BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0196.p (783 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777565.1| transcription accessory protein [Herbaspiril... 1589 0.0 ref|YP_004754565.1| putative polyribonucleotide nucleotidyltrans... 1394 0.0 ref|YP_001354953.1| Tex transcriptional accessory protein [Janth... 1389 0.0 ref|YP_001101248.1| putative polyribonucleotide nucleotidyltrans... 1360 0.0 ref|ZP_08273723.1| RNA binding S1 domain protein [Oxalobacterace... 1328 0.0 ref|YP_001156001.1| RNA-binding S1 domain-containing protein [Po... 1266 0.0 ref|YP_003524171.1| hypothetical protein Slit_1548 [Sideroxydans... 1222 0.0 ref|YP_412278.1| RNA binding S1 [Nitrosospira multiformis ATCC 2... 1202 0.0 ref|YP_003847617.1| Tex-like protein-like [Gallionella capsiferr... 1162 0.0 ref|YP_315703.1| hypothetical protein Tbd_1945 [Thiobacillus den... 1160 0.0 >ref|YP_003777565.1| transcription accessory protein [Herbaspirillum seropedicae SmR1] gb|ADJ65657.1| transcription accessory protein [Herbaspirillum seropedicae SmR1] Length = 783 Score = 1589 bits (4115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 782/783 (99%), Positives = 782/783 (99%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR Sbjct: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA Sbjct: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED Sbjct: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE Sbjct: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH Sbjct: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK Sbjct: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG Sbjct: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL Sbjct: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAK 780 DEKRKRIALTMRLNDT PAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAK Sbjct: 721 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAK 780 Query: 781 LRG 783 LRG Sbjct: 781 LRG 783 >ref|YP_004754565.1| putative polyribonucleotide nucleotidyltransferase [Collimonas fungivorans Ter331] gb|AEK63742.1| putative Polyribonucleotide nucleotidyltransferase [Collimonas fungivorans Ter331] Length = 780 Score = 1394 bits (3609), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/783 (88%), Positives = 732/783 (93%), Gaps = 3/783 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLALELAAKPVQVAAA+ALLDEGATVPFIARYRKE TGGLDD+QLRLLEERLR Sbjct: 1 MLPSIEQRLALELAAKPVQVAAAVALLDEGATVPFIARYRKEATGGLDDIQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RR AI+ASIEEQGKMTP LL AI+ AEDKTRLEDLYLPYK KRRTKAQIAAEA Sbjct: 61 YLRELEVRRGAILASIEEQGKMTPALLQAISLAEDKTRLEDLYLPYKLKRRTKAQIAAEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLTELADALL +P LNPE+EA K++KPAF+TDNGDNPGV D KAALDGARQILMERFSED Sbjct: 121 GLTELADALLGNPELNPEQEADKYLKPAFSTDNGDNPGVADAKAALDGARQILMERFSED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREYLTEHGVVESKV++GKQDAGEKFADYFDYSET TIPSHRALALFRGRREE Sbjct: 181 AALLQALREYLTEHGVVESKVVDGKQDAGEKFADYFDYSETIGTIPSHRALALFRGRREE 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 +LNV+LRLD+EEEKPKWDAPHNPCEGRIA+RFG+SNK R+ADKWLSDTVRW+WRVKVFMH Sbjct: 241 ILNVVLRLDTEEEKPKWDAPHNPCEGRIAARFGISNKNRSADKWLSDTVRWSWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LETELMT LRE AE EAINVFARNLK LLLAAPAGPRATMGLDPGLRTGVKVA++DATGK Sbjct: 301 LETELMTKLRETAEVEAINVFARNLKALLLAAPAGPRATMGLDPGLRTGVKVAVIDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T IYPHQPRNDW+GSLHTL+QLAEKH VSLISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVDTTAIYPHQPRNDWDGSLHTLAQLAEKHKVSLISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFAS+ELPD+DVSLRGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASRELPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIV+YRDMKG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVTYRDMKG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MF+SRA LREVPRLGEKTFEQAAGFLRVMN +NPLD SAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFTSRAGLREVPRLGEKTFEQAAGFLRVMNSDNPLDGSAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 V+G LLK L+PAKYADEKFGVPT+ DILKEL+KPGRDPRPEFTTATFK+GVEEI+DL Sbjct: 601 GVIGDDKLLKSLNPAKYADEKFGVPTIADILKELEKPGRDPRPEFTTATFKDGVEEIRDL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNT+VKDPH+VVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHSVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAK 780 DEKRKRIALTMRL D P GA+ EQR DR D++RLSQ Q+ AP N AMAAAFAK Sbjct: 721 DEKRKRIALTMRLTDNAPVAGAKPEQRADRNDAKRLSQ---QKQAAPAPVNGAMAAAFAK 777 Query: 781 LRG 783 L+G Sbjct: 778 LKG 780 >ref|YP_001354953.1| Tex transcriptional accessory protein [Janthinobacterium sp. Marseille] gb|ABR89555.1| Tex transcriptional accessory protein [Janthinobacterium sp. Marseille] Length = 782 Score = 1389 bits (3594), Expect = 0.0, Method: Compositional matrix adjust. Identities = 684/783 (87%), Positives = 737/783 (94%), Gaps = 1/783 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLA+EL AKP+Q+AAA+ALLDEGATVPFIARYRKEVTGGLDD QLRLLEERLR Sbjct: 1 MLPSIEQRLAVELVAKPIQIAAAVALLDEGATVPFIARYRKEVTGGLDDTQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RRAAI+ASIEEQ KMTP L+DAI HAEDKTRLEDLYLPYK KRRTKAQIA EA Sbjct: 61 YLRELEDRRAAIVASIEEQKKMTPELMDAIMHAEDKTRLEDLYLPYKQKRRTKAQIAVEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLT LADALL +P LNPEEEAAK++KPAFT + +NPGV DTKAALDGARQILMERF+ED Sbjct: 121 GLTPLADALLENPALNPEEEAAKYLKPAFTVEGVENPGVADTKAALDGARQILMERFAED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREYLTEHG+VESKV+EGK+DAG KFADYFDYSET +TIPSHRALA+FRGRREE Sbjct: 181 AGLLQALREYLTEHGIVESKVVEGKEDAGAKFADYFDYSETIATIPSHRALAMFRGRREE 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 MLNV LRLDSEEEKPKWDAPHNPCEGRIASRFG+SN+GR ADKWL DTVRW WRVKVFMH Sbjct: 241 MLNVNLRLDSEEEKPKWDAPHNPCEGRIASRFGISNQGRPADKWLFDTVRWTWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LETELMTNLREKAE EAINVFA NLK LLLAAPAGPRATMGLDPGLRTGVKVA+VDATGK Sbjct: 301 LETELMTNLREKAEVEAINVFALNLKALLLAAPAGPRATMGLDPGLRTGVKVAVVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T T+YPHQPRNDW+G+LHTL+QLAEKH V+LISIGNGTASRETDKLAQDLIK+RPEL Sbjct: 361 VVDTATVYPHQPRNDWDGTLHTLAQLAEKHKVALISIGNGTASRETDKLAQDLIKMRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFAS+ELPD+DVS+RGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASRELPDMDVSIRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLN SVAQSIVSYRDMKG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNNSVAQSIVSYRDMKG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MF+SRA LR VPRLG+KTFEQAAGFLRVM+G+NPLDASAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFTSRADLRAVPRLGDKTFEQAAGFLRVMSGDNPLDASAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 S++G +LK LSPAKYADEKFG+PT+TDILKEL+KPGRDPRPEFTTATFK+GVEEI+DL Sbjct: 601 SIIGDEKMLKSLSPAKYADEKFGIPTITDILKELEKPGRDPRPEFTTATFKDGVEEIRDL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNT+VKDPHTVVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAK 780 DEKRKRIALTMRL+D+ P G++ EQ+GDR DSRRLSQHQNQ+ R Q + +AMAAAFAK Sbjct: 721 DEKRKRIALTMRLSDSAPVAGSKPEQKGDRNDSRRLSQHQNQQSR-QPDSGSAMAAAFAK 779 Query: 781 LRG 783 L+G Sbjct: 780 LKG 782 >ref|YP_001101248.1| putative polyribonucleotide nucleotidyltransferase [Herminiimonas arsenicoxydans] emb|CAL63127.1| putative transcription accessory protein TEX [Herminiimonas arsenicoxydans] Length = 780 Score = 1360 bits (3520), Expect = 0.0, Method: Compositional matrix adjust. Identities = 683/783 (87%), Positives = 731/783 (93%), Gaps = 3/783 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLA+ELAAKP QVAAAI LLDEGATVPFI+RYRKE TGGLDD+QLRLLEERLR Sbjct: 1 MLPSIEQRLAVELAAKPAQVAAAITLLDEGATVPFISRYRKEATGGLDDIQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RRAAI+ASIEEQ KMTP LLDAI HAEDKTRLEDLYLPYK KRRTKAQIA EA Sbjct: 61 YLRELEDRRAAIVASIEEQNKMTPTLLDAIMHAEDKTRLEDLYLPYKQKRRTKAQIAVEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLT LADALL DPTLNPEEEAAK++KPAFT + DNPGV DTKAALDGARQILMERF+ED Sbjct: 121 GLTPLADALLADPTLNPEEEAAKYLKPAFTVEGIDNPGVADTKAALDGARQILMERFAED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREYLTEHG+VESKV+EGKQDAGEKFADYFDYSET +TIPSHRALA+FRGRREE Sbjct: 181 ATLLQALREYLTEHGIVESKVVEGKQDAGEKFADYFDYSETIATIPSHRALAMFRGRREE 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 MLNV LRLD+EEEKPKWDAP NPCE RIA+RFG+SN+GRAADKWL+DTVRW WRVK FMH Sbjct: 241 MLNVNLRLDTEEEKPKWDAPLNPCESRIAARFGISNQGRAADKWLADTVRWTWRVKTFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LETELMTNLREKAE EAINVFA NLK LLLAAPAGPRATMGLDPGLRTGVKVA+VDATGK Sbjct: 301 LETELMTNLREKAEVEAINVFALNLKALLLAAPAGPRATMGLDPGLRTGVKVAVVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T T+YPHQPRNDW+G+LHTLSQLAEKH V+LISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVDTATVYPHQPRNDWDGTLHTLSQLAEKHKVALISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFAS+ELPD+DVS+RGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASRELPDMDVSIRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGL++SVAQSIVSYRD KG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLSSSVAQSIVSYRDTKG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MF+SRA LR VPRLG+KTFEQAAGFLRVM G+NPLDASAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFTSRADLRAVPRLGDKTFEQAAGFLRVMAGDNPLDASAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 S++G LLK L+PAKYADEKFGVPT+TDILKEL+KPGRDPRPEFTTATFK+GVEEI+DL Sbjct: 601 SIIGDDKLLKSLNPAKYADEKFGVPTITDILKELEKPGRDPRPEFTTATFKDGVEEIRDL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNT+VKDPHTVVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAK 780 DEKRKRIALTMRL+D P G++ EQR DR DS+RL+QHQ R A + +AMAAAFAK Sbjct: 721 DEKRKRIALTMRLSDAAPVAGSKPEQRADRNDSKRLAQHQQ---RPAADSGSAMAAAFAK 777 Query: 781 LRG 783 L+G Sbjct: 778 LKG 780 >ref|ZP_08273723.1| RNA binding S1 domain protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32801.1| RNA binding S1 domain protein [Oxalobacteraceae bacterium IMCC9480] Length = 781 Score = 1328 bits (3438), Expect = 0.0, Method: Compositional matrix adjust. Identities = 652/762 (85%), Positives = 712/762 (93%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLALEL A+P QVAAAIALLDEGATVPFIARYRKE TGGLDD+QLRLLEERLR Sbjct: 1 MLPSIEQRLALELVARPAQVAAAIALLDEGATVPFIARYRKEATGGLDDIQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE+RR+AI+++IEEQ KMTP LLD I HAEDKTRLEDLYLP+K KRRTKAQIAAEA Sbjct: 61 YLRELEARRSAIVSAIEEQNKMTPALLDMILHAEDKTRLEDLYLPFKLKRRTKAQIAAEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLTELADALL DP L+PE AA ++KPAF+TD+GDNPGV DTKAALDGARQILMERF+ED Sbjct: 121 GLTELADALLADPQLDPEVAAAAYLKPAFSTDSGDNPGVVDTKAALDGARQILMERFAED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREYLTEHG+VESKVI+G+QDAG KFADYFDYSET TIPSHRALALFRGRREE Sbjct: 181 ATLLQALREYLTEHGIVESKVIDGQQDAGAKFADYFDYSETLGTIPSHRALALFRGRREE 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 ML V+LRLD+E EKPKWDAPHNPCEGRIA+RFGV ++ R ADKWL+DTVRWAWRVKVFMH Sbjct: 241 MLTVLLRLDTEPEKPKWDAPHNPCEGRIAARFGVRHQNRPADKWLADTVRWAWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LETELMT LRE+AE EAINVFA NLK LLLAAPAG ATMGLDPGLRTGVKVA+VDATGK Sbjct: 301 LETELMTGLRERAEVEAINVFALNLKALLLAAPAGQHATMGLDPGLRTGVKVAVVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T TIYPHQPRNDW+GSLHTL+QLAEKH V+LISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVDTSTIYPHQPRNDWDGSLHTLAQLAEKHKVTLISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 K+TKIVVSEAGASVYSASEFAS+ELPD+DVS+RGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KMTKIVVSEAGASVYSASEFASRELPDMDVSIRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGL++SVAQSIV+YRD+KG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLSSSVAQSIVTYRDLKG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 F+SRAALR+VPRLG+KTFEQAAGFLRVM +NPLDASAVHPESY LV+KILADI+KDVK Sbjct: 541 AFTSRAALRDVPRLGDKTFEQAAGFLRVMGSDNPLDASAVHPESYALVQKILADIQKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 +V+G LLK L+PA+YAD+ FGVPT+TDILKEL+KPGRDPRPEFTTATFKEGVE ++DL Sbjct: 601 AVIGDERLLKSLNPARYADDTFGVPTITDILKELEKPGRDPRPEFTTATFKEGVEALRDL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNT+VKDPH+VVKAGQVV+VKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHSVVKAGQVVRVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQ 762 DEKRKRIALTMRL D+ P GA+ EQRGDR D++RLSQHQ Q Sbjct: 721 DEKRKRIALTMRLTDSAPVAGAKVEQRGDRNDAKRLSQHQQQ 762 >ref|YP_001156001.1| RNA-binding S1 domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP34437.1| RNA binding S1 domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 784 Score = 1266 bits (3277), Expect = 0.0, Method: Compositional matrix adjust. Identities = 621/783 (79%), Positives = 687/783 (87%), Gaps = 1/783 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLALEL+AKP QVAAA+ALLDEGATVPFIARYRKE TGGLDDVQLRLLEERL Sbjct: 1 MLPSIEQRLALELSAKPNQVAAAVALLDEGATVPFIARYRKEATGGLDDVQLRLLEERLT 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RR I+ SIEEQGKMTP LL AI AEDKTRLEDLYLPYKPKRRTKAQIA EA Sbjct: 61 YLRELEDRRKTIVTSIEEQGKMTPELLKAIMLAEDKTRLEDLYLPYKPKRRTKAQIALEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GL LA+ LL +P LNPE EAAK++K AF + +NPGVPDTK AL+GARQILMERF+ED Sbjct: 121 GLEPLANDLLANPNLNPEAEAAKYLKEAFKIEETENPGVPDTKTALEGARQILMERFAED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A L+QSLR YL +HGVVESKVI GK+ GEKF+DYFDYSE+ IPSHRALALFRGRRE+ Sbjct: 181 AALVQSLRTYLQDHGVVESKVIAGKEQEGEKFSDYFDYSESIKAIPSHRALALFRGRREQ 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 ML V LRLDSEEEKPKWD+PHNPCE RIA+ F + N GR AD+WL+DTVRW WR+K +H Sbjct: 241 MLMVSLRLDSEEEKPKWDSPHNPCEMRIATHFKIKNDGRPADQWLADTVRWTWRIKCSLH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LETELMT LRE++EAEAI+VFARNLKDLLLAAPAGPR T+GLDPG+RTGVKVA+VDATGK Sbjct: 301 LETELMTALRERSEAEAIHVFARNLKDLLLAAPAGPRVTIGLDPGMRTGVKVAVVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV TD IYPHQP+NDW GSL TL++LAEKH+ +LISIGNGTASRETDKLAQDLIK +PEL Sbjct: 361 VVDTDVIYPHQPKNDWTGSLLTLAKLAEKHHATLISIGNGTASRETDKLAQDLIKAKPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 LTKIVVSEAGASVYSASE+ASKELP +DVSLRGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 GLTKIVVSEAGASVYSASEYASKELPGMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLA+SL AVVEDCVNAVGVDVNTASAPLL+RVSGL+++VA+ IV+YRD KG Sbjct: 481 QYQHDVMQTQLAKSLVAVVEDCVNAVGVDVNTASAPLLSRVSGLSSTVAEGIVAYRDSKG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 F SR+ L+ VPRLG+KTFEQAAGFLR+MNG +PLDASAVHPESYPLVEKIL DIKK VK Sbjct: 541 AFKSRSDLKSVPRLGDKTFEQAAGFLRIMNGNDPLDASAVHPESYPLVEKILKDIKKGVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 V+G SLLK LSP KYAD +FG+PTVTDILKEL+KPGRDPRPEFTTATFKEGVE+I DL Sbjct: 601 EVIGDASLLKSLSPEKYADGQFGLPTVTDILKELEKPGRDPRPEFTTATFKEGVEKISDL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 + DMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNT+VKDPHTVVKAGQVVKVKVLEV Sbjct: 661 KADMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRG-DRTDSRRLSQHQNQRGREQAPANNAMAAAFA 779 DEKRKRIALTMRL+D P G + EQR +R + + Q R ++ AP NNAM A A Sbjct: 721 DEKRKRIALTMRLSDEAPKAGFKPEQRAPNRPKGAEVRKPQEDRRQQSAPMNNAMTMALA 780 Query: 780 KLR 782 KL+ Sbjct: 781 KLK 783 >ref|YP_003524171.1| hypothetical protein Slit_1548 [Sideroxydans lithotrophicus ES-1] gb|ADE11784.1| Tex-like protein protein-like protein [Sideroxydans lithotrophicus ES-1] Length = 786 Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/788 (79%), Positives = 697/788 (88%), Gaps = 7/788 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLA E+AAKP Q+AAAIALLDEGATVPFI+RYRKE TGGLDD QLRLLEERLR Sbjct: 1 MLPSIEQRLAAEIAAKPAQIAAAIALLDEGATVPFISRYRKEATGGLDDTQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RRAAIIASI EQGKMTP LL A++ A DKT LEDLYLPYKPKRRTKAQIA EA Sbjct: 61 YLRELEERRAAIIASITEQGKMTPELLKAVSLATDKTHLEDLYLPYKPKRRTKAQIALEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDN-PGVPDTKAALDGARQILMERFSE 179 GL LADALL +P LNPEEEAAK+++ FT+ GDN PGV D KAALDGARQILMERF+E Sbjct: 121 GLEPLADALLANPLLNPEEEAAKYLREPFTSAAGDNNPGVADAKAALDGARQILMERFAE 180 Query: 180 DAELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRRE 239 DA LLQSLREY+ EHGVV+SKVIEGK DA EK+ADYFDYSE+ +TIPSHRALA+FRGRRE Sbjct: 181 DAGLLQSLREYVQEHGVVQSKVIEGKNDAAEKYADYFDYSESINTIPSHRALAVFRGRRE 240 Query: 240 EMLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFM 299 EML+V LRLDSEEEKP W +PHNPCE RIASRFG+ N R AD+WL+D+VRW WRVK+FM Sbjct: 241 EMLDVQLRLDSEEEKPTWASPHNPCEMRIASRFGIKNMDRPADRWLNDSVRWTWRVKMFM 300 Query: 300 HLETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATG 359 HLETELM LR KAE EAINVFARNLK LLLAAPAGPR TMGLDPG+RTGVKVA+VD TG Sbjct: 301 HLETELMGALRSKAETEAINVFARNLKALLLAAPAGPRVTMGLDPGIRTGVKVAVVDETG 360 Query: 360 KVVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPE 419 KVV T TIYPHQPRNDW+GSLHTLSQLAEKH VS+ISIGNGTASRETDKLA+DLIKLRPE Sbjct: 361 KVVDTATIYPHQPRNDWDGSLHTLSQLAEKHRVSVISIGNGTASRETDKLARDLIKLRPE 420 Query: 420 LKLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGV 479 L +T IVVSEAGASVYSASEFAS+ELP+LDVSLRGAVSIARRLQDPLAELVKIDPKSIGV Sbjct: 421 LNMTSIVVSEAGASVYSASEFASRELPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGV 480 Query: 480 GQYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMK 539 GQYQHDVSQ QLARSLDAVVEDCVNAVGVDVNTAS PLLARVSGL +SVAQ+IV++RD+K Sbjct: 481 GQYQHDVSQVQLARSLDAVVEDCVNAVGVDVNTASVPLLARVSGLTSSVAQAIVNHRDLK 540 Query: 540 GMFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDV 599 G F +RA LREVPRLG+KTFEQAAGFLR+M G +PLDASAVHPESYPLV+ IL DIK+D+ Sbjct: 541 GRFGTRAELREVPRLGDKTFEQAAGFLRIMGGNDPLDASAVHPESYPLVQTILEDIKQDI 600 Query: 600 KSVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKD 659 K V+G LLK L+P+KYA+E+FGVPT+TDILKEL+KPGRDPRPEFTTA+F+EGVEE+KD Sbjct: 601 KGVIGNGGLLKSLNPSKYANEQFGVPTITDILKELEKPGRDPRPEFTTASFREGVEELKD 660 Query: 660 LRPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLE 719 L P MILEGVVTNVAAFGAFVDIGVHQDGLVHISAL++ +VKDPH+VVKAGQ+VKVKVLE Sbjct: 661 LEPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALADKFVKDPHSVVKAGQIVKVKVLE 720 Query: 720 VDEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQRGR-EQAPAN---NAMA 775 VD KRKR++LTMRL D G + E + ++ D+R Q + G+ +APAN +AMA Sbjct: 721 VDVKRKRVSLTMRLTDAAGQAGGKPEAQREQRDNR--GQGKPAGGKPNRAPANEPVSAMA 778 Query: 776 AAFAKLRG 783 AAFAKL+G Sbjct: 779 AAFAKLKG 786 >ref|YP_412278.1| RNA binding S1 [Nitrosospira multiformis ATCC 25196] gb|ABB74886.1| RNA binding S1 [Nitrosospira multiformis ATCC 25196] Length = 790 Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 606/777 (77%), Positives = 671/777 (86%), Gaps = 15/777 (1%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRL+LEL AKP QV AAIALLDEGATVPFIARYRKEVTGGLDD QLRLLEERLR Sbjct: 1 MLPSIEQRLSLELGAKPAQVNAAIALLDEGATVPFIARYRKEVTGGLDDAQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RRAAIIASIEEQGKMTP LL +I AEDKTRLEDLYLP+K KRRTKAQIA EA Sbjct: 61 YLRELEDRRAAIIASIEEQGKMTPALLASILQAEDKTRLEDLYLPFKKKRRTKAQIALEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GL LADALL DPTL PEEEA K++KP F T+ GDNPGVPD KAAL+GARQILMERF+ED Sbjct: 121 GLEPLADALLADPTLQPEEEAIKYLKPPFATEQGDNPGVPDVKAALEGARQILMERFAED 180 Query: 181 AELLQSLREYLTEHGVVESKVI------EGKQDAGEKFADYFDYSETYSTIPSHRALALF 234 AELLQ LREYL +HGVVESKV +GK++ G K++DYFDYSE S IPSHRALALF Sbjct: 181 AELLQWLREYLLDHGVVESKVASDKNGGKGKEEEGAKYSDYFDYSEPLSAIPSHRALALF 240 Query: 235 RGRREEMLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWR 294 RGRREE+L V LRLDSE EKPKWDAPHNPCE RIA RFG+++KGR AD WL DTVRW WR Sbjct: 241 RGRREEILRVALRLDSEAEKPKWDAPHNPCEARIAVRFGIADKGRPADAWLMDTVRWTWR 300 Query: 295 VKVFMHLETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAI 354 VK F HLE +LM +LR +AE EAI VFARNLK LL+AAPAGPR T+GLDPGLRTGVKVA+ Sbjct: 301 VKSFPHLELDLMGSLRTRAETEAIQVFARNLKALLMAAPAGPRVTIGLDPGLRTGVKVAV 360 Query: 355 VDATGKVVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLI 414 VDATG+V+ T TIYPHQPRNDW GSLH L LAEK VSLI+IGNGTASRETDKLA+DLI Sbjct: 361 VDATGRVMETATIYPHQPRNDWEGSLHVLGTLAEKFRVSLIAIGNGTASRETDKLAKDLI 420 Query: 415 KLRPELKLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDP 474 K RP+LKLT IVVSEAGASVYSAS+ AS+E PD+DVSLRGAVSIARRLQDPLAELVK+DP Sbjct: 421 KRRPDLKLTSIVVSEAGASVYSASDLASREFPDMDVSLRGAVSIARRLQDPLAELVKVDP 480 Query: 475 KSIGVGQYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVS 534 KSIGVGQYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLL RVSGLN +VAQSIV Sbjct: 481 KSIGVGQYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLERVSGLNPAVAQSIVV 540 Query: 535 YRDMKGMFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILAD 594 YR+ GMF+SR AL +VPRLGEKTFEQAAGFLRVM+GENPLDASAVHPESYP+V++IL+D Sbjct: 541 YREENGMFASREALHQVPRLGEKTFEQAAGFLRVMHGENPLDASAVHPESYPVVQRILSD 600 Query: 595 IKKDVKSVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGV 654 +K++++S++G LLK L+PA+YAD++FGVPTVTDI+KEL+KPGRDPRPEF TA FKEGV Sbjct: 601 LKQEIRSIIGNNKLLKSLNPARYADDRFGVPTVTDIVKELEKPGRDPRPEFITAAFKEGV 660 Query: 655 EEIKDLRPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVK 714 EI DL+P M+LEGVVTNVAAFGAFVDIGVHQDGLVHISAL++ +VKDPHTVVK GQVVK Sbjct: 661 NEISDLQPGMLLEGVVTNVAAFGAFVDIGVHQDGLVHISALADKFVKDPHTVVKVGQVVK 720 Query: 715 VKVLEVDEKRKRIALTMRLNDTVPAP--------GARNEQRGDRTDSRRLSQHQNQR 763 VKVLEVDEKRKRIALTMRL D PAP G R + R + S + Q Q+ R Sbjct: 721 VKVLEVDEKRKRIALTMRLADA-PAPQTQEARGAGKREQPRNRKDRSAKPQQKQDSR 776 >ref|YP_003847617.1| Tex-like protein-like [Gallionella capsiferriformans ES-2] gb|ADL55853.1| Tex-like protein-like [Gallionella capsiferriformans ES-2] Length = 779 Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/785 (74%), Positives = 671/785 (85%), Gaps = 8/785 (1%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIE RLA EL A+P QVAAAIALLDEGATVPFI+RYRKE TGGLDD+QLRLL++RL Sbjct: 1 MLPSIEHRLANELGARPAQVAAAIALLDEGATVPFISRYRKEATGGLDDIQLRLLDDRLS 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE+RRAAII S+ Q KMTP LLDAI HA DKT LEDLYLPYK KRRT+AQIA EA Sbjct: 61 YLRELEARRAAIIESVTTQNKMTPQLLDAIMHAADKTHLEDLYLPYKLKRRTRAQIALEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GL LADALL +P L+PE+EAA ++K AF+TD GDNPGV D K+ALDGARQILMERFSED Sbjct: 121 GLGALADALLRNPALHPEQEAAGYLKAAFSTDQGDNPGVLDAKSALDGARQILMERFSED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREY+ +HGVVE++VIE K++A K++DYFDYSE+ TIPSHR LA+ RGRRE Sbjct: 181 AALLQALREYVLDHGVVEARVIEEKKEAAAKYSDYFDYSESIKTIPSHRTLAILRGRREG 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 +LNV LRLD+E +KP AP+NPCE RIA+RFGV++K R AD WL+DTVR+ WRVK+F+H Sbjct: 241 LLNVQLRLDTEADKPLMTAPYNPCEARIAARFGVAHKMRPADNWLADTVRYTWRVKIFLH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LETELM+ LR KA+ +AI+VFA NLK LLLAAPAGPR TMGLDPG+RTGVKVA+VD TG+ Sbjct: 301 LETELMSALRIKADTDAISVFALNLKALLLAAPAGPRTTMGLDPGVRTGVKVAVVDETGR 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 V+ T IYPHQPR DW GSLHTL++LAEKH VSLI+ GNGTASRETDKLA DLI+LRPEL Sbjct: 361 VLDTCVIYPHQPRCDWEGSLHTLAKLAEKHRVSLIATGNGTASRETDKLALDLIRLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KL VVSEAGASVYSASEFASKELPD+DVSLRGAVSIARRLQDPLAELVKIDPK+IGVG Sbjct: 421 KLINAVVSEAGASVYSASEFASKELPDMDVSLRGAVSIARRLQDPLAELVKIDPKAIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDVSQSQLARSL+ VVEDCVNAVGVDVNTASAPLLARVSGLN +VAQ+IV++RD G Sbjct: 481 QYQHDVSQSQLARSLNTVVEDCVNAVGVDVNTASAPLLARVSGLNNTVAQNIVAHRDSNG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 F++RA L EVPRLG+K FEQAAGFLR+ G NPLDAS VHPESYPLV++IL DIK D+K Sbjct: 541 RFATRAQLLEVPRLGKKAFEQAAGFLRITGGSNPLDASTVHPESYPLVKRILNDIKLDLK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 V+G ++LL L+PA+Y DEKFG+PT+TDIL+ELDKPG DPRPEFTTATF+EG+E+I DL Sbjct: 601 GVIGNSALLSSLNPARYQDEKFGLPTITDILRELDKPGHDPRPEFTTATFREGIEKISDL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 +PDMILEGVVTNVAAFGAFVDIGVHQDGLVHISAL+N++VKDPHTVVKAGQ+VKVKVLEV Sbjct: 661 QPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALANSFVKDPHTVVKAGQIVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPAN--NAMAAAF 778 DEKRKRIALTMRL D P A+ + ++R H+ Q E N MAAAF Sbjct: 721 DEKRKRIALTMRLADAAPKADAKPRE------TKRPPVHRGQEKSESVKMTTPNVMAAAF 774 Query: 779 AKLRG 783 +KL+ Sbjct: 775 SKLKA 779 >ref|YP_315703.1| hypothetical protein Tbd_1945 [Thiobacillus denitrificans ATCC 25259] gb|AAZ97898.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 800 Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 583/770 (75%), Positives = 664/770 (86%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLP I RLA E+AA P QVAAAIALLDEGATVPFIARYRKE TGGLDD QLRLLE+RLR Sbjct: 1 MLPPIAHRLAAEVAATPAQVAAAIALLDEGATVPFIARYRKEATGGLDDAQLRLLEDRLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE+RRAAII S+ EQGKMTP LL A++ A DKT+LEDLYLPYKPKRRTKAQIA EA Sbjct: 61 YLRELEARRAAIIDSVNEQGKMTPELLSALSLAADKTQLEDLYLPYKPKRRTKAQIAQEA 120 Query: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GL LADALL +P L+PE EA +++ F TD G+NPGVPDTKAALDGARQILMERF+ED Sbjct: 121 GLAPLADALLANPLLDPEHEAGAYLREPFATDAGENPGVPDTKAALDGARQILMERFAED 180 Query: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ LR+YL EHGVVESK+ EGK A EK+ADYFDY+E + IPSHRALAL RGRRE+ Sbjct: 181 ATLLQDLRDYLLEHGVVESKLREGKASAAEKYADYFDYAEALAAIPSHRALALLRGRRED 240 Query: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 +L+V LRLDSEEE+P W APHNPCE RIA RFG++++ R AD+WL DTVR+ WRVK FMH Sbjct: 241 LLDVRLRLDSEEERPAWSAPHNPCEARIARRFGIADQNRPADRWLMDTVRFTWRVKSFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 LE ELM LR +AEAEAI VFARNLKDLLLAAP GP TMGLDPG+RTGVKVA+VD TGK Sbjct: 301 LELELMGALRSRAEAEAIKVFARNLKDLLLAAPGGPHVTMGLDPGVRTGVKVAVVDETGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T IYPH P+NDW+GSLH L +LAEKH+V+LI+IGNGTASRETDKLA++LI LRPEL Sbjct: 361 VVDTAVIYPHAPKNDWDGSLHALGKLAEKHHVTLIAIGNGTASRETDKLARELITLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 LT IVVSEAGASVYSAS +AS+ELP+LDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 GLTSIVVSEAGASVYSASAYASQELPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDVSQ LAR+LDAVVEDCVNAVGVDVNTASAPLLARVSGL SVA +IV++RD KG Sbjct: 481 QYQHDVSQFDLARALDAVVEDCVNAVGVDVNTASAPLLARVSGLGTSVAHAIVAHRDAKG 540 Query: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 F++R LREVPRLGEKTFEQAAGFLR++ G++PLDASAVHPESYPLV++ILADIK+++K Sbjct: 541 RFATRGQLREVPRLGEKTFEQAAGFLRIVGGDDPLDASAVHPESYPLVQRILADIKQELK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 +V+G +LK LS AKYADEKFG+PT++DIL+EL+KPGRDPRPEF TA F++G+E + DL Sbjct: 601 AVIGNVQVLKTLSAAKYADEKFGMPTISDILRELEKPGRDPRPEFATAAFRDGIETLADL 660 Query: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 +P+M+LEGVVTNVAAFGAFVDIGVHQDGLVHISALSN++VKDPHTVVKAGQ+VKVKVLEV Sbjct: 661 KPEMVLEGVVTNVAAFGAFVDIGVHQDGLVHISALSNSFVKDPHTVVKAGQIVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTVPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPA 770 DEKRKRIALTMRL D AR+E R R ++ + + Q RE PA Sbjct: 721 DEKRKRIALTMRLGDAAAGNTARHETRQTRHEAGQARRGLGQAPREARPA 770