BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0047.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777384.1| branched-chain amino acid ABC transporter pe... 790 0.0 emb|CAP19688.1| periplasmic component protein [Herbaspirillum se... 786 0.0 ref|YP_298217.1| extracellular ligand-binding receptor [Ralstoni... 612 e-173 ref|YP_586906.1| ABC transporter substrate binding protein [Cupr... 610 e-173 ref|YP_001900015.1| extracellular ligand-binding receptor [Ralst... 604 e-171 ref|ZP_07676429.1| amino acid ABC transporter, periplasmic amino... 604 e-171 ref|YP_003751833.1| substrate-binding periplasmic abc transporte... 591 e-167 ref|NP_520365.1| substrate-binding periplasmic ABC transporter p... 590 e-166 emb|CCA84602.1| putative substrate-binding periplasmic abc trans... 590 e-166 emb|CCA79530.1| putative substrate-binding periplasmic abc trans... 588 e-166 >ref|YP_003777384.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65476.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 391 Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/391 (99%), Positives = 391/391 (100%) Query: 1 MRFKKIALLAVMAASGGLLASLAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG 60 MRFKKIALLAVMAASGGLLASLAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG Sbjct: 1 MRFKKIALLAVMAASGGLLASLAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG 60 Query: 61 DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK 120 DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK Sbjct: 61 DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK 120 Query: 121 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET 180 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET Sbjct: 121 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET 180 Query: 181 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE 240 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE Sbjct: 181 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE 240 Query: 241 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG 300 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG Sbjct: 241 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG 300 Query: 301 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV 360 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV Sbjct: 301 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV 360 Query: 361 QTVYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 QTVYVRKVEKIG+EAYNVEFDKFENMKDTGK Sbjct: 361 QTVYVRKVEKIGNEAYNVEFDKFENMKDTGK 391 >emb|CAP19688.1| periplasmic component protein [Herbaspirillum seropedicae] Length = 391 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/391 (99%), Positives = 390/391 (99%) Query: 1 MRFKKIALLAVMAASGGLLASLAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG 60 MRFKKIALLAVMAASGGLLASLAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG Sbjct: 1 MRFKKIALLAVMAASGGLLASLAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG 60 Query: 61 DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK 120 DQVAGKKIQIIIKDTTGPSPEIAKRLA ELVVREKVDFLAGFGLTPEALAVAPIAEQAKK Sbjct: 61 DQVAGKKIQIIIKDTTGPSPEIAKRLAPELVVREKVDFLAGFGLTPEALAVAPIAEQAKK 120 Query: 121 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET 180 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET Sbjct: 121 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET 180 Query: 181 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE 240 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE Sbjct: 181 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE 240 Query: 241 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG 300 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG Sbjct: 241 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG 300 Query: 301 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV 360 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV Sbjct: 301 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV 360 Query: 361 QTVYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 QTVYVRKVEKIG+EAYNVEFDKFENMKDTGK Sbjct: 361 QTVYVRKVEKIGNEAYNVEFDKFENMKDTGK 391 >ref|YP_298217.1| extracellular ligand-binding receptor [Ralstonia eutropha JMP134] gb|AAZ63373.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Ralstonia eutropha JMP134] Length = 391 Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust. Identities = 285/365 (78%), Positives = 328/365 (89%) Query: 27 ETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHGDQVAGKKIQIIIKDTTGPSPEIAKRL 86 + IK+GLIA FSG FADYGKQME G+KAY + HGD VAG+K+Q+I+KDTTGP P++AKRL Sbjct: 27 DPIKIGLIAPFSGSFADYGKQMEAGVKAYQSLHGDTVAGRKVQVIMKDTTGPVPDVAKRL 86 Query: 87 AQELVVREKVDFLAGFGLTPEALAVAPIAEQAKKPMIIMNAATSVITTKSNYIARFSMTL 146 AQELVVR+KVD LAGFGLTPEALAVAP+AEQAKK M+I NAA+SVITTKSNYIAR SMTL Sbjct: 87 AQELVVRDKVDILAGFGLTPEALAVAPVAEQAKKAMVIFNAASSVITTKSNYIARVSMTL 146 Query: 147 PQVSGPMATWALKNGIKRVVTLVADYGPGIDAETAFKTNLLGGGGQVLESIRVPLRNPEF 206 PQ+S PMATWA+KN +++VVTLVADY PGIDAETAFKTN +GGGGQ++ESIRVPLRNPEF Sbjct: 147 PQISAPMATWAVKNNVRKVVTLVADYAPGIDAETAFKTNFIGGGGQIIESIRVPLRNPEF 206 Query: 207 APYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRERGLAEAGIKVIATGDLTDDHVMPAMG 266 AP+IQRIKDAKPEAVF+F+PAGEQ +AFMKG+RERGLAEAGI+VIATGDLTDDHV+PAMG Sbjct: 207 APFIQRIKDAKPEAVFLFLPAGEQGVAFMKGFRERGLAEAGIRVIATGDLTDDHVLPAMG 266 Query: 267 ESTLGVITTFHYSAAHDSPENKAFLKSFAAANPGAGRPNFMAVAAYDGMNAIYEVSKKLN 326 +STLGVIT+FHYS AHDS ENKAFL +++AANPGAGRPNFM VAAYDGM AIYE KK N Sbjct: 267 DSTLGVITSFHYSMAHDSRENKAFLSAYSAANPGAGRPNFMTVAAYDGMAAIYEALKKTN 326 Query: 327 GKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIVQTVYVRKVEKIGSEAYNVEFDKFENM 386 G DGD+ + LK MK SPRGPI IDPATRD++QTVY+RKVEK GSE YN+EFDKF ++ Sbjct: 327 GATDGDKIIGALKGMKIMSPRGPIMIDPATRDVIQTVYIRKVEKRGSELYNIEFDKFADV 386 Query: 387 KDTGK 391 KD+GK Sbjct: 387 KDSGK 391 >ref|YP_586906.1| ABC transporter substrate binding protein [Cupriavidus metallidurans CH34] gb|ABF11637.1| putative ABC transporter substrate binding protein [Cupriavidus metallidurans CH34] Length = 393 Score = 610 bits (1574), Expect = e-173, Method: Compositional matrix adjust. Identities = 287/370 (77%), Positives = 330/370 (89%) Query: 22 LAQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHGDQVAGKKIQIIIKDTTGPSPE 81 L A + +K+GLIA FSG FADYGKQMEGGIKA+ +GD VAG+KI++I+KDTTGP PE Sbjct: 24 LTLAADPVKIGLIAPFSGSFADYGKQMEGGIKAWQKLNGDVVAGRKIEVIMKDTTGPVPE 83 Query: 82 IAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKKPMIIMNAATSVITTKSNYIAR 141 +AKRLAQELVVR+KVD LAGFGLTPEALAVAP+AEQAKKPM+I NAA+SVITTKSNYI R Sbjct: 84 VAKRLAQELVVRDKVDILAGFGLTPEALAVAPVAEQAKKPMVIFNAASSVITTKSNYITR 143 Query: 142 FSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAETAFKTNLLGGGGQVLESIRVPL 201 SMTLPQ+S PMATWA++N +++VVTLVADY PGIDAETAFKTN LGGGGQ++ESIRVPL Sbjct: 144 VSMTLPQISAPMATWAVRNNVRKVVTLVADYAPGIDAETAFKTNFLGGGGQIVESIRVPL 203 Query: 202 RNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRERGLAEAGIKVIATGDLTDDHV 261 RNPEFAP+IQRIKDAKPEAVF+F+PAGEQ +AFMKG+RERGLA+AGI+VIATGDLTDDHV Sbjct: 204 RNPEFAPFIQRIKDAKPEAVFLFLPAGEQGVAFMKGFRERGLADAGIRVIATGDLTDDHV 263 Query: 262 MPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPGAGRPNFMAVAAYDGMNAIYEV 321 +PAMG++TLGVIT+FHYSAAHDS ENKAFLK+FA ANPGAGRPNFMAVAAYDGM AIY+ Sbjct: 264 LPAMGDATLGVITSFHYSAAHDSKENKAFLKAFADANPGAGRPNFMAVAAYDGMAAIYDA 323 Query: 322 SKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIVQTVYVRKVEKIGSEAYNVEFD 381 KK NG DGD+ + LK MK SPRG I IDPATRD+VQTVY+RKVEK+ E YNVEFD Sbjct: 324 LKKTNGATDGDKLVGALKGMKLQSPRGAITIDPATRDVVQTVYIRKVEKVNGELYNVEFD 383 Query: 382 KFENMKDTGK 391 KF+ +KD+GK Sbjct: 384 KFDGVKDSGK 393 >ref|YP_001900015.1| extracellular ligand-binding receptor [Ralstonia pickettii 12J] ref|YP_002982007.1| extracellular ligand-binding receptor [Ralstonia pickettii 12D] gb|ACD27583.1| Extracellular ligand-binding receptor [Ralstonia pickettii 12J] gb|ACS63335.1| Extracellular ligand-binding receptor [Ralstonia pickettii 12D] Length = 388 Score = 604 bits (1557), Expect = e-171, Method: Compositional matrix adjust. Identities = 289/389 (74%), Positives = 337/389 (86%), Gaps = 3/389 (0%) Query: 4 KKIALLAVMAASGGLLASL-AQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHGDQ 62 ++ LL V+A G L+ L A A E IK+GLIA FSGPFADYGKQME GIKAY HG Sbjct: 2 RRRVLLTVVA--GTLMTGLPAFADEPIKIGLIAPFSGPFADYGKQMEDGIKAYQRLHGTT 59 Query: 63 VAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKKPM 122 G+++QII+KDTTGP P++AKRLAQELVVR+KVDFLAGFGLTPEALAVAPIA+QAKKPM Sbjct: 60 AGGRQVQIIVKDTTGPVPDVAKRLAQELVVRDKVDFLAGFGLTPEALAVAPIAQQAKKPM 119 Query: 123 IIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAETAF 182 +I NAA+S ITTKS+Y+ R SMTLPQ+S P+A+WALKNGIK+V T+VADY PGIDAE AF Sbjct: 120 VIFNAASSSITTKSDYVTRVSMTLPQISTPIASWALKNGIKQVATVVADYAPGIDAENAF 179 Query: 183 KTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRERG 242 K GGGQV+E++RVPLRNPEFAP+IQR+KDAKP+AVF+F+PAGEQ +AFMKG+RERG Sbjct: 180 KQTFTAGGGQVVEAVRVPLRNPEFAPFIQRVKDAKPQAVFVFLPAGEQGVAFMKGFRERG 239 Query: 243 LAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPGAG 302 LA+AGIKVIATGDLTDDHV+PAMG++TLGVIT+FHYSAAHDSP+NK FLK+FA ANPGAG Sbjct: 240 LAQAGIKVIATGDLTDDHVLPAMGDATLGVITSFHYSAAHDSPQNKTFLKAFAEANPGAG 299 Query: 303 RPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIVQT 362 RPNFMAVAAYDG+ AIY V KL GKIDG++AMA K MK SPRGPI IDPATRD+VQT Sbjct: 300 RPNFMAVAAYDGIGAIYNVINKLGGKIDGEKAMAAFKGMKIDSPRGPITIDPATRDVVQT 359 Query: 363 VYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 VY+RKVEK+G+E YNVEFDKF ++KD GK Sbjct: 360 VYIRKVEKVGNELYNVEFDKFADVKDPGK 388 >ref|ZP_07676429.1| amino acid ABC transporter, periplasmic amino-acid binding protein [Ralstonia sp. 5_7_47FAA] gb|EFP65001.1| amino acid ABC transporter, periplasmic amino-acid binding protein [Ralstonia sp. 5_7_47FAA] Length = 392 Score = 604 bits (1557), Expect = e-171, Method: Compositional matrix adjust. Identities = 289/389 (74%), Positives = 337/389 (86%), Gaps = 3/389 (0%) Query: 4 KKIALLAVMAASGGLLASL-AQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHGDQ 62 ++ LL V+A G L+ L A A E IK+GLIA FSGPFADYGKQME GIKAY HG Sbjct: 6 RRRVLLTVVA--GTLMTGLPAFADEPIKIGLIAPFSGPFADYGKQMEDGIKAYQRLHGTT 63 Query: 63 VAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKKPM 122 G+++QII+KDTTGP P++AKRLAQELVVR+KVDFLAGFGLTPEALAVAPIA+QAKKPM Sbjct: 64 AGGRQVQIIVKDTTGPVPDVAKRLAQELVVRDKVDFLAGFGLTPEALAVAPIAQQAKKPM 123 Query: 123 IIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAETAF 182 +I NAA+S ITTKS+Y+ R SMTLPQ+S P+A+WALKNGIK+V T+VADY PGIDAE AF Sbjct: 124 VIFNAASSSITTKSDYVTRVSMTLPQISTPIASWALKNGIKQVATVVADYAPGIDAENAF 183 Query: 183 KTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRERG 242 K GGGQV+E++RVPLRNPEFAP+IQR+KDAKP+AVF+F+PAGEQ +AFMKG+RERG Sbjct: 184 KQTFTAGGGQVVEAVRVPLRNPEFAPFIQRVKDAKPQAVFVFLPAGEQGVAFMKGFRERG 243 Query: 243 LAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPGAG 302 LA+AGIKVIATGDLTDDHV+PAMG++TLGVIT+FHYSAAHDSP+NK FLK+FA ANPGAG Sbjct: 244 LAQAGIKVIATGDLTDDHVLPAMGDATLGVITSFHYSAAHDSPQNKTFLKAFAEANPGAG 303 Query: 303 RPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIVQT 362 RPNFMAVAAYDG+ AIY V KL GKIDG++AMA K MK SPRGPI IDPATRD+VQT Sbjct: 304 RPNFMAVAAYDGIGAIYNVINKLGGKIDGEKAMAAFKGMKIDSPRGPITIDPATRDVVQT 363 Query: 363 VYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 VY+RKVEK+G+E YNVEFDKF ++KD GK Sbjct: 364 VYIRKVEKVGNELYNVEFDKFADVKDPGK 392 >ref|YP_003751833.1| substrate-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] emb|CBJ50537.1| putative substrate-binding periplasmic abc transporter protein [Ralstonia solanacearum PSI07] Length = 392 Score = 591 bits (1523), Expect = e-167, Method: Compositional matrix adjust. Identities = 280/391 (71%), Positives = 334/391 (85%), Gaps = 3/391 (0%) Query: 4 KKIALL--AVMAASGGLLASL-AQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG 60 K+ ALL A+ A LLA+L A A E I++GLIA FSGPFA+YGKQMEGGIKAY HG Sbjct: 2 KRRALLQTAIAGALAPLLATLPAHADEPIRIGLIAPFSGPFAEYGKQMEGGIKAYQKLHG 61 Query: 61 DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK 120 G++++I++KDTTGP PEIAKRLAQELVVR+KVDFLAGF LTPEALAV PIA+QAK Sbjct: 62 TTAGGRRVEILMKDTTGPVPEIAKRLAQELVVRDKVDFLAGFCLTPEALAVTPIAQQAKV 121 Query: 121 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET 180 PM++ NAA+S ITTKS+Y+ R SMTLPQVS PMATWALKNGIK+V +VADY PGIDAE Sbjct: 122 PMVVFNAASSSITTKSDYVTRVSMTLPQVSAPMATWALKNGIKQVAIVVADYAPGIDAEH 181 Query: 181 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE 240 AF+ GGGQV+E++RVPLRNPEFAP+IQR+KDAKP+AVF+F+PAGEQ +AFMK +R+ Sbjct: 182 AFRQTFTAGGGQVVEAVRVPLRNPEFAPFIQRVKDAKPQAVFVFLPAGEQGVAFMKSFRD 241 Query: 241 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG 300 RGLA+AGIK+IATGDLTDDHV+PAMG++TLGVIT FHYSAAHDSP+N+ FLK+FA ANPG Sbjct: 242 RGLAQAGIKLIATGDLTDDHVLPAMGDATLGVITAFHYSAAHDSPQNRTFLKAFADANPG 301 Query: 301 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV 360 AGRPNFMAVAAYDG+ AIY+V KL G++DG +AMA+ K MK SPRGP+ IDPATRD+V Sbjct: 302 AGRPNFMAVAAYDGIGAIYDVINKLGGRMDGTKAMALFKGMKIDSPRGPVLIDPATRDVV 361 Query: 361 QTVYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 QTVY+R+VEK+G E YNVEFDKF ++KD GK Sbjct: 362 QTVYIRRVEKVGGELYNVEFDKFADVKDPGK 392 >ref|NP_520365.1| substrate-binding periplasmic ABC transporter protein [Ralstonia solanacearum GMI1000] emb|CAD15951.1| probable substrate-binding periplasmic abc transporter protein [Ralstonia solanacearum GMI1000] Length = 392 Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust. Identities = 277/392 (70%), Positives = 330/392 (84%), Gaps = 1/392 (0%) Query: 1 MRFKKIALLAVMAASGGLLASL-AQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQH 59 M+ + + L AV A L +L A A E I++GLIA FSG FA+YGKQMEGGIKAY H Sbjct: 1 MKRRALLLTAVAGALASCLTTLPAHADEPIRIGLIAPFSGAFAEYGKQMEGGIKAYQKLH 60 Query: 60 GDQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAK 119 G G++++II+KDTTGP PEIAKRLAQELVVR+KVDFLAGF LTPEALAV PIA+QAK Sbjct: 61 GTTAGGRRVEIIMKDTTGPVPEIAKRLAQELVVRDKVDFLAGFCLTPEALAVTPIAQQAK 120 Query: 120 KPMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAE 179 PM++ NAA+S ITTKS+Y+ R SMTLPQVS PMATWALKNGI++V +VADY PGIDAE Sbjct: 121 VPMVVFNAASSSITTKSDYVTRVSMTLPQVSAPMATWALKNGIRQVAIVVADYAPGIDAE 180 Query: 180 TAFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYR 239 AF+ GGGQV+E++RVPLRNPEFAP+IQR+KD KP+AVF+F+PAGEQ +AFMKG+R Sbjct: 181 NAFRQTFTAGGGQVVEAVRVPLRNPEFAPFIQRVKDVKPQAVFVFLPAGEQGVAFMKGFR 240 Query: 240 ERGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANP 299 +RGLA+AGIK+IATGDLTDDHV+PAMG++TLGVIT FHYSAAHDSP+NK FLK+FA ANP Sbjct: 241 DRGLAQAGIKLIATGDLTDDHVLPAMGDATLGVITAFHYSAAHDSPQNKTFLKAFADANP 300 Query: 300 GAGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDI 359 GAGRPNFMAVAAYDG+ AIY+V +L GK+DG +AM + K MK SPRGPI IDPATRD+ Sbjct: 301 GAGRPNFMAVAAYDGLGAIYDVINRLGGKMDGTKAMGLFKGMKIDSPRGPILIDPATRDV 360 Query: 360 VQTVYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 VQTVY+R+VEK+G E YNVEFDKF ++KD GK Sbjct: 361 VQTVYIRRVEKVGGELYNVEFDKFADVKDPGK 392 >emb|CCA84602.1| putative substrate-binding periplasmic abc transporter protein [Ralstonia syzygii R24] Length = 392 Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust. Identities = 278/391 (71%), Positives = 334/391 (85%), Gaps = 3/391 (0%) Query: 4 KKIALL--AVMAASGGLLASL-AQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG 60 K+ ALL AV+ A L +L A+A E I++GLIA FSGPFA+YGKQMEGGIKAY HG Sbjct: 2 KRRALLQTAVVGALASFLTTLPARADEPIRIGLIAPFSGPFAEYGKQMEGGIKAYQKLHG 61 Query: 61 DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK 120 G++++I++KDTTGP PEIAKRLAQELVVR+KVDFLAGF LTPEALAV PIA+QAK Sbjct: 62 TTAGGRRVEILMKDTTGPVPEIAKRLAQELVVRDKVDFLAGFCLTPEALAVTPIAQQAKV 121 Query: 121 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET 180 PM++ NAA+S ITTKS+Y+ R SMTLPQVS PMATWALKNGIK+V +VADY PGIDAE Sbjct: 122 PMVVFNAASSSITTKSDYVTRVSMTLPQVSAPMATWALKNGIKQVAIVVADYAPGIDAEH 181 Query: 181 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE 240 AF+ GGGQV+E++RVPLRNPEFAP+IQR+KDAKP+AVF+F+PAGEQ +AFMK +R+ Sbjct: 182 AFRQTFTAGGGQVVEAVRVPLRNPEFAPFIQRVKDAKPQAVFVFLPAGEQGVAFMKSFRD 241 Query: 241 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG 300 RGLA+AGIK+IATGDLTDDHV+PAMG++TLGVIT FHYSAAHDSP+N+ FLK+FA ANPG Sbjct: 242 RGLAQAGIKLIATGDLTDDHVLPAMGDATLGVITAFHYSAAHDSPQNRTFLKAFADANPG 301 Query: 301 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV 360 AGRPNFMAVAAYDG+ AIY+V KL G++DG +AMA+ K MK SPRGP+ IDPATRD+V Sbjct: 302 AGRPNFMAVAAYDGIGAIYDVINKLGGRMDGTKAMALFKGMKIDSPRGPVLIDPATRDVV 361 Query: 361 QTVYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 QTVY+R+VEK+G E YN+EFDKF ++KD GK Sbjct: 362 QTVYIRRVEKVGGELYNIEFDKFADVKDPGK 392 >emb|CCA79530.1| putative substrate-binding periplasmic abc transporter protein [blood disease bacterium R229] Length = 392 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 279/391 (71%), Positives = 333/391 (85%), Gaps = 3/391 (0%) Query: 4 KKIALL--AVMAASGGLLASL-AQAQETIKVGLIAAFSGPFADYGKQMEGGIKAYMAQHG 60 K+ ALL A+ A LLA+L A A E I++ LIA FSGPFA+YGKQMEGGIKAY HG Sbjct: 2 KRHALLQTAIAGALAPLLATLPAHADEPIRIDLIAPFSGPFAEYGKQMEGGIKAYQKLHG 61 Query: 61 DQVAGKKIQIIIKDTTGPSPEIAKRLAQELVVREKVDFLAGFGLTPEALAVAPIAEQAKK 120 G++++I++KDTTGP PEIAKRLAQELVVR+KVDFLAGF LTPEALAV PIA+QAK Sbjct: 62 TTAGGRRVEILMKDTTGPVPEIAKRLAQELVVRDKVDFLAGFCLTPEALAVTPIAQQAKV 121 Query: 121 PMIIMNAATSVITTKSNYIARFSMTLPQVSGPMATWALKNGIKRVVTLVADYGPGIDAET 180 PM++ NAA+S ITTKS+Y+ R SMTLPQVS PMATWALKNGIK+V +VADY PGIDAE Sbjct: 122 PMVVFNAASSSITTKSDYVTRVSMTLPQVSAPMATWALKNGIKQVAIVVADYAPGIDAEH 181 Query: 181 AFKTNLLGGGGQVLESIRVPLRNPEFAPYIQRIKDAKPEAVFIFVPAGEQSIAFMKGYRE 240 AF+ GGGQV+E++RVPLRNPEFAP+IQR+KDAKP+AVF+F+PAGEQ +AFMK +R+ Sbjct: 182 AFRQTFTAGGGQVVEAVRVPLRNPEFAPFIQRVKDAKPQAVFVFLPAGEQGVAFMKSFRD 241 Query: 241 RGLAEAGIKVIATGDLTDDHVMPAMGESTLGVITTFHYSAAHDSPENKAFLKSFAAANPG 300 RGLA+AGIK+IATGDLTDDHV+PAMG++TLGVIT FHYSAAHDSP+N+ FLK+FA ANPG Sbjct: 242 RGLAQAGIKLIATGDLTDDHVLPAMGDATLGVITAFHYSAAHDSPQNRTFLKAFADANPG 301 Query: 301 AGRPNFMAVAAYDGMNAIYEVSKKLNGKIDGDRAMAILKTMKFTSPRGPIAIDPATRDIV 360 AGRPNFMAVAAYDG+ AIY+V KL G++DG +AMA+ K MK SPRGP+ IDPATRD+V Sbjct: 302 AGRPNFMAVAAYDGIGAIYDVINKLGGRMDGTKAMALFKGMKIDSPRGPVLIDPATRDVV 361 Query: 361 QTVYVRKVEKIGSEAYNVEFDKFENMKDTGK 391 QTVY+R+VEK+G E YNVEFDKF ++KD GK Sbjct: 362 QTVYIRRVEKVGGELYNVEFDKFADVKDPGK 392