BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0169.p (160 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777543.1| tRNA/rRNA methyltransferase [Herbaspirillum ... 328 1e-88 ref|YP_004754653.1| tRNA (cytosine-O-)-methyltransferase [Collim... 273 6e-72 ref|YP_001101156.1| putative tRNA/rRNA methyltransferase [Hermin... 269 1e-70 ref|YP_294536.1| RNA methyltransferase TrmH, group 2 [Ralstonia ... 265 1e-69 ref|ZP_08273188.1| tRNA (cytosine34-2'-O-)-methyltransferase [Ox... 265 2e-69 ref|YP_003746890.1| tRNA/rRNA methyltransferase (spou) [Ralstoni... 263 4e-69 ref|YP_003753663.1| tRNA/rRNA methyltransferase (spoU) [Ralstoni... 262 1e-68 gb|AEG70338.1| trna/rrna methyltransferase protein [Ralstonia so... 261 2e-68 ref|YP_724857.1| rRNA methylase (SpoU class) [Ralstonia eutropha... 261 2e-68 ref|YP_582412.1| putative rRNA methylase [Cupriavidus metallidur... 261 2e-68 >ref|YP_003777543.1| tRNA/rRNA methyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65635.1| tRNA/rRNA methyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 160 Score = 328 bits (842), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 157/160 (98%), Positives = 159/160 (99%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +FHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH Sbjct: 1 MFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 Q WDQFLAHRRQ+PLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF Sbjct: 61 QDWDQFLAHRRQEPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS Sbjct: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 >ref|YP_004754653.1| tRNA (cytosine-O-)-methyltransferase [Collimonas fungivorans Ter331] gb|AAT42383.1| putative rRNA methylase [Collimonas fungivorans Ter331] gb|AEK63830.1| tRNA (cytosine-O-)-methyltransferase [Collimonas fungivorans Ter331] Length = 160 Score = 273 bits (698), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 129/160 (80%), Positives = 139/160 (86%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +FHVVLVEPEIPPNTGNIIRLCANTGAQLHL+EPLGFPLDD+KMRRAGLDYH+YA MQVH Sbjct: 1 MFHVVLVEPEIPPNTGNIIRLCANTGAQLHLIEPLGFPLDDSKMRRAGLDYHDYATMQVH 60 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 W+ F+A R +D +RMFAMTTHGSTPFA L FRPGD FVFGSETRGL P RESF Sbjct: 61 ADWNDFVASMRDAGSYDPSRMFAMTTHGSTPFASLQFRPGDIFVFGSETRGLDPALRESF 120 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 SQRIRLPMRP NRS+NLSNTVAVVVYEAWRQNGY GG+ Sbjct: 121 APSQRIRLPMRPDNRSLNLSNTVAVVVYEAWRQNGYSGGA 160 >ref|YP_001101156.1| putative tRNA/rRNA methyltransferase [Herminiimonas arsenicoxydans] emb|CAL63035.1| Putative RNA methyltransferase [Herminiimonas arsenicoxydans] Length = 160 Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 129/159 (81%), Positives = 138/159 (86%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +FHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYH+YA M+VH Sbjct: 1 MFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHDYAQMKVH 60 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 W FL D + ARMFA+TTHGSTPFAGLAF+PGD FVFGSET+GLAP RESF Sbjct: 61 HDWQAFLDSFPADQPLNPARMFALTTHGSTPFAGLAFQPGDIFVFGSETKGLAPALRESF 120 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGG 159 P QRIRLPMRP NRS+NLSNTVAVVVYEAWRQNG+ GG Sbjct: 121 PPVQRIRLPMRPDNRSLNLSNTVAVVVYEAWRQNGFTGG 159 >ref|YP_294536.1| RNA methyltransferase TrmH, group 2 [Ralstonia eutropha JMP134] gb|AAZ59692.1| RNA methyltransferase TrmH, group 2 [Ralstonia eutropha JMP134] Length = 156 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 125/160 (78%), Positives = 142/160 (88%), Gaps = 4/160 (2%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +FHVVLVEPEIPPNTGN+IRLCANTGAQLHLV+PLGFPL+DA+MRRAGLDYHEYA M+VH Sbjct: 1 MFHVVLVEPEIPPNTGNVIRLCANTGAQLHLVKPLGFPLEDARMRRAGLDYHEYATMRVH 60 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 WD +A + DP +RMFA+TTHGSTPF ++F+PGD FVFGSETRGLAPERRESF Sbjct: 61 DSWDALMASEQPDP----SRMFALTTHGSTPFGQVSFQPGDWFVFGSETRGLAPERRESF 116 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 P SQRIRLPMRP NRS+NLSNTVAVVV+EAWRQNG+ GG+ Sbjct: 117 PPSQRIRLPMRPNNRSLNLSNTVAVVVFEAWRQNGFAGGA 156 >ref|ZP_08273188.1| tRNA (cytosine34-2'-O-)-methyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33332.1| tRNA (cytosine34-2'-O-)-methyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 156 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 128/160 (80%), Positives = 138/160 (86%), Gaps = 4/160 (2%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +FHVVLVEPEIPPNTGNIIRLCANTGAQLHL+EPLGFPLDDAKMRRAGLDYH+YA MQVH Sbjct: 1 MFHVVLVEPEIPPNTGNIIRLCANTGAQLHLIEPLGFPLDDAKMRRAGLDYHDYATMQVH 60 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 W +F+A + DP RMFA+TTHGSTPFA FRPGD FVFGSET+GL P RESF Sbjct: 61 PDWSRFIATVQPDP----QRMFALTTHGSTPFATGQFRPGDVFVFGSETKGLDPALRESF 116 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 P SQRIRLPMRP NRS+NLSNTVAVVVYEAWRQNGY GG+ Sbjct: 117 PPSQRIRLPMRPDNRSLNLSNTVAVVVYEAWRQNGYAGGA 156 >ref|YP_003746890.1| tRNA/rRNA methyltransferase (spou) [Ralstonia solanacearum CFBP2957] emb|CBJ44307.1| putative tRNA/rRNA methyltransferase (spoU) [Ralstonia solanacearum CFBP2957] Length = 175 Score = 263 bits (673), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 126/160 (78%), Positives = 142/160 (88%), Gaps = 4/160 (2%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +F+VVLVEPEIPPNTGN+IRLCANTGAQLHL+EPLGFPL+DA+MRRAGLDYHEYA M+VH Sbjct: 20 MFNVVLVEPEIPPNTGNVIRLCANTGAQLHLIEPLGFPLEDARMRRAGLDYHEYATMRVH 79 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 W+ FL + DP ARMFA+TT GSTPFAGLAF+PGD FVFGSETRGL+ ERRE F Sbjct: 80 ANWEAFLRDAQPDP----ARMFALTTRGSTPFAGLAFQPGDWFVFGSETRGLSEERREWF 135 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 P SQRIRLPMRP NRS+NLSNTVAVVV+EAWRQNG+EGG+ Sbjct: 136 PPSQRIRLPMRPDNRSLNLSNTVAVVVFEAWRQNGFEGGA 175 >ref|YP_003753663.1| tRNA/rRNA methyltransferase (spoU) [Ralstonia solanacearum PSI07] emb|CBJ52404.1| putative tRNA/rRNA methyltransferase (spoU) [Ralstonia solanacearum PSI07] emb|CCA88676.1| putative tRNA/rRNA methyltransferase (spoU) [Ralstonia syzygii R24] Length = 175 Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 125/160 (78%), Positives = 141/160 (88%), Gaps = 4/160 (2%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +F+VVLVEPEIPPNTGN+IRLCANTGAQLHL+EPLGFPL+DA+MRRAGLDYHEYA M+VH Sbjct: 20 MFNVVLVEPEIPPNTGNVIRLCANTGAQLHLIEPLGFPLEDARMRRAGLDYHEYATMRVH 79 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 W+ FL + DP ARMFA+TT GSTPFAGLAF+PGD FVFGSETRGL+ ERR F Sbjct: 80 ASWEAFLRDAQPDP----ARMFALTTRGSTPFAGLAFQPGDWFVFGSETRGLSEERRAWF 135 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 P SQRIRLPMRP NRS+NLSNTVAVVV+EAWRQNG+EGG+ Sbjct: 136 PPSQRIRLPMRPDNRSLNLSNTVAVVVFEAWRQNGFEGGA 175 >gb|AEG70338.1| trna/rrna methyltransferase protein [Ralstonia solanacearum Po82] Length = 175 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 125/160 (78%), Positives = 141/160 (88%), Gaps = 4/160 (2%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +F+VVLVEPEIPPNTGN+IRLCANTGAQLHL+EPLGFPL+DA+MRRAGLDYHEYA M+VH Sbjct: 20 MFNVVLVEPEIPPNTGNVIRLCANTGAQLHLIEPLGFPLEDARMRRAGLDYHEYATMRVH 79 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 W+ FL + DP ARMFA+TT GSTPFA LAF+PGD FVFGSETRGL+ ERRE F Sbjct: 80 ADWEAFLRDAQPDP----ARMFALTTRGSTPFASLAFQPGDWFVFGSETRGLSEERREWF 135 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 P SQRIRLPMRP NRS+NLSNTVAVVV+EAWRQNG+EGG+ Sbjct: 136 PPSQRIRLPMRPDNRSLNLSNTVAVVVFEAWRQNGFEGGA 175 >ref|YP_724857.1| rRNA methylase (SpoU class) [Ralstonia eutropha H16] emb|CAJ91489.1| predicted rRNA methylase (SpoU class) [Ralstonia eutropha H16] Length = 156 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 124/160 (77%), Positives = 142/160 (88%), Gaps = 4/160 (2%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +F+VVLVEPEIPPNTGN+IRLCANTGAQLHLV+PLGFPL+DA+MRRAGLDYHEYA M+VH Sbjct: 1 MFNVVLVEPEIPPNTGNVIRLCANTGAQLHLVKPLGFPLEDARMRRAGLDYHEYATMRVH 60 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 + WD +A + DP ARMFA+TT GSTPF +AFRPGD FVFGSETRGL+PERR+ F Sbjct: 61 ESWDALMASEQPDP----ARMFALTTRGSTPFGEVAFRPGDWFVFGSETRGLSPERRDWF 116 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 P +QRIRLPMRP NRS+NLSNTVAVVV+EAWRQNG+EGGS Sbjct: 117 PPAQRIRLPMRPDNRSLNLSNTVAVVVFEAWRQNGFEGGS 156 >ref|YP_582412.1| putative rRNA methylase [Cupriavidus metallidurans CH34] gb|ABF07143.1| putative rRNA methylase [Cupriavidus metallidurans CH34] Length = 156 Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 123/160 (76%), Positives = 141/160 (88%), Gaps = 4/160 (2%) Query: 1 LFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH 60 +F+VVLVEPEIPPNTGN+IRLCANTGAQLHLV+PLGFPL+DA+MRRAGLDYHEYA M+VH Sbjct: 1 MFNVVLVEPEIPPNTGNVIRLCANTGAQLHLVKPLGFPLEDARMRRAGLDYHEYATMRVH 60 Query: 61 QGWDQFLAHRRQDPLFDEARMFAMTTHGSTPFAGLAFRPGDTFVFGSETRGLAPERRESF 120 + WD +A + DP RMFA+TTHGSTPF ++F PGD FVFGSETRGLAPERRE F Sbjct: 61 ESWDALMAAEQPDP----TRMFALTTHGSTPFGQVSFAPGDWFVFGSETRGLAPERREWF 116 Query: 121 PTSQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS 160 P++QRIRLPMRP NRS+NLSNTVAVVV+EAWRQNG+ GGS Sbjct: 117 PSAQRIRLPMRPNNRSLNLSNTVAVVVFEAWRQNGFAGGS 156