BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0163.p (190 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777537.1| cytochrome C oxidase assembly transmembrane ... 396 e-109 ref|YP_004751216.1| cytochrome oxidase biogenesis protein Cox11-... 322 1e-86 ref|YP_001354840.1| cytochrome c oxidase subunit XI assembly pro... 281 3e-74 ref|YP_001101150.1| cytochrome C oxidase assembly protein [Hermi... 273 8e-72 ref|YP_003753656.1| cytochrome C oxidase assembly protein CtaG/C... 257 5e-67 emb|CCA80512.1| cytochrome c oxidase assembly protein CtaG/Cox11... 257 6e-67 emb|CAQ56660.1| cytochrome c oxidase assembly protein [Ralstonia... 256 1e-66 ref|NP_518486.1| cytochrome C oxidase assembly protein [Ralstoni... 256 1e-66 ref|YP_003746883.1| cytochrome C oxidase assembly protein ctag/c... 256 1e-66 ref|ZP_00943903.1| CtaG [Ralstonia solanacearum UW551] >gi|20774... 256 1e-66 >ref|YP_003777537.1| cytochrome C oxidase assembly transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65629.1| cytochrome C oxidase assembly transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 190 Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MSQHDDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVT 60 MSQHDDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVT Sbjct: 1 MSQHDDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVT 60 Query: 61 VEAPANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDA 120 VEAPANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDA Sbjct: 61 VEAPANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDA 120 Query: 121 QAIPSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFF 180 QAIPSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFF Sbjct: 121 QAIPSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFF 180 Query: 181 EINGKDKTAG 190 EINGKDKTAG Sbjct: 181 EINGKDKTAG 190 >ref|YP_004751216.1| cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 [Collimonas fungivorans Ter331] gb|AEK60393.1| Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 [Collimonas fungivorans Ter331] Length = 193 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 150/179 (83%), Positives = 163/179 (91%) Query: 12 EERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEAPANTQIDK 71 E R LN+ ML KLLV+AVLMFGFGY L+PVY+KICEVTGVNFLTPKD TVEAPANTQ+DK Sbjct: 15 ESRKLNKQMLGKLLVIAVLMFGFGYGLVPVYKKICEVTGVNFLTPKDATVEAPANTQVDK 74 Query: 72 SRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAIPSYAPQQS 131 SRTITVEFDGN+QGPWRFRPTV+S+QVHPGEMTQV YEVVN QSR +DAQAIPSYAPQQ+ Sbjct: 75 SRTITVEFDGNSQGPWRFRPTVSSLQVHPGEMTQVVYEVVNKQSRKMDAQAIPSYAPQQA 134 Query: 132 AAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEINGKDKTAG 190 AAFFKKVECFCFTQQTLGPNQAK+MPVVFYIDP +PKDV ITLSYTFFEI G+ AG Sbjct: 135 AAFFKKVECFCFTQQTLGPNQAKEMPVVFYIDPAIPKDVKLITLSYTFFEIAGQPDKAG 193 >ref|YP_001354840.1| cytochrome c oxidase subunit XI assembly protein [Janthinobacterium sp. Marseille] gb|ABR88511.1| cytochrome c oxidase subunit XI assembly protein [Janthinobacterium sp. Marseille] Length = 199 Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 128/185 (69%), Positives = 156/185 (84%) Query: 5 DDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEAP 64 ++ +DQ+ LN M KL+V+AV+MFGFGY L+P+Y++ICE+TGVN LT +++ V+ Sbjct: 2 ENQTEDQKHSKLNTQMFGKLVVIAVMMFGFGYLLVPIYKQICEITGVNILTSQEMKVKPI 61 Query: 65 ANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAIP 124 N+Q+DKSRTITVEFD N QGP+RFRPTV SMQVHPGEM Q+ YEVVNTQ+R+V+AQAIP Sbjct: 62 DNSQVDKSRTITVEFDANTQGPFRFRPTVNSMQVHPGEMAQIVYEVVNTQARSVEAQAIP 121 Query: 125 SYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEING 184 SYAPQQ+AA FKKVECFCF QQTL +QAKQMPVVFY+DP LPKDV TITLSYTFFEI G Sbjct: 122 SYAPQQAAAHFKKVECFCFQQQTLEASQAKQMPVVFYLDPALPKDVKTITLSYTFFEIAG 181 Query: 185 KDKTA 189 ++K A Sbjct: 182 REKKA 186 >ref|YP_001101150.1| cytochrome C oxidase assembly protein [Herminiimonas arsenicoxydans] emb|CAL63029.1| Cytochrome c oxidase assembly protein CtaG [Herminiimonas arsenicoxydans] Length = 192 Score = 273 bits (698), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 127/181 (70%), Positives = 152/181 (83%) Query: 9 QDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEAPANTQ 68 Q + LN M KL V+AV+MFGFGY L+P+Y++ICE+TGVN LT +++ V+ N+Q Sbjct: 4 QTESTGKLNGRMFGKLAVIAVMMFGFGYLLVPIYKQICELTGVNILTSQEMKVKPIDNSQ 63 Query: 69 IDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAIPSYAP 128 IDKSRTITVEFD N GP+RFRPTV+SMQVHPGEM+QV YEVVNTQ+R+V+AQAIPSYAP Sbjct: 64 IDKSRTITVEFDANTTGPFRFRPTVSSMQVHPGEMSQVLYEVVNTQARSVEAQAIPSYAP 123 Query: 129 QQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEINGKDKT 188 QQ+AA FKKVECFCF Q+TLGPNQAKQMPVVFY+DP LP+DV TITLSYTFFE+ +K Sbjct: 124 QQAAAHFKKVECFCFQQETLGPNQAKQMPVVFYLDPALPRDVKTITLSYTFFEVAKPEKQ 183 Query: 189 A 189 A Sbjct: 184 A 184 >ref|YP_003753656.1| cytochrome C oxidase assembly protein CtaG/Cox11 [Ralstonia solanacearum PSI07] emb|CBJ52398.1| Cytochrome c oxidase assembly protein CtaG/Cox11 [Ralstonia solanacearum PSI07] Length = 202 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 118/179 (65%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICEVT +N LT +D+ A Sbjct: 9 DPTDDAKVAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEVTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R+V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVKNSMEVHPGEINQIVYEVVNKEGRSVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEI 182 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPNLPKDVKTITLSYTFFEI 187 >emb|CCA80512.1| cytochrome c oxidase assembly protein CtaG/Cox11 [blood disease bacterium R229] emb|CCA88683.1| cytochrome c oxidase assembly protein CtaG/Cox11 [Ralstonia syzygii R24] Length = 202 Score = 257 bits (656), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 118/180 (65%), Positives = 145/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICEVT +N LT +D+ A Sbjct: 9 DPTDDAKVAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEVTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R+V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVKNSMEVHPGEINQIVYEVVNKEGRSVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >emb|CAQ56660.1| cytochrome c oxidase assembly protein [Ralstonia solanacearum MolK2] Length = 202 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICEVT +N LT +D+ A Sbjct: 9 DPTDDTKIAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEVTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVRNSMEVHPGEINQIVYEVVNKEGRQVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >ref|NP_518486.1| cytochrome C oxidase assembly protein [Ralstonia solanacearum GMI1000] emb|CAD13893.1| probable cytochrome c oxidase assembly transmembrane protein [Ralstonia solanacearum GMI1000] Length = 202 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D ERGLNR ML KL VV V+MFGFGYA++P+Y+KICE+T +N LT +D+ A Sbjct: 9 DPTDDARAAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICELTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R+V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVKNSMEVHPGEINQIVYEVVNKEGRSVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >ref|YP_003746883.1| cytochrome C oxidase assembly protein ctag/cox11 [Ralstonia solanacearum CFBP2957] emb|CBJ44300.1| Cytochrome c oxidase assembly protein CtaG/Cox11 [Ralstonia solanacearum CFBP2957] Length = 202 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICEVT +N LT +D+ A Sbjct: 9 DPSDDTKTAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEVTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVRNSMEVHPGEINQIVYEVVNKEGRQVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >ref|ZP_00943903.1| CtaG [Ralstonia solanacearum UW551] ref|YP_002258602.1| cytochrome c oxidase assembly protein [Ralstonia solanacearum IPO1609] gb|EAP73572.1| CtaG [Ralstonia solanacearum UW551] emb|CAQ60525.1| cytochrome c oxidase assembly protein [Ralstonia solanacearum IPO1609] Length = 202 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICE+T +N LT +D+ A Sbjct: 9 DPTDDTKTAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEITNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVRNSMEVHPGEINQIVYEVVNKEGRQVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188