BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0032.p (394 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777369.1| branched-chain amino acid ABC transporter pe... 792 0.0 ref|YP_550192.1| extracellular ligand-binding receptor [Polaromo... 477 e-132 ref|YP_521574.1| extracellular ligand-binding receptor [Rhodofer... 470 e-130 ref|YP_994969.1| extracellular ligand-binding receptor [Verminep... 470 e-130 ref|YP_982953.1| extracellular ligand-binding receptor [Polaromo... 463 e-128 ref|ZP_08874149.1| extracellular ligand-binding receptor [Vermin... 459 e-127 ref|YP_003609453.1| extracellular ligand-binding receptor [Burkh... 454 e-126 ref|ZP_08406555.1| extracellular ligand-binding receptor [Hylemo... 454 e-125 ref|YP_002943663.1| extracellular ligand-binding receptor [Vario... 453 e-125 ref|ZP_03264314.1| Extracellular ligand-binding receptor [Burkho... 449 e-124 >ref|YP_003777369.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65461.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 395 Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/394 (98%), Positives = 391/394 (99%) Query: 1 MSEMINTRRRQVMLAGTALVAGGAPMLARAADVLKVGLIVPMSGPFASTGRQIEAAVKLY 60 MSEMINTRRRQVMLAGTALVAGGAPMLARAADVLKVGLIVPMSGPFASTGRQIEAAVKLY Sbjct: 2 MSEMINTRRRQVMLAGTALVAGGAPMLARAADVLKVGLIVPMSGPFASTGRQIEAAVKLY 61 Query: 61 QQKYGDSVAGRKVEIVLKDDGGVSPDVTKRLAQELVSREKAQVLMGFGLTPLALAAAPIA 120 QQKYGDSVAGRKVEIVLKDDGGVSPDVTKRLAQELVSREKAQVLMGFGLTPLALAAAPIA Sbjct: 62 QQKYGDSVAGRKVEIVLKDDGGVSPDVTKRLAQELVSREKAQVLMGFGLTPLALAAAPIA 121 Query: 121 TQAKVPMIVTAAATSIIPQRSPYIVRTGFTLAQVTAPLASWAAKNGIKSVVTFVSDYGPG 180 TQAK PMIVTAAATSIIPQRSPYIVRTGFTLAQVTAPLASWAAKNGIKSVVTFVSDYGPG Sbjct: 122 TQAKAPMIVTAAATSIIPQRSPYIVRTGFTLAQVTAPLASWAAKNGIKSVVTFVSDYGPG 181 Query: 181 LDAEKVFVKTFGEAGGKVMESVRVPLRNPDYAPFLQRVKDAKPQALFVFVPSGEGAAVLK 240 LDAEKVFVKTFGEAGGKVMESVRVPLRNPDYAPFLQRVKDAKPQALFVFVPSGEGAAVLK Sbjct: 182 LDAEKVFVKTFGEAGGKVMESVRVPLRNPDYAPFLQRVKDAKPQALFVFVPSGEGAAVLK 241 Query: 241 QFTERGLAAAGIRLICTGDVLDDDLMAGIGAAAKDVVSSHHYSAVHPSAANKEYVEAMAK 300 QFTERGLAAAGIRLICTGDVLDDDLMAGIGAAAKDVVSSHHYSA HPSAANKEYVEAMAK Sbjct: 242 QFTERGLAAAGIRLICTGDVLDDDLMAGIGAAAKDVVSSHHYSAAHPSAANKEYVEAMAK 301 Query: 301 ANKGMRANFHSVGAYDGMHLLYESLKKTGGDADGDKLLAAMKGMSWESVRGPVTIDAATR 360 ANKGMRANFHSVGAYDGMHLLYESLKKTGGDADGDKLLAAMKGMSWESVRGPV +DAATR Sbjct: 302 ANKGMRANFHSVGAYDGMHLLYESLKKTGGDADGDKLLAAMKGMSWESVRGPVAVDAATR 361 Query: 361 DIVQTVYMRKAELRGAEFYNVEFDQVEKVRDPGV 394 DIVQTVYMRKAELRGAEFYNVEFDQVEKVRDPGV Sbjct: 362 DIVQTVYMRKAELRGAEFYNVEFDQVEKVRDPGV 395 >ref|YP_550192.1| extracellular ligand-binding receptor [Polaromonas sp. JS666] gb|ABE45294.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Polaromonas sp. JS666] Length = 390 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 226/360 (62%), Positives = 283/360 (78%), Gaps = 1/360 (0%) Query: 34 LKVGLIVPMSGPFASTGRQIEAAVKLYQQKYGDSVAGRKVEIVLKDDGGVSPDVTKRLAQ 93 ++GL++PM+GPFASTGRQIEAA KLY + GD+VAG+KVE+++KDD G +PDVTKRLAQ Sbjct: 29 FRIGLLLPMTGPFASTGRQIEAAAKLYMAQNGDTVAGKKVELIIKDDTG-TPDVTKRLAQ 87 Query: 94 ELVSREKAQVLMGFGLTPLALAAAPIATQAKVPMIVTAAATSIIPQRSPYIVRTGFTLAQ 153 E++ +K VL GFGLTPLALA AP+ATQ+K PM+V AAATS I Q SPYIVRT FTL Q Sbjct: 88 EMIVNDKVNVLAGFGLTPLALATAPLATQSKTPMVVMAAATSSITQASPYIVRTSFTLPQ 147 Query: 154 VTAPLASWAAKNGIKSVVTFVSDYGPGLDAEKVFVKTFGEAGGKVMESVRVPLRNPDYAP 213 VT +A WA +NGIK VV+ VSDYGPG+DAE+ F F GG V+++VRVPLRNPD+AP Sbjct: 148 VTIGVADWAPRNGIKKVVSLVSDYGPGIDAERTFKDRFTFNGGTVVDAVRVPLRNPDFAP 207 Query: 214 FLQRVKDAKPQALFVFVPSGEGAAVLKQFTERGLAAAGIRLICTGDVLDDDLMAGIGAAA 273 FLQ+V+DAKP A+F FVPSG G+A++KQF ERGL AGI+LI TGDV DDD++ +G A Sbjct: 208 FLQKVRDAKPDAVFAFVPSGAGSALMKQFAERGLDKAGIKLIATGDVTDDDILNDMGEVA 267 Query: 274 KDVVSSHHYSAVHPSAANKEYVEAMAKANKGMRANFHSVGAYDGMHLLYESLKKTGGDAD 333 VV+SHHYSA H S N+++VEA KANKG+R NF +VG YDGM ++YE+LK T G Sbjct: 268 VGVVTSHHYSAAHKSPLNQKFVEAFGKANKGLRPNFMAVGGYDGMRVIYEALKTTKGAGG 327 Query: 334 GDKLLAAMKGMSWESVRGPVTIDAATRDIVQTVYMRKAELRGAEFYNVEFDQVEKVRDPG 393 G+ LLAAMKG +ES RGP+ +DA +RDIVQ VY+RK E G + YNVEF+ ++ V+DPG Sbjct: 328 GEALLAAMKGQVFESPRGPIFVDAQSRDIVQNVYIRKVEKVGGQLYNVEFETIKDVKDPG 387 >ref|YP_521574.1| extracellular ligand-binding receptor [Rhodoferax ferrireducens T118] gb|ABD68043.1| Extracellular ligand-binding receptor [Rhodoferax ferrireducens T118] Length = 390 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 228/362 (62%), Positives = 277/362 (76%), Gaps = 1/362 (0%) Query: 32 DVLKVGLIVPMSGPFASTGRQIEAAVKLYQQKYGDSVAGRKVEIVLKDDGGVSPDVTKRL 91 + K+GLI+PM+G ASTGRQIEAA KLY + GD+VAG+KV +++KDD + PDVTKRL Sbjct: 27 NTFKIGLILPMTGQQASTGRQIEAAAKLYMAQNGDTVAGKKVGLIVKDDTSI-PDVTKRL 85 Query: 92 AQELVSREKAQVLMGFGLTPLALAAAPIATQAKVPMIVTAAATSIIPQRSPYIVRTGFTL 151 AQ+LV +K VL GFG+TP ALA APIATQ+K P++V AAATS I Q SPY+VRT FTL Sbjct: 86 AQDLVVNDKVNVLAGFGITPSALATAPIATQSKTPLVVMAAATSSITQASPYVVRTSFTL 145 Query: 152 AQVTAPLASWAAKNGIKSVVTFVSDYGPGLDAEKVFVKTFGEAGGKVMESVRVPLRNPDY 211 AQ + WA KNGIK VVT VSDYGPG+DAEK F + F GG+V ES+RVPLRNPD+ Sbjct: 146 AQAAVAMGDWAPKNGIKKVVTLVSDYGPGIDAEKYFKERFLFNGGQVPESLRVPLRNPDF 205 Query: 212 APFLQRVKDAKPQALFVFVPSGEGAAVLKQFTERGLAAAGIRLICTGDVLDDDLMAGIGA 271 APFLQ+V+D KP ALFVFVPSG GAAV+KQF ERG+ AGI+LI TGDV DDD + G+G Sbjct: 206 APFLQKVRDLKPDALFVFVPSGAGAAVMKQFLERGMDKAGIKLIGTGDVTDDDQLNGMGD 265 Query: 272 AAKDVVSSHHYSAVHPSAANKEYVEAMAKANKGMRANFHSVGAYDGMHLLYESLKKTGGD 331 A VV+SHHYS HPSA NK++VEA KAN G+R NF +VG YDGM ++YE+LK T G Sbjct: 266 GALGVVTSHHYSTAHPSAVNKKFVEAFGKANPGLRPNFMAVGGYDGMRVIYEALKATKGQ 325 Query: 332 ADGDKLLAAMKGMSWESVRGPVTIDAATRDIVQTVYMRKAELRGAEFYNVEFDQVEKVRD 391 GD LLAAMKG +ES RGP+ IDA TRD+V +Y+RK E + + YNVEFD ++ V+D Sbjct: 326 GGGDALLAAMKGQIFESPRGPMFIDAQTRDVVHNIYLRKVEKKDGQLYNVEFDVIKDVKD 385 Query: 392 PG 393 PG Sbjct: 386 PG 387 >ref|YP_994969.1| extracellular ligand-binding receptor [Verminephrobacter eiseniae EF01-2] gb|ABM55951.1| Extracellular ligand-binding receptor [Verminephrobacter eiseniae EF01-2] Length = 395 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 226/360 (62%), Positives = 280/360 (77%), Gaps = 1/360 (0%) Query: 34 LKVGLIVPMSGPFASTGRQIEAAVKLYQQKYGDSVAGRKVEIVLKDDGGVSPDVTKRLAQ 93 K+GLI+PM+G A+TGRQIEAA KLY + GD+VAGRKV+++++DD + PD+T+RLAQ Sbjct: 34 FKIGLILPMTGQQATTGRQIEAAAKLYMAQNGDTVAGRKVQLLVRDDTSL-PDMTRRLAQ 92 Query: 94 ELVSREKAQVLMGFGLTPLALAAAPIATQAKVPMIVTAAATSIIPQRSPYIVRTGFTLAQ 153 ELV +K VL G G+TP ALA AP+ATQ+K P++V +AATS I + SPY+VRT FTL Q Sbjct: 93 ELVVNDKVNVLAGMGITPSALATAPLATQSKTPLVVMSAATSSITEASPYVVRTSFTLPQ 152 Query: 154 VTAPLASWAAKNGIKSVVTFVSDYGPGLDAEKVFVKTFGEAGGKVMESVRVPLRNPDYAP 213 V+ PLA WA+ NGIK VVT VSDYGPG+DAEK F + GG+V E++RVPLR+PD+AP Sbjct: 153 VSVPLADWASGNGIKKVVTLVSDYGPGIDAEKYFSQRLSANGGQVTEALRVPLRSPDFAP 212 Query: 214 FLQRVKDAKPQALFVFVPSGEGAAVLKQFTERGLAAAGIRLICTGDVLDDDLMAGIGAAA 273 FLQ+V+DAKP ALFVFVPSG AAV+KQF ERGL AGIRLI TGDV +DD + +G A Sbjct: 213 FLQKVRDAKPDALFVFVPSGASAAVMKQFLERGLGKAGIRLIATGDVTEDDQLNAMGDGA 272 Query: 274 KDVVSSHHYSAVHPSAANKEYVEAMAKANKGMRANFHSVGAYDGMHLLYESLKKTGGDAD 333 VV+SHHYSA HPS NK++V+A +ANKG+R NF +VG YDGM ++YE+LK T G D Sbjct: 273 LGVVTSHHYSAAHPSPLNKQFVQAFEQANKGLRPNFMAVGGYDGMRVIYEALKTTRGVGD 332 Query: 334 GDKLLAAMKGMSWESVRGPVTIDAATRDIVQTVYMRKAELRGAEFYNVEFDQVEKVRDPG 393 GD LLAAMKG +ES RGPV+IDA TRDIVQ VY+RK E + YNVEFD +E V+DPG Sbjct: 333 GDALLAAMKGQVFESPRGPVSIDAQTRDIVQNVYLRKVERVDGQLYNVEFDVIEGVKDPG 392 >ref|YP_982953.1| extracellular ligand-binding receptor [Polaromonas naphthalenivorans CJ2] gb|ABM38032.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 390 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 225/362 (62%), Positives = 278/362 (76%), Gaps = 1/362 (0%) Query: 32 DVLKVGLIVPMSGPFASTGRQIEAAVKLYQQKYGDSVAGRKVEIVLKDDGGVSPDVTKRL 91 + K+GLI+PM+G A+TGRQIEAA +LY + GD+VAG+K+++++KDD + PD T+RL Sbjct: 27 NTFKIGLILPMTGQQATTGRQIEAAARLYMAQNGDTVAGKKIQLIVKDDTSL-PDATRRL 85 Query: 92 AQELVSREKAQVLMGFGLTPLALAAAPIATQAKVPMIVTAAATSIIPQRSPYIVRTGFTL 151 AQELV +K VL GFG+TP ALA APIATQ+K PM+V AAATS I Q SPYIVRT FTL Sbjct: 86 AQELVVNDKVNVLAGFGITPSALATAPIATQSKTPMVVMAAATSSITQASPYIVRTSFTL 145 Query: 152 AQVTAPLASWAAKNGIKSVVTFVSDYGPGLDAEKVFVKTFGEAGGKVMESVRVPLRNPDY 211 Q + LA WA KNGIK VVT VSDYGPG+DAEK F + GG+V E++RVPLR PD+ Sbjct: 146 PQASVALADWAPKNGIKKVVTLVSDYGPGIDAEKYFKERLIFNGGQVTEALRVPLRGPDF 205 Query: 212 APFLQRVKDAKPQALFVFVPSGEGAAVLKQFTERGLAAAGIRLICTGDVLDDDLMAGIGA 271 APFLQ+V+DAKP ALFVFVPSG GAAV+KQF ERGL AGI+LI TGDV DDD + +G Sbjct: 206 APFLQKVRDAKPDALFVFVPSGAGAAVMKQFAERGLDKAGIKLIGTGDVTDDDQLNDMGD 265 Query: 272 AAKDVVSSHHYSAVHPSAANKEYVEAMAKANKGMRANFHSVGAYDGMHLLYESLKKTGGD 331 A VV+SHHYSA HPSA NK++VEA +KANKG+R NF +VG YDGM ++YE+LK + G Sbjct: 266 VAVGVVTSHHYSAAHPSAMNKKFVEAFSKANKGLRPNFMAVGGYDGMRVIYEALKTSKGQ 325 Query: 332 ADGDKLLAAMKGMSWESVRGPVTIDAATRDIVQTVYMRKAELRGAEFYNVEFDQVEKVRD 391 GD LLA MKG +ES RG + IDA TRD+VQ +Y+RK E + + YNVEFD ++ V+D Sbjct: 326 GGGDALLAGMKGQIFESPRGKMFIDAQTRDVVQDIYLRKVEKKDGQLYNVEFDVIKDVKD 385 Query: 392 PG 393 PG Sbjct: 386 PG 387 >ref|ZP_08874149.1| extracellular ligand-binding receptor [Verminephrobacter sp. At4] Length = 394 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/362 (61%), Positives = 275/362 (75%), Gaps = 1/362 (0%) Query: 32 DVLKVGLIVPMSGPFASTGRQIEAAVKLYQQKYGDSVAGRKVEIVLKDDGGVSPDVTKRL 91 D K+GLI+PM+G ASTGRQIEAA +L+ + GD+VAGRKV ++++DD + PDVT+RL Sbjct: 31 DAFKIGLILPMTGQQASTGRQIEAAARLWMAQNGDTVAGRKVRLIVRDDTSL-PDVTRRL 89 Query: 92 AQELVSREKAQVLMGFGLTPLALAAAPIATQAKVPMIVTAAATSIIPQRSPYIVRTGFTL 151 AQELV EK VL G G+TP A+A AP+ATQ+K P++V AAATS I + SPY+VR+ FTL Sbjct: 90 AQELVVNEKVDVLAGMGITPSAMATAPLATQSKTPLVVMAAATSGITEASPYVVRSSFTL 149 Query: 152 AQVTAPLASWAAKNGIKSVVTFVSDYGPGLDAEKVFVKTFGEAGGKVMESVRVPLRNPDY 211 QV+ LA WA +NGI+ VVT VSDY PG+DAEK F + GG+V E++RVPLR PD+ Sbjct: 150 PQVSVALADWAPRNGIRKVVTLVSDYAPGIDAEKFFSQRLLSHGGQVTEALRVPLRGPDF 209 Query: 212 APFLQRVKDAKPQALFVFVPSGEGAAVLKQFTERGLAAAGIRLICTGDVLDDDLMAGIGA 271 APFLQ+V+DA+P ALFVFVPSG GAAV+KQF ERGL AGIRLI TGDV DDD + G+G Sbjct: 210 APFLQKVRDARPDALFVFVPSGAGAAVMKQFLERGLDKAGIRLIATGDVTDDDQLNGMGD 269 Query: 272 AAKDVVSSHHYSAVHPSAANKEYVEAMAKANKGMRANFHSVGAYDGMHLLYESLKKTGGD 331 A V+SSHHYSA HPS NK++V A KAN G+R NF +VG YDGM ++YE+LK T G Sbjct: 270 GALGVISSHHYSAAHPSPLNKKFVLAFEKANPGLRPNFMAVGGYDGMRMIYEALKSTRGA 329 Query: 332 ADGDKLLAAMKGMSWESVRGPVTIDAATRDIVQTVYMRKAELRGAEFYNVEFDQVEKVRD 391 GD LLAA+KG +ES RGPV IDA TRDIVQ VY+R+ E + YNVEFD +E V+D Sbjct: 330 GGGDALLAALKGQVFESPRGPVHIDAQTRDIVQNVYLRRVERVNGQLYNVEFDTIEGVKD 389 Query: 392 PG 393 PG Sbjct: 390 PG 391 >ref|YP_003609453.1| extracellular ligand-binding receptor [Burkholderia sp. CCGE1002] gb|ADG19942.1| Extracellular ligand-binding receptor [Burkholderia sp. CCGE1002] Length = 391 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 231/388 (59%), Positives = 293/388 (75%), Gaps = 1/388 (0%) Query: 5 INTRRRQVMLAGTALVAGGAPMLARAADVLKVGLIVPMSGPFASTGRQIEAAVKLYQQKY 64 + ++R ++ A ALV G+ ++A A DV+KVGLIVPMSGPFASTGRQ++AAVKLY ++ Sbjct: 1 MQNKKRTLLKATAALVLAGSSVVAHADDVVKVGLIVPMSGPFASTGRQVDAAVKLYMAQH 60 Query: 65 GDSVAGRKVEIVLKDDGGVSPDVTKRLAQELVSREKAQVLMGFGLTPLALAAAPIATQAK 124 GD+VAG+K++++LKDD V PD TKRLAQEL+ ++ VL GFGLTPLALAAAP+ATQAK Sbjct: 61 GDTVAGKKIQVILKDDTNV-PDTTKRLAQELIVKDHVSVLAGFGLTPLALAAAPLATQAK 119 Query: 125 VPMIVTAAATSIIPQRSPYIVRTGFTLAQVTAPLASWAAKNGIKSVVTFVSDYGPGLDAE 184 VPMIV AAT++I ++SPYIVRTGFTL Q T +A WA NGIK VVT V+DYGPG+DA+ Sbjct: 120 VPMIVMNAATAMITEQSPYIVRTGFTLPQNTLGIARWAPGNGIKKVVTLVADYGPGIDAQ 179 Query: 185 KVFVKTFGEAGGKVMESVRVPLRNPDYAPFLQRVKDAKPQALFVFVPSGEGAAVLKQFTE 244 F K F GG V+E +RVP+ NPD++PFLQ+V D KP ALF+FVPSG GA +KQF E Sbjct: 180 NSFKKVFEAEGGNVVEQLRVPVANPDFSPFLQKVADLKPDALFIFVPSGAGAVFMKQFAE 239 Query: 245 RGLAAAGIRLICTGDVLDDDLMAGIGAAAKDVVSSHHYSAVHPSAANKEYVEAMAKANKG 304 RGL+ GI+LI TGDV+DDD++ +G A V+S HYSA + N+ YV A KAN Sbjct: 240 RGLSKQGIKLIGTGDVVDDDILNAMGDVALGTVTSMHYSAALDNPENRAYVAAFEKANPS 299 Query: 305 MRANFHSVGAYDGMHLLYESLKKTGGDADGDKLLAAMKGMSWESVRGPVTIDAATRDIVQ 364 MR NFHSVGAYDGMHL+Y +L+ T GD +GDKLLAAMKG W S RGPV +D TR++VQ Sbjct: 300 MRPNFHSVGAYDGMHLIYAALQATKGDTNGDKLLAAMKGQKWNSPRGPVELDPQTREMVQ 359 Query: 365 TVYMRKAELRGAEFYNVEFDQVEKVRDP 392 VY+ + E + +NV FD+V+ V+DP Sbjct: 360 NVYITRTERVNGQLFNVSFDKVDAVKDP 387 >ref|ZP_08406555.1| extracellular ligand-binding receptor [Hylemonella gracilis ATCC 19624] gb|EGI76298.1| extracellular ligand-binding receptor [Hylemonella gracilis ATCC 19624] Length = 388 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 223/364 (61%), Positives = 275/364 (75%), Gaps = 3/364 (0%) Query: 30 AADVLKVGLIVPMSGPFASTGRQIEAAVKLYQQKYGDSVAGRKVEIVLKDDGGVSPDVTK 89 A DV KVGLIVPM+G A+TG+QIEAAVKLY + GD+VAG+K+++++KDD + PDVTK Sbjct: 25 AQDVFKVGLIVPMTGQQATTGKQIEAAVKLYIAQNGDTVAGKKIQLIVKDDTSI-PDVTK 83 Query: 90 RLAQELVSREKAQVLMGFGLTPLALAAAPIATQAKVPMIVTAAATSIIPQRSPYIVRTGF 149 RLAQELV ++K VL G G+TP A A APIATQ+K P++V AAATS I SP+IVRT Sbjct: 84 RLAQELVVQDKVDVLAGMGITPSAFATAPIATQSKTPLVVMAAATSSITLSSPFIVRTSM 143 Query: 150 TLAQVTAPLASWAAKNGIKSVVTFVSDYGPGLDAEKVFVKTFGEAGGKVMESVRVPLRNP 209 TL Q ++PLA WAAKNG+K VVT VSDYGPG+DAEK F AGG V+ES+R P+RNP Sbjct: 144 TLPQTSSPLADWAAKNGMKKVVTLVSDYGPGIDAEKFFTARLTAAGGTVVESMRAPMRNP 203 Query: 210 DYAPFLQRVKDAKPQALFVFVPSGEGAAVLKQFTERGLAAAGIRLICTGDVLDDDLMAGI 269 D+APFLQ+V+D KP ALFVFVPSG GAAV+KQF ERG+ AGI+LI TGD+ DDD + G+ Sbjct: 204 DFAPFLQKVRDLKPDALFVFVPSGAGAAVMKQFQERGMDKAGIKLIGTGDLTDDDQLNGM 263 Query: 270 GAAAKDVVSSHHYSAVHPSAANKEYVEAMAKANKGMRANFHSVGAYDGMHLLYESLKKTG 329 G A VV+S YSA HPSA NK +V A KA+ G R NF +VG YDGMH++YE LK T Sbjct: 264 GDVALGVVTSMQYSAYHPSAKNKSFVAAFKKAS-GFRPNFFAVGGYDGMHVIYEGLKATK 322 Query: 330 GDADGDKLLAAMKGMSWESVRGPVTIDAATRDIVQTVYMRKAELRGAEFYNVEFDQVEKV 389 G G+ L+ AMK + WES RGPV++D TRDIVQ +Y+ K E + E YNVEFD ++ V Sbjct: 323 GQG-GEALVNAMKNLKWESPRGPVSLDPETRDIVQNIYLSKVERKDGELYNVEFDVIKDV 381 Query: 390 RDPG 393 +DPG Sbjct: 382 KDPG 385 >ref|YP_002943663.1| extracellular ligand-binding receptor [Variovorax paradoxus S110] gb|ACS18397.1| Extracellular ligand-binding receptor [Variovorax paradoxus S110] Length = 391 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 236/387 (60%), Positives = 292/387 (75%), Gaps = 2/387 (0%) Query: 8 RRRQVMLAG-TALVAGGAPMLARAADVLKVGLIVPMSGPFASTGRQIEAAVKLYQQKYGD 66 RR + AG TAL + A+ ++ K+GLI+PM+G ASTGRQIEAA +LY + GD Sbjct: 3 RRHLIQTAGLTALALSMSLATAQDSNKFKIGLILPMTGQQASTGRQIEAAARLYMAQNGD 62 Query: 67 SVAGRKVEIVLKDDGGVSPDVTKRLAQELVSREKAQVLMGFGLTPLALAAAPIATQAKVP 126 +VAG+K+E+++KDD +PDVTKRLAQEL+ +K V+ GFG+TP ALAAAP+ATQ+K P Sbjct: 63 TVAGKKIELIVKDDVA-TPDVTKRLAQELIVNDKVNVIAGFGVTPAALAAAPLATQSKTP 121 Query: 127 MIVTAAATSIIPQRSPYIVRTGFTLAQVTAPLASWAAKNGIKSVVTFVSDYGPGLDAEKV 186 +V AAATS I + SPYIVR+ FTL QV+ + WA KNG+K+VVT V+DYGPG DAEK Sbjct: 122 QVVMAAATSSITEASPYIVRSSFTLPQVSVAMGDWAPKNGVKTVVTLVADYGPGNDAEKF 181 Query: 187 FVKTFGEAGGKVMESVRVPLRNPDYAPFLQRVKDAKPQALFVFVPSGEGAAVLKQFTERG 246 F + F GGKV+E +RVPLRNPD+APFLQ+V+DAKP ALFVFVPSG GAAV+KQF ERG Sbjct: 182 FTERFQLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQFLERG 241 Query: 247 LAAAGIRLICTGDVLDDDLMAGIGAAAKDVVSSHHYSAVHPSAANKEYVEAMAKANKGMR 306 + AGIR+I TGDV DDD + +G A VV+SHHYSA HPS ANK++VEA KAN MR Sbjct: 242 MDKAGIRMIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPSPANKKFVEAFQKANPKMR 301 Query: 307 ANFHSVGAYDGMHLLYESLKKTGGDADGDKLLAAMKGMSWESVRGPVTIDAATRDIVQTV 366 NF +VG YDGM ++YE+LK T G GD LLAAMKG +ES RGPV IDA TRDIVQ V Sbjct: 302 PNFMAVGGYDGMRVIYEALKATKGQGGGDALLAAMKGQIFESPRGPVYIDAQTRDIVQDV 361 Query: 367 YMRKAELRGAEFYNVEFDQVEKVRDPG 393 Y+RK E + + YNVEFD ++ V+DPG Sbjct: 362 YLRKVEKKDGQLYNVEFDVIKGVKDPG 388 >ref|ZP_03264314.1| Extracellular ligand-binding receptor [Burkholderia sp. H160] gb|EEA04158.1| Extracellular ligand-binding receptor [Burkholderia sp. H160] Length = 391 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 230/388 (59%), Positives = 294/388 (75%), Gaps = 1/388 (0%) Query: 5 INTRRRQVMLAGTALVAGGAPMLARAADVLKVGLIVPMSGPFASTGRQIEAAVKLYQQKY 64 + ++R ++ A AL+ G+ ++A A DV+K+GLIVPMSGPFASTGRQ++AAVKLY ++ Sbjct: 1 MQNKKRTLLKAAAALMLAGSSVIAHADDVVKIGLIVPMSGPFASTGRQVDAAVKLYIAQH 60 Query: 65 GDSVAGRKVEIVLKDDGGVSPDVTKRLAQELVSREKAQVLMGFGLTPLALAAAPIATQAK 124 GD+VAG+K+E++LKDD V PD TKRLAQEL+ ++ VL GFGLTPLALAAAP+ATQAK Sbjct: 61 GDTVAGKKIEVILKDDTNV-PDTTKRLAQELIVKDHVSVLAGFGLTPLALAAAPLATQAK 119 Query: 125 VPMIVTAAATSIIPQRSPYIVRTGFTLAQVTAPLASWAAKNGIKSVVTFVSDYGPGLDAE 184 VPMIV AAT++I ++SPYIVR+GFTL Q T +A WA KNGIK VVT V+DYGPG+DA+ Sbjct: 120 VPMIVMNAATAMITEQSPYIVRSGFTLPQNTLGIARWAPKNGIKKVVTLVADYGPGIDAQ 179 Query: 185 KVFVKTFGEAGGKVMESVRVPLRNPDYAPFLQRVKDAKPQALFVFVPSGEGAAVLKQFTE 244 F K F GG V+E +RVP+ NPD++PFLQ+V D KP ALF+FVPSG GA +KQF E Sbjct: 180 NSFKKVFEAEGGNVVEQLRVPVANPDFSPFLQKVADIKPDALFIFVPSGAGAVFMKQFAE 239 Query: 245 RGLAAAGIRLICTGDVLDDDLMAGIGAAAKDVVSSHHYSAVHPSAANKEYVEAMAKANKG 304 RGL+ GI+LI TGDV+DDD++ +G A V+S HY+A + N+ YV A KAN G Sbjct: 240 RGLSKQGIKLIGTGDVVDDDILNAMGDVALGAVTSMHYTAALDNPENRAYVAAFEKANPG 299 Query: 305 MRANFHSVGAYDGMHLLYESLKKTGGDADGDKLLAAMKGMSWESVRGPVTIDAATRDIVQ 364 MR NFHSVGAYDGMHL+Y +L+ T GD GDKLLAAMKG W S RGPV +D TR+++Q Sbjct: 300 MRPNFHSVGAYDGMHLIYAALQTTKGDTSGDKLLAAMKGQKWNSPRGPVELDPQTREMIQ 359 Query: 365 TVYMRKAELRGAEFYNVEFDQVEKVRDP 392 VY+ + E + +NV FD+VE V+DP Sbjct: 360 NVYISRTERVNGQLFNVSFDKVEAVKDP 387