLAEVMPSLLLVIGLLGTFLGLGIALNHASSILNQPDAL 120 Query: 116 ----GAQAPTALAAVLDTLGAKFRIAAWGILSYLILRLWWAASAHEQARLAWSAAALGAL 171 A++ L +L LG KF+ + WGI +++L+ W + + RL W +G + Sbjct: 121 SANGAAKSMNDLVGLLQGLGTKFKTSTWGITGFVLLKFWSECTRFPEKRLTW---VIGKV 177 Query: 172 AAQVVQRQ 179 ++ +R+ Sbjct: 178 KTELERRK 185