BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0020.p (895 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777357.1| pyruvate dehydrogenase E1 component protein ... 1801 0.0 ref|YP_001630437.1| 2-oxoacid dehydrogenase subunit E1 [Bordetel... 1215 0.0 ref|YP_003977691.1| pyruvate dehydrogenase (acetyl-transferring)... 1204 0.0 ref|ZP_06686511.1| pyruvate decarboxylase, E1 component of the p... 1202 0.0 ref|NP_885388.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella ... 1193 0.0 ref|NP_890207.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella ... 1193 0.0 ref|NP_879900.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella ... 1192 0.0 ref|YP_556280.1| 2-oxoacid dehydrogenase subunit E1 [Burkholderi... 1184 0.0 ref|YP_561011.1| pyruvate dehydrogenase subunit E1 [Burkholderia... 1184 0.0 ref|YP_001897583.1| pyruvate dehydrogenase subunit E1 [Burkholde... 1178 0.0 >ref|YP_003777357.1| pyruvate dehydrogenase E1 component protein [Herbaspirillum seropedicae SmR1] gb|ADJ65449.1| pyruvate dehydrogenase E1 component protein [Herbaspirillum seropedicae SmR1] Length = 893 Score = 1801 bits (4666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 876/893 (98%), Positives = 883/893 (98%) Query: 3 MSRPSDSDIARDIDIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDA 62 MSRPSDSDIARDIDIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDA Sbjct: 1 MSRPSDSDIARDIDIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDA 60 Query: 63 RNTPYVNTIRPEQEPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFA 122 RNTPYVNTIRPEQEPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFA Sbjct: 61 RNTPYVNTIRPEQEPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFA 120 Query: 123 SAADLFEVGFNHFFRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEA 182 SAADLFEVGFNHFFRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEA Sbjct: 121 SAADLFEVGFNHFFRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEA 180 Query: 183 KRVGRQGLSSYPHPWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWG 242 KRVGRQGLSSYPHPWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWG Sbjct: 181 KRVGRQGLSSYPHPWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWG 240 Query: 243 VFGDGEMDEPESLAALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAG 302 VFGDGEMDEPESLAALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAG Sbjct: 241 VFGDGEMDEPESLAALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAG 300 Query: 303 WNVIKLLWGSDWDGLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRA 362 WNVIKLLWGSDWDGLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRA Sbjct: 301 WNVIKLLWGSDWDGLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRA 360 Query: 363 IGATLTDEEINRLRRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTT 422 IGATLTDEEINRLRRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTT Sbjct: 361 IGATLTDEEINRLRRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTT 420 Query: 423 HQQKKLDEESLLQFRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQ 482 HQQKKLDEESLLQFRDRFKLPL+DEQCRALAFYKPADDSPEMKHLHARRAAL GYLPRRQ Sbjct: 421 HQQKKLDEESLLQFRDRFKLPLSDEQCRALAFYKPADDSPEMKHLHARRAALSGYLPRRQ 480 Query: 483 AGQARRAVPPLAAHSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTF 542 AGQARRAVPPLAAHSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTF Sbjct: 481 AGQARRAVPPLAAHSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTF 540 Query: 543 GMANLFRQVGIYSSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYS 602 GMANLFRQVGIYSSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYS Sbjct: 541 GMANLFRQVGIYSSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYS 600 Query: 603 VHGTPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSL 662 VHGTPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSL Sbjct: 601 VHGTPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSL 660 Query: 663 VTAASIPNCVSYDPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEGVQE 722 VTAASIPNCVSYDPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEGVQ+ Sbjct: 661 VTAASIPNCVSYDPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEGVQD 720 Query: 723 GILRGMYCLGRKPGAQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTELARDGV 782 GILRG+YCL RKP AQ RLLGSGPILKEAVAA+ALLQQHWQIEAEVWSVTSYTELARDGV Sbjct: 721 GILRGLYCLARKPQAQARLLGSGPILKEAVAAAALLQQHWQIEAEVWSVTSYTELARDGV 780 Query: 783 AAQRAQRLSGSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGR 842 AAQRAQRL+GS PYVT QL+ SA PVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGR Sbjct: 781 AAQRAQRLAGSAALPYVTQQLQGSAVPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGR 840 Query: 843 SDTRVNLRDFFEIDARWIAYTALCEVWGNDRARLQEAARTLGIDTAKPLSSTV 895 SDTRVNLRDFFEIDARWIAYTALCEVWG+DRARLQEAARTLGIDTAKPLSSTV Sbjct: 841 SDTRVNLRDFFEIDARWIAYTALCEVWGDDRARLQEAARTLGIDTAKPLSSTV 893 >ref|YP_001630437.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella petrii DSM 12804] emb|CAP42168.1| Pyruvate dehydrogenase E1 component [Bordetella petrii] Length = 897 Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 602/852 (70%), Positives = 696/852 (81%), Gaps = 7/852 (0%) Query: 16 DIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDARNTPYVNTIRPEQ 75 DID ET EW +ALQS++ AG RA +++ +L A A GV + Y+NTI Sbjct: 18 DIDPAETAEWREALQSLVHAAGVPRAAYVVDQLLAQAAALGVRAAGQTRSAYLNTIPLRD 77 Query: 76 EPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFASAADLFEVGFNHF 135 EPPFPG AIEERIASI RWNALAMVVRAN+A+GELGGHIAS+ASAADLFEVGFNHF Sbjct: 78 EPPFPGD---LAIEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHF 134 Query: 136 FRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEAKRVGRQGLSSYPH 195 FRA + AGD+VY QPHSAPG+YARA+LEG L ED+LA++R+EI A+ G +GLSSYPH Sbjct: 135 FRASRDGAAGDLVYLQPHSAPGVYARAYLEGFLGEDELAHFRQEIAARARGLRGLSSYPH 194 Query: 196 PWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWGVFGDGEMDEPESL 255 PWLMP FWQFPTGSMGIGPINAIYQARF+RY+EHR L Q RKVWG+FGDGEMDEPES+ Sbjct: 195 PWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAQPSDRKVWGIFGDGEMDEPESI 254 Query: 256 AALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAGWNVIKLLWGSDWD 315 AAL+LA+REKLDNL+FVVNCNLQRLDGPVRGNG I+DELETL+AGAGWNVIKL+WG DWD Sbjct: 255 AALTLAAREKLDNLVFVVNCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWD 314 Query: 316 GLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRAIGATLTDEEINRL 375 L ARD G L A TVDGQ QTFAANDGA+NR HFF Q P A+ A +DE I+RL Sbjct: 315 ALLARDAGGALARAFAHTVDGQFQTFAANDGAYNRAHFFNQNPELAALVADWSDEAIDRL 374 Query: 376 RRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTTHQQKKLDEESLLQ 435 RRGGHD+ KI++AY A RHRGQPTVILAQTKKGYGMGAAG+GKMTTHQQKKLD+E+LL Sbjct: 375 RRGGHDIVKIHAAYHRAVRHRGQPTVILAQTKKGYGMGAAGQGKMTTHQQKKLDDETLLA 434 Query: 436 FRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQAGQARRAVPPLAA 495 FRDRF LP++D C AL FYKPA DS E+++L ARR ALGG+LPRR+ R VPP A Sbjct: 435 FRDRFALPISDADCLALKFYKPAADSAELRYLQARRQALGGHLPRRRTEAPRLPVPPAAQ 494 Query: 496 HSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTFGMANLFRQVGIYS 555 ++FAL+ADGKEMSSTMA+VR LG LLKD+ G+ +VPIVADEARTFGMANLFRQ+GIYS Sbjct: 495 WARFALQADGKEMSSTMAIVRMLGGLLKDEALGRRIVPIVADEARTFGMANLFRQIGIYS 554 Query: 556 SQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYSVHGTPMLPFYIYY 615 +QGQLYEPEDIGS+LYYREA DGQILEEGITEAGAISSWTAA T+YSV+G PMLPFYIYY Sbjct: 555 AQGQLYEPEDIGSVLYYREALDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYY 614 Query: 616 SMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSLVTAASIPNCVSYD 675 SMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDG+S + AA++PNC +YD Sbjct: 615 SMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGSSHLVAATVPNCRAYD 674 Query: 676 PAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLP-EGVQEGILRGMYCLGRK 734 PAYAYE+AVIL+ GM+RM++ D FYY+TVTNEN QP+LP E + GILRGM+ + Sbjct: 675 PAYAYEVAVILEHGMQRMLDEQHDEFYYLTVTNENLPQPTLPTEDARTGILRGMHRVRVA 734 Query: 735 PG-AQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTELARDGVAAQRAQRLSGS 793 PG AQVRLLG+GP+L EA+ A+ LLQ+H + AEVWSVTS++EL+RDG A +RA+ L G Sbjct: 735 PGSAQVRLLGAGPMLSEALRAADLLQEH-GVAAEVWSVTSFSELSRDGRACERARTL-GL 792 Query: 794 DGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGRSDTRVNLRDFF 853 D P Q APV+A SDY+R +PE IRA++ APY T+GTDGFGRSDTR LRDFF Sbjct: 793 DTPPAWVEQCLPGDAPVVAASDYVRAVPEQIRAWIAAPYRTVGTDGFGRSDTRARLRDFF 852 Query: 854 EIDARWIAYTAL 865 E+ A WIA AL Sbjct: 853 EVGADWIALQAL 864 >ref|YP_003977691.1| pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1 [Achromobacter xylosoxidans A8] gb|ADP14976.1| pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1 [Achromobacter xylosoxidans A8] Length = 903 Score = 1204 bits (3116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 602/877 (68%), Positives = 697/877 (79%), Gaps = 17/877 (1%) Query: 16 DIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDARNTPYVNTIRPEQ 75 D D ET EW ALQ+++ G ERA ++L L A G+ T Y+NTI +Q Sbjct: 26 DADPAETAEWRDALQALVQAEGSERAGYVLDNLLGHAASLGLRANSQTRTAYLNTIPADQ 85 Query: 76 EPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFASAADLFEVGFNHF 135 EPPFPG A+EERIA I RWNALAMVVRAN+A+GELGGHIAS+ASAADLFEVGFNHF Sbjct: 86 EPPFPGN---LAVEERIARINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHF 142 Query: 136 FRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEAKRVGRQGLSSYPH 195 FRA+ + GD+VY QPHSAPG+YARA+LEG L E+DLA++R+EI A G +GLSSYPH Sbjct: 143 FRAQSQDGPGDLVYMQPHSAPGVYARAYLEGFLGEEDLAHFRQEITASARGLRGLSSYPH 202 Query: 196 PWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWGVFGDGEMDEPESL 255 PWLMP FWQFPTGSMGIGPINAIYQARF+RY+EHR L+ RKVWG+FGDGEMDEPES+ Sbjct: 203 PWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLVPGGDRKVWGIFGDGEMDEPESI 262 Query: 256 AALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAGWNVIKLLWGSDWD 315 AAL+LA+REKLDNL+FVVNCNLQRLDGPVRGNG I+DELETL+AGAGWNVIKL+WGSDWD Sbjct: 263 AALTLAAREKLDNLVFVVNCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGSDWD 322 Query: 316 GLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRAIGATLTDEEINRL 375 L RD +G L A TVDGQ QTFAANDGAFNR HFF Q P A+ A +DE I+RL Sbjct: 323 ALLRRDTNGALARAFANTVDGQFQTFAANDGAFNRAHFFNQNPELAALVADWSDEAIDRL 382 Query: 376 RRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTTHQQKKLDEESLLQ 435 RGGHDM KI++AY AA HRGQPTVILAQTKKG+GMG+AG+GKMTTHQQKKLD+E+LL Sbjct: 383 HRGGHDMVKIHAAYHRAASHRGQPTVILAQTKKGFGMGSAGQGKMTTHQQKKLDDEALLA 442 Query: 436 FRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQAGQARRAVPPLAA 495 FRDRF LP++D C AL FY+PA+DS E++HL ARRAALGG++PRR +A R PP A Sbjct: 443 FRDRFALPISDADCLALKFYRPAEDSAELRHLQARRAALGGHIPRRNT-EAPRLAPPDAE 501 Query: 496 H-SKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTFGMANLFRQVGIY 554 H ++FAL ADGKEMSSTMA+VR L LLKD G +VPIVADEARTFGMANLFRQ+GIY Sbjct: 502 HWARFALAADGKEMSSTMAIVRMLTALLKDAAVGPRIVPIVADEARTFGMANLFRQIGIY 561 Query: 555 SSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYSVHGTPMLPFYIY 614 S+QGQLYEPEDIGS+LYYREA+DGQILEEGITEAGAISSWTAA T+YSV+G PMLPFYIY Sbjct: 562 SAQGQLYEPEDIGSVLYYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIY 621 Query: 615 YSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSLVTAASIPNCVSY 674 YSMFGFQRIGDLIWAAADQR RGFLIGATSGRTTLGGEGLQHQDG+S + AA++PNC +Y Sbjct: 622 YSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGSSHIIAATVPNCRAY 681 Query: 675 DPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEG--VQEGILRGMYCLG 732 DPAYA+E+AVI++ GMRRM++ D FYY+TVTNEN AQP +P G V+EGILRGMY L Sbjct: 682 DPAYAFEVAVIVEHGMRRMLDEQRDEFYYLTVTNENLAQPDMPAGEDVREGILRGMYRL- 740 Query: 733 RKPG---AQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTELARDGVAAQRAQR 789 +P AQVRLLG+GP+L+EA A+ LQ + ++AEVWSVTSY+ELAR G A+RA+ Sbjct: 741 -RPARAQAQVRLLGAGPMLREAELAAERLQADYGVDAEVWSVTSYSELARAGREAERARA 799 Query: 790 LSGSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGRSDTRVNL 849 L +V L S APV+A SDY+R +PE IRA+ PAPY TLGTDGFGRSDTR L Sbjct: 800 LGLPASVDWVRTCLGASNAPVVAASDYVRAVPEQIRAWAPAPYRTLGTDGFGRSDTRAQL 859 Query: 850 RDFFEIDARWIAYTALCEVWGND-----RARLQEAAR 881 RDFFE+ A WI AL + RARL AR Sbjct: 860 RDFFEVSADWIVLHALDSLDRQQDAQALRARLNAGAR 896 >ref|ZP_06686511.1| pyruvate decarboxylase, E1 component of the pyruvate dehydrogenase complex [Achromobacter piechaudii ATCC 43553] gb|EFF76569.1| pyruvate decarboxylase, E1 component of the pyruvate dehydrogenase complex [Achromobacter piechaudii ATCC 43553] Length = 895 Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 602/871 (69%), Positives = 694/871 (79%), Gaps = 13/871 (1%) Query: 2 DMSRPSDSDIARDIDIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRD 61 D S+P+ R ID D ET EW ALQS++ G RA ++L L A G+ Sbjct: 3 DQSQPAPGH-DRPIDADPAETAEWRDALQSLVEADGAGRAGYVLDSLLGHAASLGLRANS 61 Query: 62 ARNTPYVNTIRPEQEPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASF 121 T Y+NTI +QEPPFPG A+EERIA I RWNALAMVVRAN+A+GELGGHIAS+ Sbjct: 62 QTRTAYLNTIPADQEPPFPGN---LAVEERIARINRWNALAMVVRANQAHGELGGHIASY 118 Query: 122 ASAADLFEVGFNHFFRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIE 181 ASAADLFEVGFNHFFRA+ GD+VY QPHSAPG+YARAFLEG LSEDDLA++R+EI Sbjct: 119 ASAADLFEVGFNHFFRAQSPDGLGDLVYMQPHSAPGVYARAFLEGFLSEDDLAHFRQEIT 178 Query: 182 AKRVGRQGLSSYPHPWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVW 241 A G +GLSSYPHPWLMP FWQFPTGSMGIGPINAIYQARF+RY+EHR L+ RKVW Sbjct: 179 ATTRGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLVPASDRKVW 238 Query: 242 GVFGDGEMDEPESLAALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGA 301 G+FGDGEMDEPES+AAL+LA+REKLDNL+FVVNCNLQRLDGPVRGNG I+DELETL+AGA Sbjct: 239 GIFGDGEMDEPESIAALTLAAREKLDNLVFVVNCNLQRLDGPVRGNGRIIDELETLYAGA 298 Query: 302 GWNVIKLLWGSDWDGLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTR 361 GWNVIKL+WGSDWD L RD +G L A TVDGQ QTFAANDGAFNR HFF Q P Sbjct: 299 GWNVIKLVWGSDWDALLRRDTNGALARAFANTVDGQFQTFAANDGAFNRAHFFNQNPELA 358 Query: 362 AIGATLTDEEINRLRRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMT 421 A+ A TDE I+RL RGGHDM KI++AY AARH GQPTVILAQTKKG+GMGAAG+GKMT Sbjct: 359 ALVADWTDEAIDRLHRGGHDMVKIHAAYHRAARHTGQPTVILAQTKKGFGMGAAGQGKMT 418 Query: 422 THQQKKLDEESLLQFRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRR 481 THQQKKLD+E+LL FRDRF LP++D C AL FY+PA DS E++HL ARR ALGG++PRR Sbjct: 419 THQQKKLDDEALLAFRDRFALPISDADCLALKFYRPAPDSAELRHLQARREALGGHIPRR 478 Query: 482 QAGQARRAVPPLAAHSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEART 541 + R A P + ++FAL ADGKEMSSTMA+VR L LLKD + G +VPIVADEART Sbjct: 479 RTEAPRLAAPAVEQWARFALAADGKEMSSTMAIVRMLTALLKDGEVGSRIVPIVADEART 538 Query: 542 FGMANLFRQVGIYSSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAY 601 FGMANLFRQ+GIYS+QGQLYEPEDIGS+LYYREA+DGQILEEGITEAGAISSWTAA T+Y Sbjct: 539 FGMANLFRQIGIYSAQGQLYEPEDIGSVLYYREARDGQILEEGITEAGAISSWTAAGTSY 598 Query: 602 SVHGTPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNS 661 SV+G PMLPFYIYYSMFGFQRIGDLIWAAADQR RGFLIGATSGRTTLGGEGLQHQDG+S Sbjct: 599 SVNGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGSS 658 Query: 662 LVTAASIPNCVSYDPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPE--G 719 + AA++PNC +YDPAYAYE+AVI++ GM RM++ D F+Y+TVTNEN AQP +P G Sbjct: 659 HIMAAAVPNCRAYDPAYAYEVAVIVEHGMHRMLDEQRDEFFYLTVTNENLAQPDMPADPG 718 Query: 720 VQEGILRGMYCL--GRKPGAQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTEL 777 V+EGILRG+Y L RK AQVRLLG+GP+L+EA A+ L + ++AEVWSVTS++EL Sbjct: 719 VREGILRGLYRLRPARKE-AQVRLLGAGPMLREAEVAAERLHADYGVDAEVWSVTSFSEL 777 Query: 778 ARDGVAAQRAQRLSGSDG---EPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVT 834 ARDG A+RA R+ G D +V L S APVIA +DY+R +PE IRA+VPA Y T Sbjct: 778 ARDGRQAERA-RVLGLDTAGQADWVRTCLGASDAPVIAATDYVRAVPEQIRAWVPASYRT 836 Query: 835 LGTDGFGRSDTRVNLRDFFEIDARWIAYTAL 865 LGTDGFGRSDTR LRDFFE+ A WI AL Sbjct: 837 LGTDGFGRSDTRAQLRDFFEVSADWIVLYAL 867 >ref|NP_885388.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella parapertussis 12822] emb|CAE38505.1| pyruvate dehydrogenase E1 component [Bordetella parapertussis] Length = 925 Score = 1193 bits (3086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 592/855 (69%), Positives = 687/855 (80%), Gaps = 9/855 (1%) Query: 16 DIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDARNTPYVNTIRPEQ 75 D D ET EW +AL S+ GPERA ++L +L A A GV T Y+NTI +Q Sbjct: 42 DPDPVETAEWREALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQ 101 Query: 76 EPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFASAADLFEVGFNHF 135 +PPFPG ++EERIASI RWNALAMVVRAN+A+GELGGHIAS+ASAADLFEVGFNHF Sbjct: 102 DPPFPGN---LSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHF 158 Query: 136 FRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEAKRVGRQGLSSYPH 195 FRA F GD+VY QPHSAPGIYARA+LEG LS+ DLA++R+EI A G +GLSSYPH Sbjct: 159 FRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLSDVDLAHFRQEITAGAQGLRGLSSYPH 218 Query: 196 PWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWGVFGDGEMDEPESL 255 PWLMP FWQFPTGSMGIGPINAIYQARF+RY+EHR L RKVWG+FGDGEMDEPES+ Sbjct: 219 PWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESI 278 Query: 256 AALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAGWNVIKLLWGSDWD 315 AAL+LA+RE+LDNL+FV+NCNLQRLDGPVRGNG I+DELETL+AGAGWNVIKL+WG DWD Sbjct: 279 AALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWD 338 Query: 316 GLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRAIGATLTDEEINRL 375 L RD DG L + TVDGQ QTFAANDGA+NRQHFFGQ P A+ A +DE I+RL Sbjct: 339 ALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRL 398 Query: 376 RRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTTHQQKKLDEESLLQ 435 RRGGHDM KI++AY A HRGQPTVILAQTKKG+GMG AG+GKMTTHQQKKLD+E+LL Sbjct: 399 RRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLA 458 Query: 436 FRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQAGQARRAVPPLAA 495 FRDRF LP++D C AL FYKPA+DS E+++L +RRAALGGYLPRR+ R A PP+A Sbjct: 459 FRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVAD 518 Query: 496 HSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTFGMANLFRQVGIYS 555 ++FAL+A GKEMSSTMA+VR L LLKD G +VPIVADEARTFGMANLFRQVGIYS Sbjct: 519 WARFALQASGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYS 578 Query: 556 SQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYSVHGTPMLPFYIYY 615 +QGQLYEPEDIGS+L YREA+DGQILEEGITEAGAISSWTAA T+YSV+G PMLPFYIYY Sbjct: 579 AQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYY 638 Query: 616 SMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSLVTAASIPNCVSYD 675 SMFGFQRIGDLIWAAADQR RGFLIGATSGRTTLGGEGLQHQDG S + AA++PNC +YD Sbjct: 639 SMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYD 698 Query: 676 PAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEG--VQEGILRGMYCLGR 733 PAYAYE+AV+++ GM+RM++ D FYY+TVTNEN AQP +PEG + GILRGM+ + Sbjct: 699 PAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRA 758 Query: 734 KPGA-QVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTELARDGVAAQRAQRLS- 791 G QVRLLG+GP+L EA+ A+ LL+ ++AEVWSVTS++ELAR G A+RAQ L Sbjct: 759 ADGTPQVRLLGAGPMLDEAMRAAQLLRDEHGVDAEVWSVTSFSELARGGRGAERAQALGL 818 Query: 792 -GSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGRSDTRVNLR 850 DG ++ L D A PV+AVSDY+R +PE IRA+VP PY LGTD FGRSDTR LR Sbjct: 819 PCPDGN-WLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDDFGRSDTRARLR 877 Query: 851 DFFEIDARWIAYTAL 865 DFFE+ A WI AL Sbjct: 878 DFFEVGAPWIVLHAL 892 >ref|NP_890207.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella bronchiseptica RB50] emb|CAE35645.1| pyruvate dehydrogenase E1 component [Bordetella bronchiseptica RB50] Length = 898 Score = 1193 bits (3086), Expect = 0.0, Method: Compositional matrix adjust. Identities = 592/855 (69%), Positives = 687/855 (80%), Gaps = 9/855 (1%) Query: 16 DIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDARNTPYVNTIRPEQ 75 D D ET EW +AL S+ GPERA ++L +L A A GV T Y+NTI +Q Sbjct: 15 DPDPVETAEWREALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQ 74 Query: 76 EPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFASAADLFEVGFNHF 135 EPPFPG ++EERIASI RWNALAMVVRAN+A+GELGGHIAS+ASAADLFEVGFNHF Sbjct: 75 EPPFPGN---LSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHF 131 Query: 136 FRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEAKRVGRQGLSSYPH 195 FRA F GD+VY QPHSAPGIYARA+LEG L++ DLA++R+EI A G +GLSSYPH Sbjct: 132 FRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPH 191 Query: 196 PWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWGVFGDGEMDEPESL 255 PWLMP FWQFPTGSMGIGPINAIYQARF+RY+EHR L RKVWG+FGDGEMDEPES+ Sbjct: 192 PWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESI 251 Query: 256 AALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAGWNVIKLLWGSDWD 315 AAL+LA+RE+LDNL+FV+NCNLQRLDGPVRGNG I+DELETL+AGAGWNVIKL+WG DWD Sbjct: 252 AALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWD 311 Query: 316 GLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRAIGATLTDEEINRL 375 L RD DG L + TVDGQ QTFAANDGA+NRQHFFGQ P A+ A +DE I+RL Sbjct: 312 ALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRL 371 Query: 376 RRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTTHQQKKLDEESLLQ 435 RRGGHDM KI++AY A HRGQPTVILAQTKKG+GMG AG+GKMTTHQQKKLD+E+LL Sbjct: 372 RRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLA 431 Query: 436 FRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQAGQARRAVPPLAA 495 FRDRF LP++D C AL FYKPA+DS E+++L +RRAALGGYLPRR+ R A PP+A Sbjct: 432 FRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVAD 491 Query: 496 HSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTFGMANLFRQVGIYS 555 ++FAL+A GKEMSSTMA+VR L LLKD G +VPIVADEARTFGMANLFRQVGIYS Sbjct: 492 WARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYS 551 Query: 556 SQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYSVHGTPMLPFYIYY 615 +QGQLYEPEDIGS+L YREA+DGQILEEGITEAGAISSWTAA T+YSV+G PMLPFYIYY Sbjct: 552 AQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYY 611 Query: 616 SMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSLVTAASIPNCVSYD 675 SMFGFQRIGDLIWAAADQR RGFLIGATSGRTTLGGEGLQHQDG S + AA++PNC +YD Sbjct: 612 SMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYD 671 Query: 676 PAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEG--VQEGILRGMYCL-G 732 PAYAYE+AV+++ GM+RM++ D FYY+TVTNEN AQP +PEG + GILRGM+ + Sbjct: 672 PAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRA 731 Query: 733 RKPGAQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTELARDGVAAQRAQRLS- 791 QVRLLG+GP+L EA+ A+ LL+ ++AEVWSVTS++ELAR G A+RAQ L Sbjct: 732 ADATPQVRLLGAGPMLDEAMRAAQLLRDEHGVDAEVWSVTSFSELARGGRGAERAQALGL 791 Query: 792 -GSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGRSDTRVNLR 850 DG ++ L D A PV+AVSDY+R +PE IRA+VP PY LGTDGFGRSDTR LR Sbjct: 792 PCPDGN-WLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGRSDTRARLR 850 Query: 851 DFFEIDARWIAYTAL 865 DFFE+ A WI AL Sbjct: 851 DFFEVGAPWIVLHAL 865 >ref|NP_879900.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella pertussis Tohama I] emb|CAE41419.1| pyruvate dehydrogenase E1 component [Bordetella pertussis Tohama I] gb|AEE66521.1| 2-oxoacid dehydrogenase subunit E1 [Bordetella pertussis CS] Length = 898 Score = 1192 bits (3083), Expect = 0.0, Method: Compositional matrix adjust. Identities = 591/855 (69%), Positives = 686/855 (80%), Gaps = 9/855 (1%) Query: 16 DIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDARNTPYVNTIRPEQ 75 D D ET EW +AL S+ GPERA ++L +L A A GV T Y+NTI +Q Sbjct: 15 DPDPVETAEWCEALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQ 74 Query: 76 EPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFASAADLFEVGFNHF 135 EPPFPG ++EERIASI RWNALAMVVRAN+A+GELGGHIAS+ASAADLFEVGFNHF Sbjct: 75 EPPFPGN---LSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHF 131 Query: 136 FRARDEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEAKRVGRQGLSSYPH 195 FRA F GD+VY QPHSAPGIYARA+LEG L++ DLA++R+EI A G +GLSSYPH Sbjct: 132 FRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPH 191 Query: 196 PWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWGVFGDGEMDEPESL 255 PWLMP FWQFPTGSMGIGPINAIYQARF+RY+EHR L RKVWG+FGDGEMDEPES+ Sbjct: 192 PWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESI 251 Query: 256 AALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAGWNVIKLLWGSDWD 315 AAL+LA+RE+LDNL+FV+NCNLQRLDGPVRGNG I+DELETL+AGAGWNVIKL+WG DWD Sbjct: 252 AALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWD 311 Query: 316 GLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRAIGATLTDEEINRL 375 L RD DG L + TVDGQ QTFAANDGA+NRQHFFGQ P A+ A +DE I+RL Sbjct: 312 ALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRL 371 Query: 376 RRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTTHQQKKLDEESLLQ 435 RRGGHDM KI++AY A HRGQPTVILAQTKKG+GMG AG+GKMTTHQQKKLD+E+LL Sbjct: 372 RRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLA 431 Query: 436 FRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQAGQARRAVPPLAA 495 FRDRF LP++D C AL FYKPA+DS E+++L +RRAALGGYLPRR+ R A PP+A Sbjct: 432 FRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVAD 491 Query: 496 HSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTFGMANLFRQVGIYS 555 ++FAL+A GKEMSSTMA+VR L LLKD G +VPIVADEARTFGMANLFRQVGIYS Sbjct: 492 WARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYS 551 Query: 556 SQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYSVHGTPMLPFYIYY 615 +QGQLYEPEDIGS+L YREA+DGQILEEGITEAGAISSWTAA T+YSV+G PMLPFYIYY Sbjct: 552 AQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYY 611 Query: 616 SMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSLVTAASIPNCVSYD 675 SMFGFQRIGDLIWAAADQR RGFLIGATSGRTTLGGEGLQHQDG S + AA++PNC +YD Sbjct: 612 SMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYD 671 Query: 676 PAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEG--VQEGILRGMYCL-G 732 PAYAYE+AV+++ GM+RM++ D FYY+TVTNEN AQP +PEG + GILRGM+ + Sbjct: 672 PAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRA 731 Query: 733 RKPGAQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTELARDGVAAQRAQRLS- 791 QVRLLG+GP+L EA+ A+ LL+ ++AEVWSVTS++ELAR G A+RAQ L Sbjct: 732 ADATPQVRLLGAGPMLDEAMRAAQLLRDEHGLDAEVWSVTSFSELARGGRGAERAQALGL 791 Query: 792 -GSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGRSDTRVNLR 850 DG ++ L D A PV+AVSDY+R +PE IRA+VP PY LGTDGFG SDTR LR Sbjct: 792 PCPDGN-WLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGHSDTRARLR 850 Query: 851 DFFEIDARWIAYTAL 865 DFFE+ A WI AL Sbjct: 851 DFFEVGAPWIVLHAL 865 >ref|YP_556280.1| 2-oxoacid dehydrogenase subunit E1 [Burkholderia xenovorans LB400] gb|ABE36930.1| 2-oxo-acid dehydrogenase E1 component homodimeric type [Burkholderia xenovorans LB400] Length = 906 Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/861 (67%), Positives = 687/861 (79%), Gaps = 19/861 (2%) Query: 16 DIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDARNTPYVNTIRPEQ 75 D D +ET EWL+AL +V A G +RA++L RL+A A GV R TPY+NTI + Sbjct: 20 DSDPEETAEWLEALDAVAAHVGRDRAQYLFDRLAAHALSLGVESSRTRVTPYINTIGFNE 79 Query: 76 EPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFASAADLFEVGFNHF 135 +P +PG + +EER+A+ +RWNALAMVVRAN+AYGELGGHIAS+ASAADLFEVGFNHF Sbjct: 80 QPRYPGNLE---LEERLAAALRWNALAMVVRANKAYGELGGHIASYASAADLFEVGFNHF 136 Query: 136 FRARDEQ----FAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEAKRVGRQGLS 191 FRA ++Q GD+VYFQPHS+PG+YARA+LEG L E+ L +YRREI GL Sbjct: 137 FRASNQQAGEGSGGDLVYFQPHSSPGVYARAYLEGFLGEEHLQHYRREIAGP-----GLC 191 Query: 192 SYPHPWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWGVFGDGEMDE 251 SYPHPWLMP FWQFPTGSMGIGPIN+IYQARF+RY+++RGL Q +GRKVWG FGDGEMDE Sbjct: 192 SYPHPWLMPDFWQFPTGSMGIGPINSIYQARFMRYLQNRGLAQTEGRKVWGFFGDGEMDE 251 Query: 252 PESLAALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAGWNVIKLLWG 311 PESL ALSLA+RE LDNL+FV+NCNLQRLDGPVR NG I+DELE F GAGWNVIK++WG Sbjct: 252 PESLGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAHFNGAGWNVIKVVWG 311 Query: 312 SDWDGLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRAIGATLTDEE 371 SDWD LFARD+ G L+ A TVDGQ QTF+ANDGA+NR+ FFGQ P A+ A L+DEE Sbjct: 312 SDWDALFARDRTGALMRAFAHTVDGQFQTFSANDGAYNRERFFGQNPELAALAAQLSDEE 371 Query: 372 INRLRRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTTHQQKKLDEE 431 I+RLRRGGHD++K+++AY A HR QPTVILA+T KG+GMG +G+G+MTTHQQKKLD + Sbjct: 372 IDRLRRGGHDVRKLHAAYAKALSHRDQPTVILAKTMKGFGMGTSGQGRMTTHQQKKLDFD 431 Query: 432 SLLQFRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQAGQAR-RAV 490 L FRDRF+LPL+DE + FYKPA+DSPEM++LHARRAALGGYLPRR+ ++ V Sbjct: 432 DLKAFRDRFRLPLSDEDVEQVKFYKPAEDSPEMRYLHARRAALGGYLPRRRRVASKGLTV 491 Query: 491 PPLAAHSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTFGMANLFRQ 550 P + ++FALEA+G+EMS+TMALVR L LLKD + GQ +VPIVADEARTFGMAN+FRQ Sbjct: 492 PSMQTWAQFALEANGREMSTTMALVRMLTALLKDAEIGQRMVPIVADEARTFGMANMFRQ 551 Query: 551 VGIYSSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYSVHGTPMLP 610 VGIYS GQLYEPED+GS+LYYRE +GQILEEGI+EAGAISSW AAAT+YSVH PMLP Sbjct: 552 VGIYSPLGQLYEPEDLGSMLYYREDTNGQILEEGISEAGAISSWIAAATSYSVHDLPMLP 611 Query: 611 FYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSLVTAASIPN 670 FYIYYSMFGFQR+GD+IWAAADQRARGFLIGATSG+TTLGGEGLQHQDG S + A++IPN Sbjct: 612 FYIYYSMFGFQRVGDIIWAAADQRARGFLIGATSGKTTLGGEGLQHQDGTSHLAASTIPN 671 Query: 671 CVSYDPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPEGV----QEGILR 726 C +YDPA AYE+AVI+DEGMR M+ER DVFYY+TV NEN AQPS P GV +EGIL+ Sbjct: 672 CRAYDPALAYEVAVIVDEGMREMVERQHDVFYYVTVMNENYAQPSAPPGVTQALREGILK 731 Query: 727 GMYCLG--RKPGAQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTELARDGVAA 784 G+Y L RK A+V+LLG+G I E +AA +LQ W IEA VWSVTS+TEL RDG+A Sbjct: 732 GIYPLSSERKATARVQLLGAGAIFGEVLAAQQMLQDDWNIEAAVWSVTSFTELQRDGIAC 791 Query: 785 QRAQRLSGSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGTDGFGRSD 844 +R QRL PYVTA L S P+IA +DY+R +PE IRAFVP YVTLGTDGFGRSD Sbjct: 792 ERHQRLGDMSDVPYVTAALGMSHGPIIAATDYVRAVPELIRAFVPRRYVTLGTDGFGRSD 851 Query: 845 TRVNLRDFFEIDARWIAYTAL 865 TR LR+FFE+D I AL Sbjct: 852 TRQALREFFEVDRASIVIAAL 872 >ref|YP_561011.1| pyruvate dehydrogenase subunit E1 [Burkholderia xenovorans LB400] gb|ABE32959.1| 2-oxo-acid dehydrogenase E1 component homodimeric type [Burkholderia xenovorans LB400] Length = 913 Score = 1184 bits (3062), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/868 (66%), Positives = 691/868 (79%), Gaps = 20/868 (2%) Query: 10 DIARDIDIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDARNTPYVN 69 D D D QET EWLQAL V+A G +RA+FL +L++ A GV TPY N Sbjct: 20 DTTEQADTDPQETAEWLQALDGVVAHVGRDRAQFLFDKLASHALSLGVESARTSVTPYQN 79 Query: 70 TIRPEQEPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFASAADLFE 129 TI EQ+P +PG + +EER+A+ +RWNALAMVVRAN+AYGELGGHIAS+ASAADLFE Sbjct: 80 TIPFEQQPRYPGNLE---LEERLAAALRWNALAMVVRANKAYGELGGHIASYASAADLFE 136 Query: 130 VGFNHFFRAR---DEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRREIEAKRVG 186 VGFNHFFRA E+ GD+VYFQPHS+PG+YARA+LEG LSE++L YYRREI G Sbjct: 137 VGFNHFFRATAPGGEEGTGDLVYFQPHSSPGVYARAYLEGFLSEENLQYYRREI-----G 191 Query: 187 RQGLSSYPHPWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRKVWGVFGD 246 GL SYPHPWLMP FWQFPTGSMGIGPINAIYQARF+RY+ +RGL+Q +GRKVWG FGD Sbjct: 192 GPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLANRGLVQTEGRKVWGFFGD 251 Query: 247 GEMDEPESLAALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFAGAGWNVI 306 GEMDEPES ALSLA+RE LDNL+FV+NCNLQRLDGPVR NG I+DELE F GAGWNVI Sbjct: 252 GEMDEPESTGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAHFIGAGWNVI 311 Query: 307 KLLWGSDWDGLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPGTRAIGAT 366 K++WGSDWD LF+RD+ G L+ A TVDGQ QTF+ANDGA+NR+ FFGQ P A+ A Sbjct: 312 KVIWGSDWDALFSRDRTGALLRAFAHTVDGQFQTFSANDGAYNRERFFGQNPELAALAAQ 371 Query: 367 LTDEEINRLRRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGKMTTHQQK 426 L+D++I+RLRRGGHD++K+++AY A H GQPTVILA+T KG+GMG +G+G+MTTHQQK Sbjct: 372 LSDDDIDRLRRGGHDVRKLHAAYANALAHHGQPTVILAKTMKGFGMGTSGQGRMTTHQQK 431 Query: 427 KLDEESLLQFRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLPRRQAGQA 486 KLD + L FRDRF+LPLTDE + FYKPA+DSPEM++LHARRAALGGYLPRR+ + Sbjct: 432 KLDFDDLKAFRDRFRLPLTDEDVEQVKFYKPAEDSPEMQYLHARRAALGGYLPRRRRVAS 491 Query: 487 R-RAVPPLAAHSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADEARTFGMA 545 + VPP+++ +FALE++G+EMS+TMALVR L LLKD++ G VVPIVADEARTFGMA Sbjct: 492 KGLIVPPVSSWGQFALESNGREMSTTMALVRMLTALLKDQEVGPRVVPIVADEARTFGMA 551 Query: 546 NLFRQVGIYSSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAATAYSVHG 605 N+FRQVGIYS GQLYEPED+GS+LYYRE GQILEEGI+EAGA+SSW AAAT+YSVH Sbjct: 552 NMFRQVGIYSPLGQLYEPEDLGSMLYYREDTKGQILEEGISEAGAVSSWIAAATSYSVHD 611 Query: 606 TPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGNSLVTA 665 PMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSG+TTLGGEGLQHQDG S + A Sbjct: 612 LPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGKTTLGGEGLQHQDGTSHLAA 671 Query: 666 ASIPNCVSYDPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSL----PEGVQ 721 ++IPNC +YDPA+AYE+A I+DEGMR M+E+ DVFYY+TV NEN AQPS+ PE ++ Sbjct: 672 STIPNCRAYDPAFAYEVAAIVDEGMREMVEQQRDVFYYVTVMNENYAQPSVPGDSPEALR 731 Query: 722 EGILRGMYCLG----RKPGAQVRLLGSGPILKEAVAASALLQQHWQIEAEVWSVTSYTEL 777 EGIL+G+Y L A+V+LLG+G IL E +AA +L+ WQI+A VWSVTS+TEL Sbjct: 732 EGILKGIYPLAAQAQESTQARVQLLGAGAILGEVIAARQMLKDDWQIDAAVWSVTSFTEL 791 Query: 778 ARDGVAAQRAQRLSGSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRAFVPAPYVTLGT 837 RDG+AA+R RL G PYVT L S P+IA +DY+R +PE IRA+VP YVTLGT Sbjct: 792 QRDGMAAERLARLGEETGTPYVTRALEASQGPIIAATDYVRAVPELIRAYVPRRYVTLGT 851 Query: 838 DGFGRSDTRVNLRDFFEIDARWIAYTAL 865 DGFGRSDTR LR+FFE+D + I AL Sbjct: 852 DGFGRSDTRQALREFFEVDRKAIVIAAL 879 >ref|YP_001897583.1| pyruvate dehydrogenase subunit E1 [Burkholderia phytofirmans PsJN] gb|ACD18359.1| 2-oxo-acid dehydrogenase E1 subunit, homodimeric type [Burkholderia phytofirmans PsJN] Length = 917 Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/879 (65%), Positives = 697/879 (79%), Gaps = 24/879 (2%) Query: 3 MSRPSDSDIARDIDIDSQETQEWLQALQSVLAEAGPERARFLLSRLSAAAQQWGVNWRDA 62 +S P + A D D QET EWL+AL +V+A G +RA+FL +L++ A GV Sbjct: 13 LSNPQRVESAEQADTDPQETAEWLEALDAVVAHVGRDRAQFLFDKLASHALSLGVESART 72 Query: 63 RNTPYVNTIRPEQEPPFPGGSDAQAIEERIASIMRWNALAMVVRANRAYGELGGHIASFA 122 TPY NTI EQ+P +PG + +EER+A+ +RWNALAMVVRAN+AYGELGGHIAS+A Sbjct: 73 NVTPYQNTIPFEQQPRYPGNLE---LEERLAAALRWNALAMVVRANQAYGELGGHIASYA 129 Query: 123 SAADLFEVGFNHFFRAR---DEQFAGDVVYFQPHSAPGIYARAFLEGALSEDDLAYYRRE 179 SAADLFEVGFNHFFRA E+ GD+VYFQPHS+PG+YARA+LEG LSE L +YRRE Sbjct: 130 SAADLFEVGFNHFFRAAAPGGEEGTGDLVYFQPHSSPGVYARAYLEGFLSEQHLQHYRRE 189 Query: 180 IEAKRVGRQGLSSYPHPWLMPQFWQFPTGSMGIGPINAIYQARFLRYMEHRGLLQDQGRK 239 I G GL SYPHPWLMP FWQFPTGSMGIGPINAIYQARF+RY+ +RGL+Q +GRK Sbjct: 190 I-----GGPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLANRGLVQTEGRK 244 Query: 240 VWGVFGDGEMDEPESLAALSLASREKLDNLIFVVNCNLQRLDGPVRGNGHIVDELETLFA 299 VWG FGDGEMDEPES ALSLA+RE LDNL+FV+NCNLQRLDGPVR NG I+DELE F Sbjct: 245 VWGFFGDGEMDEPESTGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAHFI 304 Query: 300 GAGWNVIKLLWGSDWDGLFARDKDGELVDALNRTVDGQLQTFAANDGAFNRQHFFGQTPG 359 GAGWNVIK++WGSDWD LF+RD+ G L+ A TVDGQ QTF+ANDGA+NR+ FFGQ P Sbjct: 305 GAGWNVIKVIWGSDWDALFSRDRTGALLRAFAHTVDGQFQTFSANDGAYNRERFFGQNPE 364 Query: 360 TRAIGATLTDEEINRLRRGGHDMKKIYSAYQAAARHRGQPTVILAQTKKGYGMGAAGEGK 419 A+ A L+D++I+RLRRGGHD++K+++AY A HRGQPTVILA+T KG+GMG +G+G+ Sbjct: 365 LAALAAQLSDDDIDRLRRGGHDVRKLHAAYAKALEHRGQPTVILAKTMKGFGMGTSGQGR 424 Query: 420 MTTHQQKKLDEESLLQFRDRFKLPLTDEQCRALAFYKPADDSPEMKHLHARRAALGGYLP 479 MTTHQQKKL + L FRDRF+LPLTDE + FYKPA+DSPEM++LHARRAALGGYLP Sbjct: 425 MTTHQQKKLGFDDLKAFRDRFRLPLTDEDVEQVKFYKPAEDSPEMQYLHARRAALGGYLP 484 Query: 480 RRQAGQAR-RAVPPLAAHSKFALEADGKEMSSTMALVRQLGNLLKDKDFGQYVVPIVADE 538 RR+ ++ VPP+++ +F+L+++G+EMS+TMALVR L LLKD++ G VVPIVADE Sbjct: 485 RRRRVASKGLTVPPVSSWGQFSLDSNGREMSTTMALVRMLTALLKDQEVGPRVVPIVADE 544 Query: 539 ARTFGMANLFRQVGIYSSQGQLYEPEDIGSILYYREAKDGQILEEGITEAGAISSWTAAA 598 ARTFGMAN+FRQVGIYS GQLYEPED+GS+LYYRE GQILEEGI+EAGA+SSW AAA Sbjct: 545 ARTFGMANMFRQVGIYSPLGQLYEPEDLGSMLYYREDTKGQILEEGISEAGAVSSWIAAA 604 Query: 599 TAYSVHGTPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQD 658 T+YSVH PMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSG+TTLGGEGLQHQD Sbjct: 605 TSYSVHDLPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGKTTLGGEGLQHQD 664 Query: 659 GNSLVTAASIPNCVSYDPAYAYELAVILDEGMRRMMERGDDVFYYITVTNENEAQPSLPE 718 G+S + A++IPNC +YDPA+AYE+A I+DEGMR M+E+ DVFYY+TV NEN AQPS+P Sbjct: 665 GSSHLAASTIPNCRAYDPAFAYEVAAIVDEGMREMVEQQRDVFYYVTVMNENYAQPSVPG 724 Query: 719 G----VQEGILRGMYCL-GRKP-------GAQVRLLGSGPILKEAVAASALLQQHWQIEA 766 G ++EGIL+G+Y L R P AQV+LLG+G IL E +AA +L+ WQI+A Sbjct: 725 GDLQALREGILKGIYPLTARAPVQDQKSKQAQVQLLGAGAILGEVIAAQQILKGDWQIDA 784 Query: 767 EVWSVTSYTELARDGVAAQRAQRLSGSDGEPYVTAQLRDSAAPVIAVSDYIRTLPESIRA 826 VWSVTS+TEL RDG+AA+R RL + PYVT L S P+IA +DY+R +PE IRA Sbjct: 785 AVWSVTSFTELQRDGMAAERLARLGEASAAPYVTQALDASQGPIIAATDYVRAVPELIRA 844 Query: 827 FVPAPYVTLGTDGFGRSDTRVNLRDFFEIDARWIAYTAL 865 +VP YVTLGTDGFGRSDTR LR+FFE+D + I AL Sbjct: 845 YVPRRYVTLGTDGFGRSDTRQALREFFEVDRKSIVIAAL 883