BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0013.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777350.1| signal peptide protein [Herbaspirillum serop... 404 e-111 ref|YP_004751124.1| ABC transporter periplasmic-binding protein ... 236 2e-60 ref|YP_001101337.1| ABC transporter periplasmic substrate-bindin... 235 2e-60 ref|ZP_04577265.1| ABC transporter periplasmic substrate-binding... 226 2e-57 ref|ZP_08274229.1| Protein yhbN precursor [Oxalobacteraceae bact... 222 2e-56 ref|YP_001355040.1| OstA-like protein [Janthinobacterium sp. Mar... 219 3e-55 ref|ZP_04579398.1| ABC transporter periplasmic substrate-binding... 211 5e-53 emb|CBA32271.1| hypothetical protein Csp_D31300 [Curvibacter put... 145 2e-33 ref|ZP_08503108.1| Putative organic solvent tolerance protein [M... 144 6e-33 ref|YP_001856567.1| lipopolysaccharide transport periplasmic pro... 142 3e-32 >ref|YP_003777350.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ65442.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 201 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/197 (100%), Positives = 197/197 (100%) Query: 1 LLLPLLMLAALSGVARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAG 60 LLLPLLMLAALSGVARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAG Sbjct: 5 LLLPLLMLAALSGVARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAG 64 Query: 61 RVVLTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRA 120 RVVLTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRA Sbjct: 65 RVVLTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRA 124 Query: 121 HIQRMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPRNPPPAQPG 180 HIQRMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPRNPPPAQPG Sbjct: 125 HIQRMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPRNPPPAQPG 184 Query: 181 QPAQPATPQPTQPGKDQ 197 QPAQPATPQPTQPGKDQ Sbjct: 185 QPAQPATPQPTQPGKDQ 201 >ref|YP_004751124.1| ABC transporter periplasmic-binding protein [Collimonas fungivorans Ter331] gb|AEK60301.1| putative transport protein (ABC superfamily, peri_bind) [Collimonas fungivorans Ter331] Length = 211 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/163 (68%), Positives = 134/163 (82%) Query: 14 VARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAGRVVLTTDQYGYEN 73 +A AEKAD+ KPT I++DQ+ YDDV+QV TGNVV+TRGTL++KA RVV+TTD GY+ Sbjct: 48 LAHAEKADSEKPTLIDSDQLTYDDVKQVNVATGNVVLTRGTLLMKADRVVVTTDPSGYQF 107 Query: 74 AVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRAHIQRMDGKRITDE 133 A LYA PG LATF+QKRDGGPDLWI+G AERIEY +TE++KLF +A ++R+ G + TDE Sbjct: 108 ATLYADPGKLATFKQKRDGGPDLWIDGHAERIEYDGKTEITKLFSKAQMRRLQGDKPTDE 167 Query: 134 VNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPRNPPP 176 VNGEFISYDSR EFYSVNNT +G S+PGAGRI AVIQPR P Sbjct: 168 VNGEFISYDSRTEFYSVNNTVNGNSQPGAGRIRAVIQPRPKAP 210 >ref|YP_001101337.1| ABC transporter periplasmic substrate-binding protein [Herminiimonas arsenicoxydans] emb|CAL63216.1| Conserved hypothetical protein, putative organic solvent tolerance protein [Herminiimonas arsenicoxydans] Length = 185 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 104/158 (65%), Positives = 136/158 (86%) Query: 15 ARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAGRVVLTTDQYGYENA 74 A AEKAD +KPTN+EADQM YDDV+Q+ TF GNVV+TRG++++KA ++V+T D GY+ Sbjct: 20 AHAEKADASKPTNVEADQMQYDDVKQINTFIGNVVLTRGSILMKANKMVVTQDPAGYQFV 79 Query: 75 VLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRAHIQRMDGKRITDEV 134 V+YAAPG+LA+FRQKRDGGPD WI+GQAERIEY ++ E+ KLF +A ++R++ + TDEV Sbjct: 80 VMYAAPGTLASFRQKRDGGPDQWIDGQAERIEYDDKNEIMKLFSKARMRRLENGKTTDEV 139 Query: 135 NGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPR 172 NGE+ISYD+RAEF++V+NTASG SKPGAGRI A+IQPR Sbjct: 140 NGEYISYDTRAEFFTVHNTASGDSKPGAGRIKAIIQPR 177 >ref|ZP_04577265.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter formigenes HOxBLS] gb|EEO28227.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter formigenes HOxBLS] Length = 184 Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 104/171 (60%), Positives = 129/171 (75%) Query: 2 LLPLLMLAALSGVARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAGR 61 LL LL L+ A AE+AD KPTNIEADQM DDV+Q+ TFTGNVV+T+GTL+IKAG+ Sbjct: 8 LLALLFCIGLASNAAAERADANKPTNIEADQMTSDDVKQITTFTGNVVVTKGTLLIKAGK 67 Query: 62 VVLTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRAH 121 V+ D GY+ LYAAPG LA+ RQK+D GPD+WIEG E+IEY + EV+K F RA Sbjct: 68 AVIVEDPEGYQFITLYAAPGKLASLRQKQDAGPDIWIEGYGEKIEYDNKKEVAKFFTRAR 127 Query: 122 IQRMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPR 172 ++R+ G +ITD++ GEFISYD + E+YSV NT G SKPGAGR+ AVIQPR Sbjct: 128 VKRLQGTKITDDITGEFISYDGKTEYYSVYNTNEGVSKPGAGRVKAVIQPR 178 >ref|ZP_08274229.1| Protein yhbN precursor [Oxalobacteraceae bacterium IMCC9480] gb|EGF32297.1| Protein yhbN precursor [Oxalobacteraceae bacterium IMCC9480] Length = 184 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/172 (63%), Positives = 134/172 (77%), Gaps = 2/172 (1%) Query: 5 LLML-AALSGVARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAGRVV 63 LLM AA AEKAD+ KPT ++A+QM YDDV+QV TFTG+VV+ RGTL++KA RVV Sbjct: 9 LLMFNAAFVPAVHAEKADSNKPTVVDANQMAYDDVKQVNTFTGDVVVVRGTLLMKAARVV 68 Query: 64 LTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRAHIQ 123 + D GY+ A LYAAPGSLA+FRQKRDGG +LWIEG+AERIEY +TE+ KLF +A ++ Sbjct: 69 VVQDPAGYQFATLYAAPGSLASFRQKRDGGENLWIEGEAERIEYDGKTELVKLFSKAKMR 128 Query: 124 RMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQ-SKPGAGRITAVIQPRNP 174 R++G TDEV GEFISYDSR EF+SVNNT +GQ S+ G GRI A IQPR P Sbjct: 129 RLNGTTPTDEVEGEFISYDSRTEFFSVNNTPAGQDSEAGGGRIKATIQPRTP 180 >ref|YP_001355040.1| OstA-like protein [Janthinobacterium sp. Marseille] gb|ABR90386.1| OstA-like protein [Janthinobacterium sp. Marseille] Length = 184 Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 102/174 (58%), Positives = 135/174 (77%), Gaps = 2/174 (1%) Query: 1 LLLPLLMLAALSGV--ARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIK 58 L LL+L L + AEKAD TKPTN+EA++M YDD++Q+ TFTGNVV+TRGT+++K Sbjct: 4 FLSVLLVLCGLGTTVGSFAEKADATKPTNVEANKMEYDDIKQINTFTGNVVLTRGTILMK 63 Query: 59 AGRVVLTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQ 118 A ++V+ D GY+ LY + +LA F+QKRDGGPD WIEGQAERIEY ++ E+ KLF Sbjct: 64 ANKMVVKQDPAGYQFITLYGSADTLANFKQKRDGGPDQWIEGQAERIEYDDKAEIMKLFS 123 Query: 119 RAHIQRMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPR 172 +A ++R++ + TDEV GEFISYD+RAEF++V+NT+SG SK GAGRI AVIQPR Sbjct: 124 KARMRRLENGKPTDEVEGEFISYDTRAEFFTVHNTSSGDSKQGAGRIKAVIQPR 177 >ref|ZP_04579398.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter formigenes OXCC13] gb|EEO30371.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter formigenes OXCC13] Length = 184 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 98/171 (57%), Positives = 125/171 (73%) Query: 2 LLPLLMLAALSGVARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAGR 61 L L LS A AE+AD KPTNIEADQM DDV+QV TFTGNV++T+GTL+IKA + Sbjct: 9 FLILAFCIGLSFPALAERADANKPTNIEADQMTVDDVKQVTTFTGNVIVTKGTLLIKAAK 68 Query: 62 VVLTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRAH 121 V+ D GY+ LYAAPG LA+ RQK DGGP+LW+EG E+IEY + EV+K + A Sbjct: 69 AVIVQDPEGYQYVTLYAAPGKLASMRQKLDGGPNLWMEGYGEKIEYDNKHEVAKFYTHAR 128 Query: 122 IQRMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPR 172 ++RM+G +TD++ GEFI+YD ++E Y NNT+ G SKPGAGR+ AVIQPR Sbjct: 129 VKRMEGSVVTDDLMGEFIAYDGKSESYRANNTSQGVSKPGAGRVKAVIQPR 179 >emb|CBA32271.1| hypothetical protein Csp_D31300 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 219 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/194 (39%), Positives = 121/194 (62%), Gaps = 7/194 (3%) Query: 1 LLLPLLMLAALSGVA---RAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLII 57 +L L +L AL GVA RAEKAD KP N+E+D + YDD++QV F+GNVV+T+G+++I Sbjct: 22 ILFSLSVLLALCGVAEGIRAEKADRNKPMNVESDALRYDDLKQVSVFSGNVVLTKGSILI 81 Query: 58 KAGRVVLTTDQYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLF 117 + ++ + D GY+ ++ APG A FRQKRD G D +IEG+ + IEY + + + Sbjct: 82 RGAQIEVRQDPEGYQYGLVTGAPGKQAFFRQKRD-GLDEFIEGEGDTIEYDGKADTVRFI 140 Query: 118 QRAHIQRMDGKRITDEVNGEFISYDSRAEFYSVNNTASGQSKPGAGRITAVIQPRNPPPA 177 ++A ++R+ G + DEV G I Y++ + ++V+ T + P AGR+ A++ P+ P Sbjct: 141 KKAQMRRLRGATVADEVTGAVIVYENLTDRFTVDGTPKTAAAP-AGRVRAMLTPKADPVT 199 Query: 178 QPGQPAQPATPQPT 191 P PA A +PT Sbjct: 200 TP--PAAGAVLKPT 211 >ref|ZP_08503108.1| Putative organic solvent tolerance protein [Methyloversatilis universalis FAM5] gb|EGK73470.1| Putative organic solvent tolerance protein [Methyloversatilis universalis FAM5] Length = 185 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 74/162 (45%), Positives = 104/162 (64%), Gaps = 10/162 (6%) Query: 18 EKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAGRVVLTTDQYGYENAVLY 77 E+AD KP N+EAD++ DD + F GNVV T+GTL IKA +VV+T D GY+ V Sbjct: 28 ERADREKPVNLEADKVTVDDRTRTHVFEGNVVFTQGTLTIKANKVVVTQDATGYQKGVAT 87 Query: 78 AAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRAHIQRMDGKRITDEVNGE 137 G LA FRQKR+ G + W+EG+AERIE+ +TE+++ F R+H+ K DEV G+ Sbjct: 88 GGEGGLARFRQKRE-GINEWMEGEAERIEHDAKTEITRFFVRSHV-----KSGGDEVRGQ 141 Query: 138 FISYDSRAEFYSVNNTASGQSKPGAG----RITAVIQPRNPP 175 +I Y+S E Y+V N++ +S P AG R+ A+IQP+ P Sbjct: 142 YIEYNSLTENYTVTNSSDAKSVPSAGDQSKRVRAIIQPKTAP 183 >ref|YP_001856567.1| lipopolysaccharide transport periplasmic protein LptA [Burkholderia phymatum STM815] gb|ACC69521.1| lipopolysaccharide transport periplasmic protein LptA [Burkholderia phymatum STM815] Length = 225 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/191 (42%), Positives = 117/191 (61%), Gaps = 8/191 (4%) Query: 8 LAALSGVARAEKADTTKPTNIEADQMVYDDVRQVKTFTGNVVMTRGTLIIKAGRVVLTTD 67 A + +A AE+AD KP NIEAD M YDD++QV FTG+VV T+GT++I+A RV +T D Sbjct: 32 FAGFAPLAHAERADKDKPLNIEADNMTYDDLKQVNIFTGHVVATKGTILIRADRVEVTQD 91 Query: 68 QYGYENAVLYAAPGSLATFRQKRDGGPDLWIEGQAERIEYSEQTEVSKLFQRAHIQRMDG 127 GY+ A + +LA FRQKRD G + +I+G AERI+Y + +++ L RA ++R+ G Sbjct: 92 PQGYQYATGTSTGKNLAYFRQKRD-GVNEYIDGDAERIDYDGKQDLTTLTTRATVRRLQG 150 Query: 128 KR-ITDEVNGEFISYDSRAEFYSVNNTASGQSKPG--AGRITAVIQPRN---PPPAQPGQ 181 I DEV+G I+YD + +FY+ + PG GR+ A++ PRN P + P Sbjct: 151 TNTIMDEVHGSVITYDGQNDFYTA-KAGKDVASPGNPNGRVRAMLSPRNGGSQPLSGPSA 209 Query: 182 PAQPATPQPTQ 192 QPA P Q Sbjct: 210 TLQPANQFPAQ 220