BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0060.p (161 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777396.1| MarR family transcription regulator protein ... 322 1e-86 ref|YP_002908322.1| MarR family transcriptional regulator [Burkh... 140 9e-32 ref|YP_001565550.1| MarR family transcriptional regulator [Delft... 133 8e-30 ref|YP_004487658.1| MarR family transcriptional regulator [Delft... 132 2e-29 emb|CBA32368.1| hypothetical protein Csp_D31790 [Curvibacter put... 131 3e-29 ref|ZP_03268237.1| transcriptional regulator, MarR family [Burkh... 131 4e-29 ref|YP_004157341.1| MarR family transcriptional regulator [Vario... 127 5e-28 ref|YP_004619620.1| MarR family transcriptional regulator [Ramli... 125 2e-27 ref|YP_981047.1| MarR family transcriptional regulator [Polaromo... 125 3e-27 ref|YP_521551.1| MarR family transcriptional regulator [Rhodofer... 124 4e-27 >ref|YP_003777396.1| MarR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65488.1| MarR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 161 Score = 322 bits (824), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 1 MLPKKPADFDSDDDAASSAPLDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFT 60 MLPKKPADFDSDDDAASSAPLDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFT Sbjct: 1 MLPKKPADFDSDDDAASSAPLDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFT 60 Query: 61 VLSLLKANPDINQKRLSKAINVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAG 120 VLSLLKANPDINQKRLSKAINVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAG Sbjct: 61 VLSLLKANPDINQKRLSKAINVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAG 120 Query: 121 LRMCTKAEQTAIELELKATEMLSDAERAQLIGLLQKMFLPQ 161 LRMCTKAEQTAIELELKATEMLSDAERAQLIGLLQKMFLPQ Sbjct: 121 LRMCTKAEQTAIELELKATEMLSDAERAQLIGLLQKMFLPQ 161 >ref|YP_002908322.1| MarR family transcriptional regulator [Burkholderia glumae BGR1] gb|ACR31087.1| Transcriptional regulator, MarR family [Burkholderia glumae BGR1] Length = 157 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 78/157 (49%), Positives = 102/157 (64%), Gaps = 2/157 (1%) Query: 2 LPKKPADFDSDDDAASSAPLDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFTV 61 + K +S DD A +DQ LL L+GYN RRAY+ I F+ +M K ELR DF V Sbjct: 1 MSTKSVSNNSADDLADR--VDQSELLDLLGYNIRRAYLVIQSTFDAQMEKLELRQADFAV 58 Query: 62 LSLLKANPDINQKRLSKAINVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAGL 121 LS L+ NP INQK L+ A+ ++PPNLATLLDRLE RGL+ RQR+ DRR Q ++LT G Sbjct: 59 LSTLRHNPGINQKALADALAIAPPNLATLLDRLESRGLLTRQRSLDDRRIQHVSLTPQGT 118 Query: 122 RMCTKAEQTAIELELKATEMLSDAERAQLIGLLQKMF 158 R+ +A ++A + + A +MLS A R QL LL K+F Sbjct: 119 RLHGQALKSAQKADEVAVQMLSGAGREQLKSLLTKIF 155 >ref|YP_001565550.1| MarR family transcriptional regulator [Delftia acidovorans SPH-1] gb|ABX37165.1| transcriptional regulator, MarR family [Delftia acidovorans SPH-1] Length = 166 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 72/158 (45%), Positives = 105/158 (66%), Gaps = 4/158 (2%) Query: 5 KPADFDSDDDAASSA----PLDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFT 60 KPA + + +S+A +D L +LVGYN RRA ++I+ +F +RMA +L+ V+F+ Sbjct: 8 KPAPAEENTAPSSTAAPGPSIDASFLHTLVGYNARRASLSIIEVFVERMATHDLKMVEFS 67 Query: 61 VLSLLKANPDINQKRLSKAINVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAG 120 VLSL+ NP I ++L A++V PPNL L+ LE+R L+ R+ +P DRR+ + LT AG Sbjct: 68 VLSLVSHNPGITSRQLCAALDVMPPNLVGLIAALERRKLIERRTHPTDRRAVGVHLTPAG 127 Query: 121 LRMCTKAEQTAIELELKATEMLSDAERAQLIGLLQKMF 158 + +AE+TA ELEL AT L+DAER LI LLQK++ Sbjct: 128 AELTARAERTAAELELDATYRLTDAERRTLIQLLQKIY 165 >ref|YP_004487658.1| MarR family transcriptional regulator [Delftia sp. Cs1-4] gb|AEF89303.1| transcriptional regulator, MarR family [Delftia sp. Cs1-4] Length = 166 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/157 (44%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 3 PKKPADFDSDDDAASSAP-LDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFTV 61 P A+ + A+ P +D L +LVGYN RRA ++I+ +F +RMA +L+ V+F+V Sbjct: 9 PAPAAENTAPSSTAAPGPSIDASFLHTLVGYNARRASLSIIEVFVERMATHDLKMVEFSV 68 Query: 62 LSLLKANPDINQKRLSKAINVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAGL 121 LSL+ NP I ++L A++V PPNL L+ LE+R L+ R+ +P DRR+ + LT AG Sbjct: 69 LSLVSHNPGITSRQLCAALDVMPPNLVGLIAALERRKLIERRTHPTDRRAVGVHLTPAGA 128 Query: 122 RMCTKAEQTAIELELKATEMLSDAERAQLIGLLQKMF 158 + +AE+TA ELE+ AT L+DAER LI LLQK++ Sbjct: 129 ELTARAERTAAELEMDATYRLTDAERRTLIQLLQKIY 165 >emb|CBA32368.1| hypothetical protein Csp_D31790 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 142 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/140 (48%), Positives = 94/140 (67%) Query: 21 LDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFTVLSLLKANPDINQKRLSKAI 80 +D L +LVGYN RRA + I+ F RMA ++L+ VDF+VLSL+ NP I ++L A+ Sbjct: 1 MDTSYLRTLVGYNARRASLAIIESFMVRMAPYDLKVVDFSVLSLVAHNPGITSRQLCAAL 60 Query: 81 NVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAGLRMCTKAEQTAIELELKATE 140 NV PPNL L+ LE+RGL+ R +P D R+ + LT GL + +AE+TA +LE+ AT Sbjct: 61 NVLPPNLVGLIATLERRGLIERLPHPSDGRAMGVHLTPQGLELMVQAEKTAFDLEMDATS 120 Query: 141 MLSDAERAQLIGLLQKMFLP 160 L+DAER LI LLQK++ P Sbjct: 121 RLTDAERKTLIRLLQKVYTP 140 >ref|ZP_03268237.1| transcriptional regulator, MarR family [Burkholderia sp. H160] gb|EEA00168.1| transcriptional regulator, MarR family [Burkholderia sp. H160] Length = 157 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/138 (49%), Positives = 92/138 (66%) Query: 21 LDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFTVLSLLKANPDINQKRLSKAI 80 +DQ LL L+GYN RR Y+ + F+ +M + ELR DF VLS L+ NP INQK L+ A+ Sbjct: 18 VDQSELLDLLGYNIRRTYLVVQSTFDAQMEELELRQADFAVLSTLRHNPGINQKSLADAL 77 Query: 81 NVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAGLRMCTKAEQTAIELELKATE 140 ++PPNLATLLDRLE GL+ RQR+ D+R Q ++LT G R+ ++A + A + + A Sbjct: 78 AIAPPNLATLLDRLESGGLLTRQRSTADKRIQHVSLTPQGTRLHSQALKAAQKADGAAVH 137 Query: 141 MLSDAERAQLIGLLQKMF 158 LS AER QL LL K+F Sbjct: 138 KLSAAERQQLKSLLAKIF 155 >ref|YP_004157341.1| MarR family transcriptional regulator [Variovorax paradoxus EPS] gb|ADU39230.1| transcriptional regulator, MarR family [Variovorax paradoxus EPS] Length = 163 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 5/163 (3%) Query: 2 LPKKPADFDSDDDAASSAP-----LDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRP 56 +P + ++ A+SAP LD ++L +LVGYN RRA++ I +F +RMA + L+ Sbjct: 1 MPAPAKKTSTKNEPAASAPGRSDRLDARVLETLVGYNARRAWLIISSVFSERMAPYGLKQ 60 Query: 57 VDFTVLSLLKANPDINQKRLSKAINVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLAL 116 +DF+VLSLL NP ++L +++ PPNL +L+ L+ RGL+ R+ +P D R+ L L Sbjct: 61 IDFSVLSLLAHNPGATSRQLCTTLDILPPNLVSLVATLDSRGLIERRPHPHDGRAVGLHL 120 Query: 117 TTAGLRMCTKAEQTAIELELKATEMLSDAERAQLIGLLQKMFL 159 T+AG + AEQT ++LE A+ L+ ER LI LLQK++L Sbjct: 121 TSAGEALVRDAEQTVVQLEADASAQLTARERETLIKLLQKIYL 163 >ref|YP_004619620.1| MarR family transcriptional regulator [Ramlibacter tataouinensis TTB310] gb|AEG93601.1| transcriptional regulator, MarR family-like protein [Ramlibacter tataouinensis TTB310] Length = 170 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/139 (45%), Positives = 96/139 (69%) Query: 21 LDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFTVLSLLKANPDINQKRLSKAI 80 +D L SL+GYN RRA + ++ +F +RMA+++LRPVDF+VLSL+ NP I ++L A+ Sbjct: 32 VDTTYLESLLGYNARRAALAVIEVFLERMARYQLRPVDFSVLSLITHNPGITSRQLCAAL 91 Query: 81 NVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAGLRMCTKAEQTAIELELKATE 140 + PPNL ++ LE+R L++R+ +P+D R+ L LT AG ++ AE+TA ELE + Sbjct: 92 GILPPNLVGMVGALEKRELIVRKPHPRDGRAMGLHLTPAGQKLMQGAERTAAELEGEVAT 151 Query: 141 MLSDAERAQLIGLLQKMFL 159 LS AE+ LI LL+K++L Sbjct: 152 RLSPAEQKTLIRLLKKIYL 170 >ref|YP_981047.1| MarR family transcriptional regulator [Polaromonas naphthalenivorans CJ2] gb|ABM36126.1| transcriptional regulator, MarR family [Polaromonas naphthalenivorans CJ2] Length = 197 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/140 (44%), Positives = 92/140 (65%) Query: 21 LDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFTVLSLLKANPDINQKRLSKAI 80 +D L +L+GYN RRA + ++ F RMA+F LRPV+F+VL+L+ NP I ++L + Sbjct: 56 MDTSFLETLIGYNARRAALVVIAEFLPRMAQFGLRPVEFSVLTLIGHNPGITSRQLCATL 115 Query: 81 NVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAGLRMCTKAEQTAIELELKATE 140 ++ PPNL ++ LE+ G++ ++ +P DRR+Q L LT G AEQTA +E+ AT Sbjct: 116 DILPPNLVGMIKHLEKLGMLEKRDHPTDRRAQGLHLTETGKATLPLAEQTASAIEIDATS 175 Query: 141 MLSDAERAQLIGLLQKMFLP 160 LS AER LI LL+K++LP Sbjct: 176 RLSQAERKTLISLLRKVYLP 195 >ref|YP_521551.1| MarR family transcriptional regulator [Rhodoferax ferrireducens T118] gb|ABD68020.1| transcriptional regulator, MarR family [Rhodoferax ferrireducens T118] Length = 151 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/138 (47%), Positives = 90/138 (65%) Query: 21 LDQQLLLSLVGYNCRRAYITIMPLFEKRMAKFELRPVDFTVLSLLKANPDINQKRLSKAI 80 +D L +L+GYN RRA + I+ +F +RMAK+ELRPVDF+VLSL+ NP I ++L A+ Sbjct: 13 VDTSYLETLMGYNSRRAALAIIGVFLERMAKYELRPVDFSVLSLVSHNPGITSRQLCNAL 72 Query: 81 NVSPPNLATLLDRLEQRGLVLRQRNPQDRRSQVLALTTAGLRMCTKAEQTAIELELKATE 140 V PNL ++ LE+RGL+ R +P D R+ L LT G + AE+TA +LE T Sbjct: 73 GVLAPNLVGMVTALEKRGLITRCPHPHDGRAMGLHLTEDGKTLLKAAEETASKLEFDCTP 132 Query: 141 MLSDAERAQLIGLLQKMF 158 LS AER LI LL+K++ Sbjct: 133 NLSSAERKTLIRLLKKIY 150