BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0168.p (304 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777542.1| amidophosphoribosyltransferase [Herbaspirill... 511 e-143 ref|YP_001101155.1| amidophosphoribosyltransferase [Herminiimona... 273 3e-71 ref|ZP_08273189.1| Competence protein F [Oxalobacteraceae bacter... 216 3e-54 ref|YP_004754652.1| competence protein F [Collimonas fungivorans... 214 2e-53 ref|YP_001354845.1| Comf family protein [Janthinobacterium sp. M... 208 9e-52 ref|ZP_04580054.1| amidophosphoribosyltransferase [Oxalobacter f... 190 2e-46 emb|CCD28762.1| Putative competence protein F-related protein (P... 185 6e-45 ref|ZP_02882705.1| putative competence protein F-related protein... 183 3e-44 ref|YP_003905570.1| phosphoribosyltransferase [Burkholderia sp. ... 181 1e-43 ref|ZP_04577906.1| gntX protein [Oxalobacter formigenes HOxBLS] ... 179 7e-43 >ref|YP_003777542.1| amidophosphoribosyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65634.1| amidophosphoribosyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 282/304 (92%), Positives = 288/304 (94%), Gaps = 5/304 (1%) Query: 1 MDRTSPKPATSQATSQATSPAKPATAAAAAKGTSSTSSTSSAGYRRAAAPAPKKNSGPHW 60 MDRTSPKPA+SQA+SQATS A A ++ TSSAGYRRAAAPAPKKNSGPHW Sbjct: 1 MDRTSPKPASSQASSQATS-----PAKPATAAAAAAKGTSSAGYRRAAAPAPKKNSGPHW 55 Query: 61 IKRLLARVPPLLPSACALCGAEGREILCAHCHKRFYTRQHRRCIQCAMPMPVTGKEVRCG 120 +KRLLARVPPLLPSACALCGAEGREILCA CHKRFYTRQHRRCIQCAMPMPVTGKE+RCG Sbjct: 56 LKRLLARVPPLLPSACALCGAEGREILCAPCHKRFYTRQHRRCIQCAMPMPVTGKELRCG 115 Query: 121 ACLKDRPAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSDVA 180 ACLKDRPAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSDVA Sbjct: 116 ACLKDRPAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSDVA 175 Query: 181 LPMPSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALPVG 240 LPMPSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALPVG Sbjct: 176 LPMPSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALPVG 235 Query: 241 ARARNVRSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFAR 300 ARARNVRSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFAR Sbjct: 236 ARARNVRSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFAR 295 Query: 301 TLPV 304 TLPV Sbjct: 296 TLPV 299 >ref|YP_001101155.1| amidophosphoribosyltransferase [Herminiimonas arsenicoxydans] emb|CAL63034.1| Putative amidophosphoribosyltransferase [Herminiimonas arsenicoxydans] Length = 247 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/245 (59%), Positives = 166/245 (67%), Gaps = 7/245 (2%) Query: 60 WIKRLLARVPPLLPSACALCGAEGREILCAHCHKRFYTRQHRRCIQCAMPMPVTGKEV-R 118 W + + +P LPS+CALCG R+ LC C +RF+ + RC+QCA P+P TG R Sbjct: 8 WSRHFIRHLPTALPSSCALCGFSSRQALCVDCEQRFFHQTPPRCLQCASPLPHTGALAQR 67 Query: 119 CGACLKDRPAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSD 178 CGACL D PAFDATIVA DY AP D L LALKFG L LAPL A ++ DA R P Sbjct: 68 CGACLGDPPAFDATIVAGDYAAPVDHLVLALKFGNRLALAPLFASMLRDAILREP----- 122 Query: 179 VALPMPSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALP 238 A MP+LL VPLG RL ERGFNQALEIAKPL+Q + +PL PQLLER ++T QS L Sbjct: 123 -AFAMPALLTAVPLGEKRLSERGFNQALEIAKPLAQAIAIPLAPQLLERTRDTLMQSMLH 181 Query: 239 VGARARNVRSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVF 298 R RN+R AF LP VRG HVG+VDDVMTTG TLNE+A LKRHGA RVTNLVF Sbjct: 182 PAERHRNMRHAFVLPANADVLVRGRHVGVVDDVMTTGVTLNEIAATLKRHGAVRVTNLVF 241 Query: 299 ARTLP 303 ART P Sbjct: 242 ARTPP 246 >ref|ZP_08273189.1| Competence protein F [Oxalobacteraceae bacterium IMCC9480] gb|EGF33333.1| Competence protein F [Oxalobacteraceae bacterium IMCC9480] Length = 210 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 120/213 (56%), Positives = 145/213 (68%), Gaps = 7/213 (3%) Query: 91 CHKRFYTRQHRRCIQCAMPMPVTGKEVRCGACLKDRPAFDATIVATDYFAPSDQLALALK 150 C +F+ RC CA+P V RCGACL++ PAFDATIVATDY P DQL LALK Sbjct: 4 CRLQFFRHTGSRCQCCALPCTVG---TRCGACLRNPPAFDATIVATDYQPPIDQLVLALK 60 Query: 151 FGGDLRLAPLLARLIHDASRRNPVPGSDVALPMPSLLAPVPLGRTRLQERGFNQALEIAK 210 FG L LA L L+ DA + + P L+APVPLG RL ERG+NQALEIA+ Sbjct: 61 FGAALPLARLFGDLLSDAQ----ITAAPDRRDWPDLIAPVPLGPQRLIERGYNQALEIAR 116 Query: 211 PLSQLMGLPLQPQLLERKKETEAQSALPVGARARNVRSAFALPFATMDQVRGLHVGIVDD 270 PL++ + LPL P+LL R +ET AQ+A+P R +N+ +AF +P M V G HVG+VDD Sbjct: 117 PLARSLTLPLSPRLLVRVRETGAQAAMPARQRHKNIHAAFVVPVQAMASVDGRHVGVVDD 176 Query: 271 VMTTGATLNEVAIVLKRHGARRVTNLVFARTLP 303 VMTTGATL+EVA LKR+GARRVTNLVFART P Sbjct: 177 VMTTGATLHEVAATLKRYGARRVTNLVFARTPP 209 >ref|YP_004754652.1| competence protein F [Collimonas fungivorans Ter331] gb|AAT42382.1| putative amidophosphoribosyltransferase [Collimonas fungivorans Ter331] gb|AEK63829.1| Competence protein F [Collimonas fungivorans Ter331] Length = 236 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 124/233 (53%), Positives = 159/233 (68%), Gaps = 5/233 (2%) Query: 72 LPSACALCGAEGREILCAHCHKRFYTRQHRRCIQCAMPMPVTGKE--VRCGACLKDRPAF 129 +PS CALCG G++++C C +++ + RCIQCA +P + CG CLK AF Sbjct: 5 MPSCCALCGRSGKQVICDGCSGHYFSGRPPRCIQCANRLPRLDGDNPALCGNCLKQARAF 64 Query: 130 DATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSDVALPMPSLLAP 189 DATIVA DY AP+D+L LALKFGG L LAP A+++ ASR PG LP +L Sbjct: 65 DATIVACDYTAPADRLVLALKFGGQLALAPAFAQMLFAASRIGVHPGQQPDLP--DILTA 122 Query: 190 VPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALP-VGARARNVRS 248 VPL RLQ+RGFNQALEIA+PL++L+GL LQ LL R+++T QS P + R RN+R Sbjct: 123 VPLSAQRLQQRGFNQALEIARPLARLLGLGLQHGLLLRQRDTLPQSLAPDLEQRRRNLRQ 182 Query: 249 AFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFART 301 AF +P A M Q+RG H+G+VDDVMTTG TL+ +A L+RHGA R+TN VFART Sbjct: 183 AFIVPPAAMMQIRGRHIGVVDDVMTTGETLHALAQTLRRHGASRITNFVFART 235 >ref|YP_001354845.1| Comf family protein [Janthinobacterium sp. Marseille] gb|ABR89423.1| Comf family protein [Janthinobacterium sp. Marseille] Length = 217 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 114/216 (52%), Positives = 141/216 (65%), Gaps = 9/216 (4%) Query: 60 WIKRLLARVPPLLPSACALCGAEGREILCAHCHKRFYTRQHRRCIQCAMPMPVTGKEVR- 118 W +R R+P LP++CALC G LCA C +F++R+ RC QCA P+ G+ R Sbjct: 8 WSRRCALRLPATLPTSCALCSIPGTSALCAPCRGQFFSRRPPRCTQCAYPL-THGEHARS 66 Query: 119 -CGACLKDRPAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGS 177 CG CL+ AFDATIVA DY AP D L LALKFG L LAPL A+LI DA R Sbjct: 67 FCGNCLRTPRAFDATIVAGDYSAPIDHLVLALKFGNQLALAPLFAQLIVDALLR------ 120 Query: 178 DVALPMPSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSAL 237 + A MP+++A VPLG RL ERGFNQALEIA+PLS+ + +PL PQL++R +ET QS+L Sbjct: 121 ERAFAMPTIMAAVPLGEKRLAERGFNQALEIARPLSKAIAIPLLPQLIQRSRETAMQSSL 180 Query: 238 PVGARARNVRSAFALPFATMDQVRGLHVGIVDDVMT 273 P AR N+R AF L D VRG H+ IVDDV+T Sbjct: 181 PPDARHHNMRDAFTLAPQAADLVRGQHIAIVDDVLT 216 >ref|ZP_04580054.1| amidophosphoribosyltransferase [Oxalobacter formigenes OXCC13] gb|EEO31027.1| amidophosphoribosyltransferase [Oxalobacter formigenes OXCC13] Length = 253 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 106/235 (45%), Positives = 144/235 (61%), Gaps = 9/235 (3%) Query: 72 LPSACALCGAEGREILCAHCHKRFYTRQHRRCIQCAMPMPV---TGKEVRCGACLKDRPA 128 +PS CALC ++ + +C C+ R+++ Q RC +CA +P + + CG C+K P+ Sbjct: 19 IPSPCALCHSDSNDGICDDCYHRYFSAQCPRCSRCANALPFHDPENENLLCGDCVKKLPS 78 Query: 129 FDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSDVALPMPSLLA 188 FD TIVA DY P DQL LKF +L +AP++ +LI A +N P P L Sbjct: 79 FDETIVAIDYEPPLDQLVHLLKFHANLTMAPIMGKLIVKAIGKNRRPVC------PDFLI 132 Query: 189 PVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALPVGARARNVRS 248 VPLG+ RL ERGFNQ+LEIAK LS+ + L L+ER +ETE QS + R +NVR+ Sbjct: 133 AVPLGKRRLIERGFNQSLEIAKTLSRSLKADLVFDLVERIRETEKQSTISFKERKKNVRN 192 Query: 249 AFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFARTLP 303 AF + + H+GI+DDVMTTG TL E+A +LK+ GA R+TN VFART P Sbjct: 193 AFGIVETNRHLIHNSHIGIIDDVMTTGETLEEIAALLKKAGAARITNFVFARTPP 247 >emb|CCD28762.1| Putative competence protein F-related protein (Phosphoribosyltransferase) [Candidatus Glomeribacter gigasporarum BEG34] Length = 260 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 114/238 (47%), Positives = 142/238 (59%), Gaps = 11/238 (4%) Query: 72 LPSACALCGAEGREILCAHCHKRFY---TRQHRRCIQCAMPMPV-----TGKEVRCGACL 123 LP CALC A E +C+ C + + + RC+QCA P+ + +G CG C+ Sbjct: 24 LPCRCALCDALSPEPVCSACMRAHWPAPSAVCARCVQCAYPLNIHTRLESGSAPLCGQCI 83 Query: 124 KDRPAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSDVALPM 183 PAFDAT+ DY AP D L ALKF L LAPL A+ + A+R +P D Sbjct: 84 AAPPAFDATLALADYAAPLDTLVAALKFRSKLALAPLFAQQL--ATRIHPA-FLDSRRSC 140 Query: 184 PSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALPVGARA 243 P L PVPL RL RG+NQA EIA+PL++++GL P LLER +T Q++LP AR Sbjct: 141 PDLTLPVPLSSRRLIARGYNQAWEIARPLARMLGLRAHPALLERIIDTPPQTSLPAKARR 200 Query: 244 RNVRSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFART 301 RN+R AFAL A VRG H+ +VDDVMT+GATL VA VLKR GA RVTN V RT Sbjct: 201 RNMRRAFALAHAHPAFVRGRHIAVVDDVMTSGATLESVARVLKRAGAARVTNWVVLRT 258 >ref|ZP_02882705.1| putative competence protein F-related protein [Burkholderia graminis C4D1M] gb|EDT11908.1| putative competence protein F-related protein [Burkholderia graminis C4D1M] Length = 233 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 112/239 (46%), Positives = 140/239 (58%), Gaps = 20/239 (8%) Query: 71 LLPSACALCGAEGREILCAHCHKRFYTRQHRRCIQCAMPMPVTGKEVR----CGACLKDR 126 +LP+ACALCG LC C + ++ RC CA+P+PVT + R CG C+ ++ Sbjct: 4 ILPNACALCGNLSHNALCGFCDESYWNEGALRCCVCAVPLPVTYRGRRASYCCGDCIAEK 63 Query: 127 PAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLAR----LIHDASRRNPVPGSDVALP 182 P FDAT DY AP D LA+ LKF L LA AR L HDA + +P Sbjct: 64 PPFDATFALADYRAPLDTLAVGLKFRAQLVLAREFARRLALLAHDAWQ-DPSE------- 115 Query: 183 MPSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALPVGAR 242 P L+APVPL RL++RG+NQA +IAKPL++ + +P LL R +T QS L + AR Sbjct: 116 CPDLIAPVPLADRRLRKRGYNQAWQIAKPLARALRVPHDATLLRRVIDTAPQSRLDLDAR 175 Query: 243 ARNVRSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFART 301 NV AF + V+GLHVGIVDDVMTTGATL +A LK GARRVTN V RT Sbjct: 176 RMNVGRAFEVA----GNVQGLHVGIVDDVMTTGATLEALARTLKAAGARRVTNFVALRT 230 >ref|YP_003905570.1| phosphoribosyltransferase [Burkholderia sp. CCGE1003] gb|ADN56279.1| phosphoribosyltransferase [Burkholderia sp. CCGE1003] Length = 233 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 112/235 (47%), Positives = 135/235 (57%), Gaps = 12/235 (5%) Query: 71 LLPSACALCGAEGREILCAHCHKRFYTRQHRRCIQCAMPMPVTGK----EVRCGACLKDR 126 LLP+ACALCG LCA C + ++ RC CA+P+PVT + RCG C + Sbjct: 4 LLPNACALCGNLSHRPLCAFCDESYWNDGALRCRVCAVPLPVTFRGRRTSYRCGDCSSEM 63 Query: 127 PAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSDVALPMPSL 186 P FDAT DY AP D LA+ LKF L LA AR + ++ SD P + Sbjct: 64 PPFDATFALADYRAPLDALAVGLKFRAQLMLAGEFARRLAHLAQDAWQDPSDC----PDV 119 Query: 187 LAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALPVGARARNV 246 +APVPL R RL ERG+NQA +IA+PL++ + +P LL R ET QS L + AR NV Sbjct: 120 IAPVPLARRRLIERGYNQAWQIARPLARALRVPADATLLRRVIETAPQSRLDLDARRMNV 179 Query: 247 RSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVFART 301 AF L V LHVGIVDDVMTTGATL +A LK GARRVTN V RT Sbjct: 180 GRAFQL----TRNVERLHVGIVDDVMTTGATLEALARTLKAAGARRVTNFVALRT 230 >ref|ZP_04577906.1| gntX protein [Oxalobacter formigenes HOxBLS] gb|EEO28868.1| gntX protein [Oxalobacter formigenes HOxBLS] Length = 199 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 94/185 (50%), Positives = 122/185 (65%), Gaps = 4/185 (2%) Query: 119 CGACLKDRPAFDATIVATDYFAPSDQLALALKFGGDLRLAPLLARLIHDASRRNPVPGSD 178 CG CL+ P+FD T+VA +Y P DQL LKF L LAPL+ +LI+ A+ ++ G Sbjct: 13 CGECLEHTPSFDETVVAVNYEPPLDQLVHLLKFQYRLALAPLMGKLIYQATVKS---GRS 69 Query: 179 VALPMPSLLAPVPLGRTRLQERGFNQALEIAKPLSQLMGLPLQPQLLERKKETEAQSALP 238 L P + VPLG+TRL ERGFNQ+ EIAK L++LM +PL L+ R +ETE QS + Sbjct: 70 SGL-RPDFIIAVPLGKTRLIERGFNQSHEIAKKLAKLMKIPLLSDLVYRNRETEKQSTVS 128 Query: 239 VGARARNVRSAFALPFATMDQVRGLHVGIVDDVMTTGATLNEVAIVLKRHGARRVTNLVF 298 R +NV +AF L ++ H+GIVDDVMTTG TL E+A +LK+ GA+RVTN VF Sbjct: 129 FQERKKNVHNAFDLAETGRFSIKEKHIGIVDDVMTTGHTLEEIARLLKKSGAKRVTNFVF 188 Query: 299 ARTLP 303 ARTLP Sbjct: 189 ARTLP 193