BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0179.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777551.1| hypothetical protein Hsero_4173 [Herbaspiril... 545 e-153 ref|YP_004754657.1| hypothetical protein CFU_4012 [Collimonas fu... 143 4e-32 gb|AAT42410.1| Tfp pilus assembly protein FimV [Collimonas fungi... 140 2e-31 ref|YP_001101169.1| hypothetical protein HEAR2935 [Herminiimonas... 111 1e-22 ref|YP_001354872.1| hypothetical protein mma_3182 [Janthinobacte... 102 9e-20 ref|ZP_01914163.1| hypothetical membrane associated protein [Lim... 93 5e-17 ref|YP_002890329.1| hypothetical protein Tmz1t_3357 [Thauera sp.... 89 9e-16 ref|ZP_06685350.1| conserved hypothetical protein [Achromobacter... 86 9e-15 ref|YP_002912989.1| hypothetical protein bglu_1g32220 [Burkholde... 83 5e-14 ref|YP_724661.1| hypothetical protein H16_A0141 [Ralstonia eutro... 80 3e-13 >ref|YP_003777551.1| hypothetical protein Hsero_4173 [Herbaspirillum seropedicae SmR1] gb|ADJ65643.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 286 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 283/286 (98%), Positives = 283/286 (98%) Query: 1 MLNQDKMPGAGSVGDTLEFMKNMWSSMGAPAMATPSLSVEDINKKIGDLKTVASWLELNL 60 MLNQDKMPGAGSVGDTLEFMKNMWSSMGAPAMATPSLSVEDINKKIGDLKTVASWLELNL Sbjct: 1 MLNQDKMPGAGSVGDTLEFMKNMWSSMGAPAMATPSLSVEDINKKIGDLKTVASWLELNL 60 Query: 61 NMLKATIQTLEVQSATLSTLQAMSAIMASQQAPAADAAPEEGKAASPFPFGFPMWPGAGA 120 NMLKATIQTLEVQSATLSTLQAMSAIMASQQAPA DAAPEEGKAASPFPFGFPMWPGAGA Sbjct: 61 NMLKATIQTLEVQSATLSTLQAMSAIMASQQAPADDAAPEEGKAASPFPFGFPMWPGAGA 120 Query: 121 SQAADEEPADAQDVAEEQEEPQDELQEEAAAPAGEADAPAAEAPDLQAAMANPNAWWNLL 180 SQAADEEPA AQDVAEEQEEPQDELQEEAAAPAGEADAPAAEAPDLQAAMANPNAWWNLL Sbjct: 121 SQAADEEPAGAQDVAEEQEEPQDELQEEAAAPAGEADAPAAEAPDLQAAMANPNAWWNLL 180 Query: 181 QDQFKQAVGNALAGGQPEQEPLLKPAKPPKAPKRSENKTVAAKPKAAPKVRPTGAPKAGK 240 QDQFKQAVGNALAGGQPEQEPLLKPAKPPKAPKRSENKTVAAKPKAAPKVRP GAPKAGK Sbjct: 181 QDQFKQAVGNALAGGQPEQEPLLKPAKPPKAPKRSENKTVAAKPKAAPKVRPAGAPKAGK 240 Query: 241 AAKPAPKKPPVKKAPRSAANTSAPGRTAVVQSRQNKKPASRKPTSP 286 AAKPAPKKPPVKKAPRSAANTSAPGRTAVVQSRQNKKPASRKPTSP Sbjct: 241 AAKPAPKKPPVKKAPRSAANTSAPGRTAVVQSRQNKKPASRKPTSP 286 >ref|YP_004754657.1| hypothetical protein CFU_4012 [Collimonas fungivorans Ter331] gb|AEK63834.1| hypothetical protein CFU_4012 [Collimonas fungivorans Ter331] Length = 232 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 102/254 (40%), Positives = 135/254 (53%), Gaps = 50/254 (19%) Query: 1 MLNQDKMPGAGSVGDTLEFMKNMWSSMGAPAMATPSLSVEDINKKIGDLKTVASWLELNL 60 M+++ +PGA ++ D+LEF+K MW MG P M P+LSVE+INKKI DLK V SWL LNL Sbjct: 1 MMSRSSIPGADAMQDSLEFIKKMWGGMGVPGMVVPTLSVEEINKKISDLKAVESWLNLNL 60 Query: 61 NMLKATIQTLEVQSATLSTLQAMSAI--MASQQAPAADAAPEEGKAASP--FPFGFPMWP 116 NML+ TIQ LEVQS T+S LQAM+++ +++ +DA P AS FPF F Sbjct: 61 NMLRTTIQALEVQSGTISALQAMASVNQAGTERQGDSDAEPNASAWASAAGFPFSF---- 116 Query: 117 GAGASQAADEEPADAQDVAEEQEEPQDELQEEAAAPAGEADAPAAEAPDLQAAMANPNAW 176 PA Q+ +AA PA E + P A + + ++ N NAW Sbjct: 117 ---------MNPA--------QDSAAPPASAQAAQPATETEKPPAPSSAAEPSLGNSNAW 159 Query: 177 WNLLQDQFKQAVGNALAGGQPEQEPLLKPAKPPKAPKRSENKTVAAKPKAAPKVRPTGAP 236 W+LLQ+QFKQAV + A E ++ PA K A KV+P A Sbjct: 160 WDLLQNQFKQAVNSVAAA-----ENMVMPA------------------KTAAKVKP--AA 194 Query: 237 KAGKAAKPAPKKPP 250 K+G A A KPP Sbjct: 195 KSGSKASGAASKPP 208 >gb|AAT42410.1| Tfp pilus assembly protein FimV [Collimonas fungivorans Ter331] Length = 231 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/253 (39%), Positives = 134/253 (52%), Gaps = 50/253 (19%) Query: 2 LNQDKMPGAGSVGDTLEFMKNMWSSMGAPAMATPSLSVEDINKKIGDLKTVASWLELNLN 61 +++ +PGA ++ D+LEF+K MW MG P M P+LSVE+INKKI DLK V SWL LNLN Sbjct: 1 MSRSSIPGADAMQDSLEFIKKMWGGMGVPGMVVPTLSVEEINKKISDLKAVESWLNLNLN 60 Query: 62 MLKATIQTLEVQSATLSTLQAMSAI--MASQQAPAADAAPEEGKAASP--FPFGFPMWPG 117 ML+ TIQ LEVQS T+S LQAM+++ +++ +DA P AS FPF F Sbjct: 61 MLRTTIQALEVQSGTISALQAMASVNQAGTERQGDSDAEPNASAWASAAGFPFSF----- 115 Query: 118 AGASQAADEEPADAQDVAEEQEEPQDELQEEAAAPAGEADAPAAEAPDLQAAMANPNAWW 177 PA Q+ +AA PA E + P A + + ++ N NAWW Sbjct: 116 --------MNPA--------QDSAAPPASAQAAQPATETEKPPAPSSAAEPSLGNSNAWW 159 Query: 178 NLLQDQFKQAVGNALAGGQPEQEPLLKPAKPPKAPKRSENKTVAAKPKAAPKVRPTGAPK 237 +LLQ+QFKQAV + A E ++ PA K A KV+P A K Sbjct: 160 DLLQNQFKQAVNSVAAA-----ENMVMPA------------------KTAAKVKP--AAK 194 Query: 238 AGKAAKPAPKKPP 250 +G A A KPP Sbjct: 195 SGSKASGAASKPP 207 >ref|YP_001101169.1| hypothetical protein HEAR2935 [Herminiimonas arsenicoxydans] emb|CAL63048.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 192 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 102/213 (47%), Gaps = 62/213 (29%) Query: 3 NQDKMPGAGSVGDTLEFMKNMW----SSMGAPAMATPSLSVEDINKKIGDLKTVASWLEL 58 N +PG ++ DTLEF+K MW +S G P M P+LS++++NK+I DLK V SWL + Sbjct: 5 NMPNLPGFDAMADTLEFVKKMWGGAHASTGIPGMVIPTLSLDELNKQIADLKAVESWLNV 64 Query: 59 NLNMLKATIQTLEVQSATLSTLQAMSAIMASQQAPAADAAPEEGKAASPFPFGFPMWPGA 118 N+NML+ TIQ LEVQ+AT+STLQAM GK FG Sbjct: 65 NMNMLRGTIQALEVQAATISTLQAM------------------GKTMGAAAFG------- 99 Query: 119 GASQAADEEPADAQDVAEEQEEPQDELQEEAAAPAGE-ADAPAAEAPDLQAAMANPNAWW 177 +DA PAG AD PA +A + A WW Sbjct: 100 ----------SDA--------------HSNLVPPAGTGADHPAPDAAQVAA------DWW 129 Query: 178 NLLQDQFKQAVGNALA--GGQPEQEPLLKPAKP 208 NLLQ+QF QAV +A GG + E + KP Sbjct: 130 NLLQEQFNQAVSGVMAEEGGATQAESAMHAGKP 162 >ref|YP_001354872.1| hypothetical protein mma_3182 [Janthinobacterium sp. Marseille] gb|ABR91116.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 183 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 5/102 (4%) Query: 3 NQDKMPGAGSVGDTLEFMKNMWSSM-----GAPAMATPSLSVEDINKKIGDLKTVASWLE 57 N +PG ++ +T+EF+KNMW M G P M P+LSVE+INK+I DLK V +WL Sbjct: 5 NMPNLPGFDAMAETMEFVKNMWGGMKPPATGIPGMVMPTLSVEEINKQITDLKAVEAWLT 64 Query: 58 LNLNMLKATIQTLEVQSATLSTLQAMSAIMASQQAPAADAAP 99 N+NML+ TIQ LEVQSAT+STL++M A + A AAP Sbjct: 65 ANMNMLRGTIQALEVQSATISTLRSMGQTFAPEPKAAEPAAP 106 >ref|ZP_01914163.1| hypothetical membrane associated protein [Limnobacter sp. MED105] gb|EDM84399.1| hypothetical membrane associated protein [Limnobacter sp. MED105] Length = 217 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 24/203 (11%) Query: 12 SVGDTLEFMKNMWSSMGAPAMATPSLSVEDINKKIGDLKTVASWLELNLNMLKATIQTLE 71 SV D +F+K +W S+ P++ P+ +++++K+I DLK V WL +NL+ML+ATIQ LE Sbjct: 10 SVTDGFDFVKKIWGSLPIPSVMNPTTDLDELDKRISDLKAVEQWLNVNLSMLRATIQGLE 69 Query: 72 VQSATLSTLQAMSAIMASQQAPAADAAPEEGKAASPFPFGFPMWPGAGASQAADEEPADA 131 VQ T++T+++ S S D A + +A + A QAA P Sbjct: 70 VQRGTIATIKSFS----SNLGLGGDRASDVNQAVNEEII-------RNAMQAAVAPPPVP 118 Query: 132 QDVAEEQEEPQDELQEEAAAPAGEADAPAAEAPDLQAAMANPNAWWNLLQDQFKQAVGNA 191 + + P E PA + AA +A ++N AWW LLQDQF + V A Sbjct: 119 RVEPVAPKIPDPE-------PAATTPSDAAAQESSKAIVSNATAWWGLLQDQFNKVVATA 171 Query: 192 LAGGQ------PEQEPLLKPAKP 208 G + EP KP KP Sbjct: 172 AMTGSGADVSPDDAEPSKKPVKP 194 >ref|YP_002890329.1| hypothetical protein Tmz1t_3357 [Thauera sp. MZ1T] gb|ACR01952.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 143 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 6/104 (5%) Query: 15 DTLEFMKNMWSSMG--APAMATPSLSVEDINKKIGDLKTVASWLELNLNMLKATIQTLEV 72 D LEF++ MW+ MG P M TP+L V++++K+I D++ V WL++NLNML+ +IQ LE+ Sbjct: 9 DPLEFVRGMWNQMGFSLPGMVTPTLDVDELDKRITDMRAVEGWLKMNLNMLQMSIQGLEM 68 Query: 73 QSATLSTLQAMSAIMASQQAPAADAAPEEGKAASPFPFGFPMWP 116 Q A L+ ++AMS +QQA A E G A+PF MWP Sbjct: 69 QRAALAAVKAMSQ--QAQQAGEGGGATEPG--ANPFAAAAAMWP 108 >ref|ZP_06685350.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gb|EFF77747.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 279 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 21/197 (10%) Query: 7 MPGAGSVGD--------TLEFMKNMWSSMGAPAMATPSL------SVEDINKKIGDLKTV 52 +PG G D ++E M+ W+ + P SL ++ED++++I +L++V Sbjct: 11 LPGMGQNSDLSGNPLLASMEMMRQAWAGLTGPGGLASSLPMAPPMNLEDLDRRIAELRSV 70 Query: 53 ASWLELNLNMLKATIQTLEVQSATLSTLQAMSAIMASQQAPAADAAPEEGKAASPFP--F 110 +WL +NL+ML +TIQ +EVQ +T+STL+A AS A + AASP Sbjct: 71 ENWLRMNLSMLSSTIQGMEVQRSTISTLRAFVDSAASMDMSAV----RDSGAASPLEVVL 126 Query: 111 GFPMWPGAGASQAADEEPADAQDVAEEQEEPQDELQEEAA-APAGEADAPAAEAPDLQAA 169 G P + A + + A+ A + +P + A A A E+D P AA Sbjct: 127 GLKPAPKSTAKPTSSASSSGARTDAPQDTKPSSDTGAGATKASASESDGPGMTEQMGAAA 186 Query: 170 MANPNAWWNLLQDQFKQ 186 + NAWW+LLQ QF Q Sbjct: 187 QSASNAWWDLLQQQFNQ 203 >ref|YP_002912989.1| hypothetical protein bglu_1g32220 [Burkholderia glumae BGR1] gb|ACR30285.1| Hypothetical protein bglu_1g32220 [Burkholderia glumae BGR1] Length = 299 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 83/172 (48%), Gaps = 19/172 (11%) Query: 32 MATPSLSVEDINKKIGDLKTVASWLELNLNMLKATIQTLEVQSATLSTLQAMSAIMASQQ 91 M P SVE+++K+I DL+ V WL+LNL ML++ IQ LEVQ ATL+TL+A A+ Sbjct: 56 MMAPLASVEELDKRITDLRAVEQWLKLNLGMLQSAIQALEVQRATLATLRAFGALAQESM 115 Query: 92 APAADAAPEEGKA------ASPF--PFGFPMWPGAGASQAADEEPADAQDVAEEQEEPQD 143 A A A +A ASPF PF GAS PA + + Sbjct: 116 AAAEAAVASGAEAKRTAAPASPFASPF--------GASPFGAAAPASPEAGRAAGAAGEA 167 Query: 144 ELQEEAAAPAGEAD---APAAEAPDLQAAMANPNAWWNLLQDQFKQAVGNAL 192 A+ AG AD AP A P A +P WWNLLQ QF Q A+ Sbjct: 168 AKAGPASGNAGAADSGPAPGAGVPPTGAEAFDPAGWWNLLQSQFSQLANFAM 219 >ref|YP_724661.1| hypothetical protein H16_A0141 [Ralstonia eutropha H16] emb|CAJ91293.1| hypothetical membrane associated protein [Ralstonia eutropha H16] Length = 263 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 90/180 (50%), Gaps = 37/180 (20%) Query: 17 LEFMKNMWSS-MGAPA-------MATPSLSVEDINKKIGDLKTVASWLELNLNMLKATIQ 68 +FM+ +W S G PA TP + ++D++K+I DLK V SWL+LN N+L+ TIQ Sbjct: 12 FDFMRRLWGSGSGMPAGMMPGLQAMTPPMDLDDLDKRIADLKAVESWLQLNTNLLRTTIQ 71 Query: 69 TLEVQSATLSTLQAMSAIMASQQAPAADAAPEEGKAASPFPFGFPMWPGAGASQAADEEP 128 LEVQ ATL LQ ++ + A +A E A+ P S AA E Sbjct: 72 GLEVQRATLVALQTFGNALSPE---AMQSAMENVARAANTP-----------SAAAPERD 117 Query: 129 ADAQDVAEEQEEPQDELQEEAAAPAGEADAPAAEAPDLQAAMANPNA--WWNLLQDQFKQ 186 A A + Q+EP PA E P A A D +A+ PNA WW+LLQ QF Q Sbjct: 118 AGADADSGTQQEP----------PAAE--RPQAAASDTDSALP-PNAALWWDLLQQQFNQ 164