BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0042.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777380.1| 3-oxoadipate CoA-transferase subunit B [Herb... 437 e-121 ref|ZP_00943598.1| 3-oxoadipate CoA-transferase subunit B [Ralst... 362 2e-98 ref|YP_004348116.1| 3-oxoadipate CoA-transferase [Burkholderia g... 362 2e-98 ref|ZP_03697429.1| 3-oxoacid CoA-transferase, B subunit [Lutiell... 361 3e-98 emb|CCA84611.1| 3-oxoadipate CoA-transferase subunit B [Ralstoni... 361 4e-98 ref|YP_003751824.1| 3-oxoadipate CoA-transferase subunit B [Rals... 361 4e-98 gb|AEG68477.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia... 361 5e-98 ref|YP_001585249.1| 3-oxoacid CoA-transferase, B subunit [Burkho... 360 8e-98 ref|YP_003745068.1| 3-oxoadipate CoA-transferase subunit B [Rals... 360 9e-98 ref|YP_004680402.1| 3-oxoadipate CoA-transferase subunit B [Cupr... 359 1e-97 >ref|YP_003777380.1| 3-oxoadipate CoA-transferase subunit B [Herbaspirillum seropedicae SmR1] gb|ADJ65472.1| 3-oxoadipate CoA-transferase subunit B protein [Herbaspirillum seropedicae SmR1] Length = 213 Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust. Identities = 213/213 (100%), Positives = 213/213 (100%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP Sbjct: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG Sbjct: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI Sbjct: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPAA 213 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPAA Sbjct: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPAA 213 >ref|ZP_00943598.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia solanacearum UW551] ref|YP_002260249.1| 3-oxoadipate coa-transferase subunit b protein [Ralstonia solanacearum IPO1609] gb|EAP74005.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia solanacearum UW551] emb|CAQ62184.1| 3-oxoadipate coa-transferase subunit b protein [Ralstonia solanacearum IPO1609] Length = 220 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 174/212 (82%), Positives = 190/212 (89%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 ++R+TR++IAARVA+DIPEG+ VNLGIGLPT VAN LPAD+EI LHSENG+LGMGPAPAP Sbjct: 9 IRRWTRDQIAARVARDIPEGSVVNLGIGLPTLVANQLPADREILLHSENGLLGMGPAPAP 68 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED DLINAGKQPVT+ GGAYFHHADSFAMMRGGHLD CVLGAFQVSA GDLANWHTG Sbjct: 69 GEEDPDLINAGKQPVTIRPGGAYFHHADSFAMMRGGHLDYCVLGAFQVSATGDLANWHTG 128 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+HQTK G+SK+V C+YPLTGIGCV+ IYTDLAVI Sbjct: 129 APDAIPAVGGAMDLAIGAKQVFVMMEHQTKQGDSKIVPTCTYPLTGIGCVDTIYTDLAVI 188 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPA 212 DVTP GL VRE+ EGL FD LQ LT PLR A Sbjct: 189 DVTPDGLVVREMAEGLDFDTLQTLTAVPLRRA 220 >ref|YP_004348116.1| 3-oxoadipate CoA-transferase [Burkholderia gladioli BSR3] gb|AEA62604.1| 3-oxoadipate CoA-transferase [Burkholderia gladioli BSR3] Length = 218 Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 177/212 (83%), Positives = 188/212 (88%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 MKR TR+E+A RVAQDIPEGAYVNLGIG+PT VAN+L ADKEIFLHSENGVLGMGPAP Sbjct: 1 MKRLTRDEMAQRVAQDIPEGAYVNLGIGVPTLVANHLGADKEIFLHSENGVLGMGPAPEA 60 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 G ED++LINAGKQ VTLLTGGA+FHHADSFAMMRGGHLD CVLGAFQVSAKGDLANWHTG Sbjct: 61 GHEDDELINAGKQHVTLLTGGAFFHHADSFAMMRGGHLDYCVLGAFQVSAKGDLANWHTG 120 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+H TK GESK+V CSYP+TGIGCV RIYTDLAV+ Sbjct: 121 APDAIPAVGGAMDLAIGAKQVFVMMEHLTKQGESKVVAECSYPVTGIGCVTRIYTDLAVL 180 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPA 212 DVT GL VREI LSFDELQ LTG PL A Sbjct: 181 DVTAEGLAVREIFTDLSFDELQALTGVPLVDA 212 >ref|ZP_03697429.1| 3-oxoacid CoA-transferase, B subunit [Lutiella nitroferrum 2002] ref|YP_004847727.1| 3-oxoacid CoA-transferase subunit B [Pseudogulbenkiania sp. NH8B] gb|EEG09915.1| 3-oxoacid CoA-transferase, B subunit [Lutiella nitroferrum 2002] dbj|BAK77313.1| 3-oxoacid CoA-transferase, B subunit [Pseudogulbenkiania sp. NH8B] Length = 218 Score = 361 bits (927), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 171/213 (80%), Positives = 193/213 (90%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 M + TR+++A RVA+DIPEG+YVNLGIGLPTKVANYLP ++EIFLHSENG+LGMG AP P Sbjct: 1 MNKLTRDQMAERVARDIPEGSYVNLGIGLPTKVANYLPKEREIFLHSENGLLGMGEAPEP 60 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED +LINAGK+PVTLL GG++FHH DSFAMMRGGHLDICVLGAFQVSA GDLANWHTG Sbjct: 61 GEEDPELINAGKEPVTLLEGGSFFHHGDSFAMMRGGHLDICVLGAFQVSASGDLANWHTG 120 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 AP AIPAVGGAMDLA+GAKQVFVMMD TKTGESKLVEACSYPLTG+GCV+RIYTD+AVI Sbjct: 121 APGAIPAVGGAMDLAVGAKQVFVMMDLLTKTGESKLVEACSYPLTGVGCVDRIYTDVAVI 180 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPAA 213 DVTP GL VRE+VEG SFDELQ++ PL+ A+ Sbjct: 181 DVTPDGLVVRELVEGNSFDELQRIVPVPLKMAS 213 >emb|CCA84611.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia syzygii R24] Length = 220 Score = 361 bits (927), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 174/212 (82%), Positives = 190/212 (89%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 ++R+TR++IAARVA+DIPEG+ VNLGIGLPT VAN LPAD+EI LHSENG+LGMGPAPAP Sbjct: 9 IQRWTRDQIAARVARDIPEGSVVNLGIGLPTLVANQLPADREILLHSENGLLGMGPAPAP 68 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED DLINAGKQPVT+ GGAYFHHADSFAMMRGGHLD CVLGAFQVSA GDLANWHTG Sbjct: 69 GEEDPDLINAGKQPVTIKPGGAYFHHADSFAMMRGGHLDYCVLGAFQVSATGDLANWHTG 128 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+HQTK G+SK+V C+YPLTGIGCV+ IYTDLAVI Sbjct: 129 APDAIPAVGGAMDLAIGAKQVFVMMEHQTKQGDSKIVPKCTYPLTGIGCVDTIYTDLAVI 188 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPA 212 DVTP GL VRE+ EGL FD LQ LT PLR A Sbjct: 189 DVTPDGLVVREMAEGLDFDTLQTLTAVPLRRA 220 >ref|YP_003751824.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia solanacearum PSI07] emb|CBJ50528.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia solanacearum PSI07] emb|CCA79540.1| 3-oxoadipate CoA-transferase subunit B [blood disease bacterium R229] Length = 220 Score = 361 bits (926), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 174/212 (82%), Positives = 190/212 (89%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 ++R+TR++IAARVA+DIPEG+ VNLGIGLPT VAN LPAD+EI LHSENG+LGMGPAPAP Sbjct: 9 IQRWTRDQIAARVARDIPEGSVVNLGIGLPTLVANQLPADREILLHSENGLLGMGPAPAP 68 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED DLINAGKQPVT+ GGAYFHHADSFAMMRGGHLD CVLGAFQVSA GDLANWHTG Sbjct: 69 GEEDPDLINAGKQPVTIKPGGAYFHHADSFAMMRGGHLDYCVLGAFQVSATGDLANWHTG 128 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+HQTK G+SK+V C+YPLTGIGCV+ IYTDLAVI Sbjct: 129 APDAIPAVGGAMDLAIGAKQVFVMMEHQTKQGDSKIVPKCTYPLTGIGCVDTIYTDLAVI 188 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPA 212 DVTP GL VRE+ EGL FD LQ LT PLR A Sbjct: 189 DVTPDGLVVREMAEGLDFDTLQTLTAVPLRRA 220 >gb|AEG68477.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia solanacearum Po82] Length = 444 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 174/212 (82%), Positives = 190/212 (89%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 ++R+TR++IAARVA+DIPEG+ VNLGIGLPT VAN LPAD+EI LHSENG+LGMGPAPAP Sbjct: 233 IRRWTRDQIAARVARDIPEGSVVNLGIGLPTLVANQLPADREILLHSENGLLGMGPAPAP 292 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED DLINAGKQPVT+ GGAYFHHADSFAMMRGGHLD CVLGAFQVSA GDLANWHTG Sbjct: 293 GEEDPDLINAGKQPVTIRPGGAYFHHADSFAMMRGGHLDYCVLGAFQVSATGDLANWHTG 352 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+HQTK G+SK+V C+YPLTGIGCV+ IYTDLAVI Sbjct: 353 APDAIPAVGGAMDLAIGAKQVFVMMEHQTKQGDSKIVPTCTYPLTGIGCVDTIYTDLAVI 412 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPA 212 DVTP GL VRE+ EGL FD LQ LT PLR A Sbjct: 413 DVTPDGLIVREMAEGLDFDTLQTLTAVPLRRA 444 >ref|YP_001585249.1| 3-oxoacid CoA-transferase, B subunit [Burkholderia multivorans ATCC 17616] ref|YP_001947644.1| 3-oxoadipate CoA-transferase beta subunit [Burkholderia multivorans ATCC 17616] ref|ZP_03570583.1| 3-oxoadipate CoA-transferase subunit B [Burkholderia multivorans CGD2M] ref|ZP_03577227.1| 3-oxoadipate CoA-transferase subunit B [Burkholderia multivorans CGD2] ref|ZP_03583540.1| 3-oxoadipate CoA-transferase subunit B [Burkholderia multivorans CGD1] gb|ABX18957.1| 3-oxoacid CoA-transferase, B subunit [Burkholderia multivorans ATCC 17616] dbj|BAG45108.1| 3-oxoadipate CoA-transferase beta subunit [Burkholderia multivorans ATCC 17616] gb|EEE01983.1| 3-oxoadipate CoA-transferase subunit B [Burkholderia multivorans CGD1] gb|EEE08804.1| 3-oxoadipate CoA-transferase subunit B [Burkholderia multivorans CGD2] gb|EEE16490.1| 3-oxoadipate CoA-transferase subunit B [Burkholderia multivorans CGD2M] Length = 217 Score = 360 bits (924), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 174/209 (83%), Positives = 187/209 (89%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 MKR TR+E+A RVAQDIPEGAYVNLGIG+PT VAN+L KEIFLHSENG+LGMGPAPAP Sbjct: 1 MKRLTRDEMAKRVAQDIPEGAYVNLGIGVPTLVANHLDPSKEIFLHSENGLLGMGPAPAP 60 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED++LINAGKQ VTLLTGGAYFHHADSFAMMRGGHLD CVLGAFQVSA GDLANWHTG Sbjct: 61 GEEDDELINAGKQHVTLLTGGAYFHHADSFAMMRGGHLDYCVLGAFQVSANGDLANWHTG 120 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+H TK GESK+V CSYP+TG+ CV+RIYTDLAV+ Sbjct: 121 APDAIPAVGGAMDLAIGAKQVFVMMEHLTKQGESKIVAQCSYPVTGVQCVSRIYTDLAVL 180 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPL 209 DVT GL V EI LSFDELQKLTG PL Sbjct: 181 DVTSDGLAVSEIFTDLSFDELQKLTGVPL 209 >ref|YP_003745068.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia solanacearum CFBP2957] emb|CBJ42441.1| 3-oxoadipate CoA-transferase subunit B [Ralstonia solanacearum CFBP2957] Length = 220 Score = 360 bits (923), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 173/212 (81%), Positives = 189/212 (89%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 ++R+TR++IA RVA+DIPEG+ VNLGIGLPT VAN LPAD+EI LHSENG+LGMGPAPAP Sbjct: 9 IRRWTRDQIAERVARDIPEGSVVNLGIGLPTLVANQLPADREILLHSENGLLGMGPAPAP 68 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED DLINAGKQPVT+ GGAYFHHADSFAMMRGGHLD CVLGAFQVSA GDLANWHTG Sbjct: 69 GEEDPDLINAGKQPVTIRPGGAYFHHADSFAMMRGGHLDYCVLGAFQVSATGDLANWHTG 128 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+HQTK G+SK+V C+YPLTGIGCV+ IYTDLAVI Sbjct: 129 APDAIPAVGGAMDLAIGAKQVFVMMEHQTKQGDSKIVPTCTYPLTGIGCVDTIYTDLAVI 188 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPA 212 DVTP GL VRE+ EGL FD LQ LT PLR A Sbjct: 189 DVTPDGLVVREMAEGLDFDTLQTLTAVPLRRA 220 >ref|YP_004680402.1| 3-oxoadipate CoA-transferase subunit B [Cupriavidus necator N-1] gb|AEI79170.1| 3-oxoadipate CoA-transferase subunit B [Cupriavidus necator N-1] Length = 213 Score = 359 bits (922), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 173/213 (81%), Positives = 190/213 (89%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 M+R TR+++AARVA+DIPEGA VNLGIGLPT V N+LPADKEI LHSENG+LGMG APAP Sbjct: 1 MQRLTRDQMAARVAKDIPEGAVVNLGIGLPTLVGNHLPADKEILLHSENGLLGMGSAPAP 60 Query: 61 GEEDEDLINAGKQPVTLLTGGAYFHHADSFAMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 GEED DLINAGKQPVT+ GG+YFHHADSFAMMRGGHLD CVLGAFQVS KGDLANWHTG Sbjct: 61 GEEDGDLINAGKQPVTIKPGGSYFHHADSFAMMRGGHLDFCVLGAFQVSEKGDLANWHTG 120 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 AP AIPAVGGAMDLAIGAKQVFVMM+HQTK GESK+V C+YPLTGIGCV RIYTDLA I Sbjct: 121 APGAIPAVGGAMDLAIGAKQVFVMMEHQTKQGESKIVPQCTYPLTGIGCVTRIYTDLATI 180 Query: 181 DVTPHGLQVREIVEGLSFDELQKLTGAPLRPAA 213 DVT GL R++VEGLSFDELQ++TG PL+ AA Sbjct: 181 DVTADGLVARDLVEGLSFDELQRITGVPLKLAA 213