BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0037.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777375.1| branched-chain amino acid ABC transporter AT... 460 e-128 ref|ZP_00943589.1| LivF [Ralstonia solanacearum UW551] >gi|20774... 351 6e-95 ref|NP_520366.1| ABC transporter ATP-binding protein [Ralstonia ... 349 2e-94 emb|CBJ37335.1| High-affinity branched-chain amino acid transpor... 348 3e-94 gb|AEG68485.1| high-affinity branched-chain amino acid transport... 348 3e-94 ref|YP_003751832.1| high-affinity branched-chain amino acid tran... 348 4e-94 emb|CCA79531.1| High-affinity branched-chain amino acid transpor... 347 9e-94 ref|YP_001900016.1| ABC transporter-like protein [Ralstonia pick... 347 1e-93 ref|YP_002982008.1| ABC transporter-like protein [Ralstonia pick... 343 1e-92 emb|CCA84603.1| high-affinity branched-chain amino acid transpor... 338 3e-91 >ref|YP_003777375.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65467.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 233 Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust. Identities = 232/233 (99%), Positives = 232/233 (99%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS Sbjct: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWRGGDIARV THKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR Sbjct: 61 IRWRGGDIARVATHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE Sbjct: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA Sbjct: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 >ref|ZP_00943589.1| LivF [Ralstonia solanacearum UW551] ref|YP_002260242.1| atp-binding protein [Ralstonia solanacearum IPO1609] gb|EAP73996.1| LivF [Ralstonia solanacearum UW551] emb|CAQ35889.1| atp-binding protein [Ralstonia solanacearum MolK2] emb|CAQ62177.1| atp-binding protein [Ralstonia solanacearum IPO1609] Length = 233 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 173/233 (74%), Positives = 198/233 (84%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELLA DRV+AGYG ++VL+DVSF + G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MAELLAFDRVTAGYGNAVVLDDVSFGLDAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWRG DIARVP H+RA AGLGWVPQER+MFPSL+VEEHLT V R G WD+ ++YQ FPR Sbjct: 61 IRWRGADIARVPPHRRARAGLGWVPQERWMFPSLTVEEHLTAVLRPGAWDVARVYQTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARAL+ +P++LLLDEPMEGLAPIIVQEL + IR LV + Sbjct: 121 LEERRRNLGNQLSGGEQQMVAIARALVTNPALLLLDEPMEGLAPIIVQELGRAIRALVDD 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LTQRA+VLDRGRIVHAS S LLAD L RLVA+A Sbjct: 181 GGMAVILVEQHARLALELTQRALVLDRGRIVHASASADLLADAPLLQRLVAMA 233 >ref|NP_520366.1| ABC transporter ATP-binding protein [Ralstonia solanacearum GMI1000] emb|CAD15952.1| probable atp-binding abc transporter protein [Ralstonia solanacearum GMI1000] Length = 233 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 172/233 (73%), Positives = 199/233 (85%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+L+RV+AGYG ++VL+DVSF + G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MAELLSLERVTAGYGNAVVLDDVSFGLDAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWRG DIARVP H+RA AGLGWVPQER+MFPSL+VEEHLT V R G WD+ ++Y+ FPR Sbjct: 61 IRWRGADIARVPPHRRARAGLGWVPQERWMFPSLTVEEHLTAVARPGAWDVARVYRAFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARAL+ +P++LLLDEPMEGLAPIIVQEL + IR LV E Sbjct: 121 LEERRRNLGNQLSGGEQQMVAIARALVTNPALLLLDEPMEGLAPIIVQELGRAIRALVDE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LT+RA+VLDRGRIVHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALELTRRALVLDRGRIVHASASADLLADAPLLQRLVAVA 233 >emb|CBJ37335.1| High-affinity branched-chain amino acid transport ATP-binding protein [Ralstonia solanacearum CMR15] Length = 233 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 171/233 (73%), Positives = 198/233 (84%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+ +RV+AGYG ++VL+DVSF + G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MAELLSFERVTAGYGNAVVLDDVSFGLDAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWRG DIARVP H+RA AGLGWVPQER+MFPSL+VEEHLT V R G WD+ ++Y+ FPR Sbjct: 61 IRWRGADIARVPPHRRARAGLGWVPQERWMFPSLTVEEHLTAVARPGAWDVARVYRTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARAL+ +P++LLLDEPMEGLAPIIVQEL + IR LV E Sbjct: 121 LEERRRNLGNQLSGGEQQMVAIARALVTNPALLLLDEPMEGLAPIIVQELGRAIRALVDE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LT+RA+VLDRGRIVHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALELTRRALVLDRGRIVHASASADLLADAPLLQRLVAVA 233 >gb|AEG68485.1| high-affinity branched-chain amino acid transport ATP-binding protein [Ralstonia solanacearum Po82] Length = 233 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 171/233 (73%), Positives = 199/233 (85%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+ +RV+AGYG ++VL++VSF + G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MAELLSFERVTAGYGNAVVLDEVSFGLDAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWRG DIARVP H+RA AGLGWVPQER+MFPSL+VEEHLT V R G WD+ ++YQ FPR Sbjct: 61 IRWRGADIARVPPHRRARAGLGWVPQERWMFPSLTVEEHLTAVLRPGAWDVARVYQTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARAL+ +P++LLLDEPMEGLAPIIVQEL + IR LV + Sbjct: 121 LEERRRNLGNQLSGGEQQMVAIARALVTNPALLLLDEPMEGLAPIIVQELGRAIRALVDD 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL+LTQRA+VLDRGRIVHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALALTQRALVLDRGRIVHASASADLLADAPLLQRLVAVA 233 >ref|YP_003751832.1| high-affinity branched-chain amino acid transport ATP-binding protein [Ralstonia solanacearum PSI07] emb|CBJ50536.1| High-affinity branched-chain amino acid transport ATP-binding protein [Ralstonia solanacearum PSI07] Length = 233 Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 171/233 (73%), Positives = 200/233 (85%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+ + V+AG+G ++VL+DVSF++ G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MAELLSFENVTAGHGNAVVLDDVSFSLDAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWRG DIARVP H+RA AGLGWVPQER+MFPSL+VEEHLTVV+R G WD+ ++Y+ FPR Sbjct: 61 IRWRGADIARVPPHRRARAGLGWVPQERWMFPSLTVEEHLTVVQRPGAWDVARVYKTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARAL+ +P++LLLDEPMEGLAPIIVQEL + IR LV E Sbjct: 121 LGERRRNLGNQLSGGEQQMVAIARALVTNPALLLLDEPMEGLAPIIVQELGRAIRALVDE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LTQRA+VLDRGRIVHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALELTQRALVLDRGRIVHASASADLLADAPLLQRLVAVA 233 >emb|CCA79531.1| High-affinity branched-chain amino acid transport ATP-binding protein [blood disease bacterium R229] Length = 233 Score = 347 bits (889), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 171/233 (73%), Positives = 200/233 (85%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+ + V+AG+G ++VL+DVSF++ G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MAELLSFENVTAGHGNAVVLDDVSFSLDAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWRG DIARVP H+RA AGLGWVPQER+MFPSL+VEEHLTVV+R G WD+ ++Y+ FPR Sbjct: 61 IRWRGVDIARVPPHRRARAGLGWVPQERWMFPSLTVEEHLTVVQRPGAWDVARVYKTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARAL+ +P++LLLDEPMEGLAPIIVQEL + IR LV E Sbjct: 121 LGERRRNLGNQLSGGEQQMVAIARALVTNPALLLLDEPMEGLAPIIVQELGRAIRALVDE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LTQRA+VLDRGRIVHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALELTQRALVLDRGRIVHASASADLLADAPLLQRLVAVA 233 >ref|YP_001900016.1| ABC transporter-like protein [Ralstonia pickettii 12J] ref|ZP_07676428.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] gb|ACD27584.1| ABC transporter related [Ralstonia pickettii 12J] gb|EFP65000.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] Length = 233 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 169/233 (72%), Positives = 198/233 (84%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+L+ V+AGYG ++VL+DVSF ++ G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MRELLSLENVTAGYGNAVVLDDVSFALEAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRW G DIA++P H+RA AGLGWVPQER+MFPSL+VEEHLT V R G WD+ ++Y+ FPR Sbjct: 61 IRWLGADIAKMPPHRRARAGLGWVPQERWMFPSLTVEEHLTAVARPGAWDVARVYKTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARALM +P++LLLDEPMEGLAPIIVQEL + IR LV E Sbjct: 121 LQERRRNLGNQLSGGEQQMVAIARALMTNPALLLLDEPMEGLAPIIVQELGRAIRALVEE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LTQRA+VLDRGR+VHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALQLTQRALVLDRGRVVHASASADLLADAPLLQRLVAVA 233 >ref|YP_002982008.1| ABC transporter-like protein [Ralstonia pickettii 12D] gb|ACS63336.1| ABC transporter related [Ralstonia pickettii 12D] Length = 233 Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 168/233 (72%), Positives = 197/233 (84%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+L+ V+AGYG ++VL+DVSF ++ G SLALLGRNGVGKT+LL TLMG TRLH G Sbjct: 1 MRELLSLENVTAGYGNAVVLDDVSFALEAGGSLALLGRNGVGKTTLLATLMGFTRLHCGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRW G DIA+VP H+RA AGLGWVPQER+MFPSL+VEEHL+ V R G WD+ ++Y+ FPR Sbjct: 61 IRWLGVDIAKVPPHRRARAGLGWVPQERWMFPSLTVEEHLSAVARPGAWDVARVYKTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARALM +P++LLLDEPMEGLAPIIVQEL + IR LV E Sbjct: 121 LQERRRNLGNQLSGGEQQMVAIARALMTNPALLLLDEPMEGLAPIIVQELGRAIRALVEE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LTQRA+VLDRGR+VHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALQLTQRALVLDRGRVVHASASADLLADAPLLQRLVAVA 233 >emb|CCA84603.1| high-affinity branched-chain amino acid transport ATP-binding protein [Ralstonia syzygii R24] Length = 233 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 168/233 (72%), Positives = 197/233 (84%) Query: 1 MPELLALDRVSAGYGQSIVLEDVSFTMQEGESLALLGRNGVGKTSLLITLMGLTRLHGGS 60 M ELL+ + V+AG+G ++VL+DVSF++ G SLALLGRNGVGKT+LL TLMG TRLHGG Sbjct: 1 MAELLSFESVTAGHGNAVVLDDVSFSLDAGGSLALLGRNGVGKTTLLATLMGFTRLHGGR 60 Query: 61 IRWRGGDIARVPTHKRAHAGLGWVPQERFMFPSLSVEEHLTVVERGGKWDLQKIYQIFPR 120 IRWR DIA VP H+RA AGLGWVPQER+MFPSL+VEEHLTVV+R G WD+ ++Y+ FPR Sbjct: 61 IRWRSVDIAGVPPHRRARAGLGWVPQERWMFPSLTVEEHLTVVQRPGAWDVARVYKTFPR 120 Query: 121 LHERRHNMGNQLSGGEQQMLAIARALMVSPSILLLDEPMEGLAPIIVQELLKVIRRLVSE 180 L ERR N+GNQLSGGEQQM+AIARAL+ +P++LLLDEPMEGLAPIIVQEL + IR LV E Sbjct: 121 LGERRRNLGNQLSGGEQQMVAIARALVTNPALLLLDEPMEGLAPIIVQELGRAIRALVDE 180 Query: 181 EGMSVIVVEQHARMALSLTQRAIVLDRGRIVHASDSQSLLADGDKLDRLVAVA 233 GM+VI+VEQHAR+AL LTQRA+VLDRG IVHAS S LLAD L RLVAVA Sbjct: 181 GGMAVILVEQHARLALELTQRALVLDRGCIVHASASADLLADAPLLQRLVAVA 233