BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0008.p (556 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777345.1| methyl-accepting chemotaxis I MCP-I serine c... 1105 0.0 ref|YP_315380.1| methyl-accepting chemotaxis sensory transducer ... 499 e-139 ref|YP_004695869.1| methyl-accepting chemotaxis sensory transduc... 454 e-125 ref|YP_001098440.1| methyl-accepting chemotaxis protein [Hermini... 451 e-124 ref|YP_004293384.1| methyl-accepting chemotaxis sensory transduc... 446 e-123 ref|YP_003334238.1| methyl-accepting chemotaxis sensory transduc... 441 e-121 ref|YP_001351770.1| methyl-accepting chemotaxis protein [Janthin... 435 e-119 ref|YP_003003794.1| methyl-accepting chemotaxis sensory transduc... 435 e-119 ref|YP_004695867.1| methyl-accepting chemotaxis sensory transduc... 430 e-118 ref|YP_001354516.1| methyl-accepting chemotaxis protein [Janthin... 425 e-116 >ref|YP_003777345.1| methyl-accepting chemotaxis I MCP-I serine chemoreceptor transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65437.1| methyl-accepting chemotaxis I MCP-I serine chemoreceptor transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 556 Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/556 (99%), Positives = 556/556 (100%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 +NKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL Sbjct: 1 MNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 Query: 61 ESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLER 120 ESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLER Sbjct: 61 ESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLER 120 Query: 121 LLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGRE 180 LLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGRE Sbjct: 121 LLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGRE 180 Query: 181 LYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSRQ 240 LYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSRQ Sbjct: 181 LYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSRQ 240 Query: 241 IEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQAG 300 IEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQAG Sbjct: 241 IEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQAG 300 Query: 301 SLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSSTR 360 SLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSSTR Sbjct: 301 SLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSSTR 360 Query: 361 IVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKDL 420 IVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKDL Sbjct: 361 IVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKDL 420 Query: 421 IDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVLM 480 IDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVLM Sbjct: 421 IDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVLM 480 Query: 481 DSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSAERLGAPPVAAQSSSGKS 540 DSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSAERLGAPPVAAQSSSGKS Sbjct: 481 DSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSAERLGAPPVAAQSSSGKS 540 Query: 541 SEAAERVPASGGLLAP 556 SEAAERVPASGGLLAP Sbjct: 541 SEAAERVPASGGLLAP 556 >ref|YP_315380.1| methyl-accepting chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] gb|AAZ97575.1| chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] Length = 572 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 286/541 (52%), Positives = 390/541 (72%), Gaps = 14/541 (2%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 L SIK RL+ I FL+I+L A G +GLVSL +TN ++++YEDR+V +LE+I + + Sbjct: 4 LANLSIKSRLVFVIGFLSILLTAIGGLGLVSLSATNGSLKTVYEDRVVGLGHLERINALM 63 Query: 61 ESARSGIYGIITLDSSEGW------DPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEE 114 ++ II ++ G D +D+R++ + N + ++ + +++ A++L+ EE Sbjct: 64 NGSQ-----IIVGEAVAGQLSAFPDDSAVVDQRVNDIKNTITEIDGIWKTFLASHLSSEE 118 Query: 115 STLLERLLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQ 174 L + RQ Y EGV+P + +L FQ A +I G MR+ + AV L Q Sbjct: 119 KALADAFSASRQKYGREGVVPVLAALSAHDFQQAGEILQGPMRETYPAVRANAEALIASQ 178 Query: 175 INVGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAG 234 + + + + Q R+ + +++ A+ AG+++A L LVRAI++PL QAV IA++VA Sbjct: 179 LKLAQSEFAAAQSRFVMVRNISVFAIVAGVLLAGLTGVWLVRAITRPLNQAVRIAESVAA 238 Query: 235 GDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSAR 294 GDL+++IEV+SQDETGQLMQALKDM L IV VR GT+TI +AS+EI SGN DLS+R Sbjct: 239 GDLTQKIEVQSQDETGQLMQALKDMNVSLADIVGQVRHGTDTIAVASREIASGNADLSSR 298 Query: 295 TEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSI 354 TE QA SLEETAS+M +LTSTV+QNA+NA QANQL S ++VAV+GGEVV QVVDTM SI Sbjct: 299 TESQASSLEETASSMEELTSTVRQNAENARQANQLVVSTADVAVKGGEVVGQVVDTMASI 358 Query: 355 NQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAA 414 SS +I DII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQR+A AA Sbjct: 359 KDSSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAGAA 418 Query: 415 REIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEID 474 +EIK LI+DSV KV GS LVD+AGKTM+E+V++V++VTD++ EI++ASQEQS GI++++ Sbjct: 419 KEIKSLIEDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVN 478 Query: 475 RAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSAER---LGAPPV 531 +A+ MD TQQNAALVE+AAAAA++L++QA KL+ A+S FRL GA++ R + AP V Sbjct: 479 QAVGQMDEMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFRLDGAYAQRREVPVSAPRV 538 Query: 532 A 532 A Sbjct: 539 A 539 >ref|YP_004695869.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] gb|AEJ02470.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] Length = 574 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 275/554 (49%), Positives = 378/554 (68%), Gaps = 18/554 (3%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 N +IK RLIL I L+++L+ G +G+ L+ TN+ R +YEDR V L I + Sbjct: 2 FNNMTIKSRLILVIGMLSVLLIGVGGLGIYGLNQTNDSFRGVYEDRAVPLGDLGLILDRM 61 Query: 61 ESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLER 120 + AR + + S+ G + + R + + + Y AT LTPEE+TL+E Sbjct: 62 QRAR-----LNAVMSAYGRNAEIVKERQAMTNQRDAEIAAAWQKYTATNLTPEEATLVEN 116 Query: 121 LLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMR--KQWDAVHQTLSDLKELQINVG 178 +Q + Y V P +++ + D + A+ ++DA H TL L ELQ + G Sbjct: 117 FNQQWKAY----VEPRNQTMVLAAAGDYDAAITNALSATPKFDAAHATLFKLLELQRDEG 172 Query: 179 RELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLS 238 + Y Q Y+ + + ++ + G+ A + +LL+RAI+ PL +A+ +A AVA GDL+ Sbjct: 173 AKEYAAAQNDYKNIFMTSVTVIALGIFFAAIIGFLLIRAITTPLNEAIAVANAVAAGDLT 232 Query: 239 RQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQ 298 +IEV S +ETG+L+QALK M L +V VR GT++IT AS EI SGNLDLS RTE+Q Sbjct: 233 SRIEVNSTNETGRLLQALKQMNDNLVDLVGKVRMGTDSITTASGEIASGNLDLSQRTEEQ 292 Query: 299 AGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSS 358 A SLEETAS+M +LTSTV+QNADNA QANQLAA ASEVAV+GG VV QVV TM+SIN+SS Sbjct: 293 ASSLEETASSMEELTSTVRQNADNARQANQLAAGASEVAVKGGAVVGQVVQTMSSINESS 352 Query: 359 TRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIK 418 +IVDII+VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQR+A+AA+EIK Sbjct: 353 KKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRTLAQRSAAAAKEIK 412 Query: 419 DLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIV 478 +LI DSV KV G+ LVD+AG TM+E+V+AV++VTD++ EIS+ASQEQS GI+++++A+ Sbjct: 413 ELISDSVSKVEDGTRLVDEAGATMDEIVSAVKRVTDIMAEISAASQEQSSGIEQVNQAVT 472 Query: 479 LMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL--GGAHSAERLGAPPVAAQSS 536 MD TQQNAALVE+AAAAA+++++QA+ L+ A+S F+L GG+H+ PV + Sbjct: 473 QMDEVTQQNAALVEEAAAAAESMQEQAQTLTQAVSTFKLSGGGSHT-----PTPVKRSNR 527 Query: 537 SGKSSEAAERVPAS 550 ++ R PA+ Sbjct: 528 PATVAKLPNRGPAT 541 >ref|YP_001098440.1| methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] emb|CAL60311.1| Methyl-accepting chemotaxis protein II [Herminiimonas arsenicoxydans] Length = 572 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 269/528 (50%), Positives = 368/528 (69%), Gaps = 16/528 (3%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 L +IK L+ + L+++L+A+GI+GL SL +TN+ +RS+YEDR V L + TL Sbjct: 2 LKNITIKSLLLFVMGILSLLLIATGILGLTSLDTTNKALRSVYEDRTVPIGQLNTV-ITL 60 Query: 61 ESAR-----SGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEES 115 + + IYG DP + ++D + + K + ++ A+ LTPE Sbjct: 61 STINQLDLAASIYG----------DPGLVIPKMDAIEKHSKEINQAFDAFMASTLTPEAK 110 Query: 116 TLLERLLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQI 175 L ++ R+ + ++ + PA+ + R + +I +G M + V ++ L +L++ Sbjct: 111 VLADKFAADRKIFLEKALQPAIAASRGGNVLRVTEIVNGPMEELITPVRAGVAALIDLEL 170 Query: 176 NVGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGG 235 ++ +E Q R+ + +++ A+ G+++A A+ L+R I++PL AV IA++VA G Sbjct: 171 REAKKAFEESQTRFVMVRNISIGAIIFGVLLAGFMAFWLIRLIARPLHDAVQIARSVAAG 230 Query: 236 DLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSART 295 DL++QI V S +ETGQL+QALKDM L + V+ VR+GTETIT+AS EI SGN DLS+RT Sbjct: 231 DLTQQIHVNSTNETGQLLQALKDMNDSLSKTVSAVRRGTETITVASGEIASGNADLSSRT 290 Query: 296 EQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSIN 355 E QAGSLEETAS+M +LTSTV+QNADNA QANQL SA+EVAV+GG VV +VV TM SI Sbjct: 291 EAQAGSLEETASSMEELTSTVRQNADNARQANQLVVSATEVAVKGGSVVSEVVITMGSIK 350 Query: 356 QSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAR 415 SS +IVDII VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQR+A AA+ Sbjct: 351 DSSRKIVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAGAAK 410 Query: 416 EIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDR 475 EIK LIDDSV KV GS LVDQAG TM+E+VT+V+ V D++ EI+SASQEQS GI+++++ Sbjct: 411 EIKALIDDSVHKVDAGSKLVDQAGSTMQEIVTSVKHVADIMSEITSASQEQSDGIEQVNQ 470 Query: 476 AIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSA 523 AI MD TQQNAALVEQAAAAAQ+++DQA +LS A++ F+L SA Sbjct: 471 AISQMDEMTQQNAALVEQAAAAAQSMQDQAVELSGAVAIFKLDAGGSA 518 >ref|YP_004293384.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. AL212] gb|ADZ25222.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. AL212] Length = 572 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 266/558 (47%), Positives = 367/558 (65%), Gaps = 26/558 (4%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 L +IK +L L I L+++L+ G +GL + +N+ ++++YEDR V L I + Sbjct: 2 LKNMTIKSKLALVIGMLSVLLVGVGALGLYGIDQSNDGLKTVYEDRTVVLGDLSLILDRM 61 Query: 61 ESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLER 120 R + + ++ D +R + + + + T LTPEE L Sbjct: 62 HRVR-----LNAVMAANIQDLTVAKQRAAMTTERDAEINATWQKFMGTILTPEEEKLANS 116 Query: 121 LLKQRQHYADEGVMPAVESLRKRS--------FQGADDIYSGAMRKQWDAVHQTLSDLKE 172 +Q P + R R+ F+ A D + ++D VHQT+ DL E Sbjct: 117 FTQQ---------WPIYKESRDRTMNLALAGNFEAAADNTTKDAAPKFDVVHQTMFDLIE 167 Query: 173 LQINVGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAV 232 LQ V + Y Q + + M +A+G G+++A++ LL+RAI PL +A+ +A AV Sbjct: 168 LQSKVAGQEYAEAQSNFNFVFTMTSIAIGLGVVLAIITGLLLIRAILGPLNEAIAVADAV 227 Query: 233 AGGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLS 292 A GDL+ +IEV S +ETG L+QALK M + L +V+ VR GT+ I AS EI SGN DLS Sbjct: 228 ASGDLTSRIEVNSTNETGHLLQALKTMNENLIDLVSRVRAGTDQIATASGEIASGNSDLS 287 Query: 293 ARTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMT 352 RTE+QA SLEETAS+M +LTSTVKQNADNA QANQLAA ASEVAV+GG VV QVV TM+ Sbjct: 288 QRTEEQASSLEETASSMEELTSTVKQNADNARQANQLAAGASEVAVKGGAVVGQVVQTMS 347 Query: 353 SINQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAAS 412 +IN+SS +IVDII+VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQR+A+ Sbjct: 348 AINESSKKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRTLAQRSAA 407 Query: 413 AAREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQE 472 AA+EIK+LI DSV KV G+ LVD+AG TM+E+VT+V++VTD++ EIS+AS EQS GI++ Sbjct: 408 AAKEIKELISDSVAKVEDGTRLVDEAGATMDEIVTSVKRVTDIMSEISAASNEQSSGIEQ 467 Query: 473 IDRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL-GGAHSAERLGAPPV 531 +++A+ MD TQQNAALVE+AAAAA+++ DQA+ L+ A+S F++ GGA A+ + P+ Sbjct: 468 VNQAVTQMDEVTQQNAALVEEAAAAAESMNDQAQALTQAVSVFKVSGGAGHAQGV---PI 524 Query: 532 AAQSSSGKSSEAAERVPA 549 + + ++ R PA Sbjct: 525 KRSNRTASIAKLPNRGPA 542 >ref|YP_003334238.1| methyl-accepting chemotaxis sensory transducer [Dickeya dadantii Ech586] gb|ACZ77533.1| methyl-accepting chemotaxis sensory transducer [Dickeya dadantii Ech586] Length = 524 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 257/534 (48%), Positives = 350/534 (65%), Gaps = 12/534 (2%) Query: 16 FLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTLESARSGIYGIITLDS 75 L++ +L G +G+ + N+ ++++YEDR V A LE++E ++ R I+ +D Sbjct: 1 MLSLGILIMGAIGMFTAEKANQSLKTVYEDRTVVLAQLEKMEWLMQRNR-----ILLMDM 55 Query: 76 SEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLERLLKQRQHYADEGVMP 135 D +R++ L N ++ V R Y+ATYLTP+E+ L ++ Q Y EG+ P Sbjct: 56 LLLPDATNKQQRVEELNQNTTRIDQVWREYRATYLTPDETRLADQFAGNLQRYNREGIQP 115 Query: 136 AVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGRELYEHEQQRYRQLILM 195 ++R + A +Y + H LS L LQ++V +E Y QRY+ L + Sbjct: 116 TDSAIRAGQMEQAMRLYDSKVSPLEKQSHAILSQLVTLQVDVAKEEYTDSVQRYQWLKTL 175 Query: 196 ALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSRQIEVRSQDETGQLMQA 255 A+LA+ AG+ AV+ WL+VR I + L QA A+AVA GDL+ I VR +DE ++ Sbjct: 176 AILAVLAGISGAVVFGWLMVRGIVRSLLQAQSAAEAVANGDLTYPITVRGRDEITVVLNT 235 Query: 256 LKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQAGSLEETASAMAQLTST 315 L M + L +IV VR G E++ MAS EI GN DLSARTE QA +LE+TA++M QL++T Sbjct: 236 LSHMQESLGRIVTQVRHGAESVRMASGEIAHGNHDLSARTESQASALEQTAASMEQLSAT 295 Query: 316 VKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSSTRIVDIIAVIDGIAFQT 375 VKQNADNA QANQLA +AS+VA +GG VV +VVDTM IN S+ RI DII+VIDGIAFQT Sbjct: 296 VKQNADNARQANQLAQTASQVAEQGGSVVTEVVDTMREINDSAQRIADIISVIDGIAFQT 355 Query: 376 NILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKDLIDDSVEKVGKGSALV 435 NILALNAAVEAARAGEQGRGF+VVA EVR+LAQR+A +AREIK LI SVE++ GS L Sbjct: 356 NILALNAAVEAARAGEQGRGFSVVAGEVRALAQRSAESAREIKALISSSVERIESGSTLA 415 Query: 436 DQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVLMDSSTQQNAALVEQAA 495 D+AG TM +VV ++R+VTD++GEISSAS EQS G+ +I A+V M+ +TQQNAALVE+ A Sbjct: 416 DKAGSTMHDVVNSIRRVTDIMGEISSASHEQSSGVSQIGEAVVSMERTTQQNAALVEEMA 475 Query: 496 AAAQALEDQAEKLSLAMSAFRLGGAHSAERLGAPPVAAQSSSGKSSEAAERVPA 549 AAA +L QAE+L A+ FRL +ER AP V + S + + +P+ Sbjct: 476 AAAGSLSGQAEELVQAVGVFRL-----SER--APGVVPDTRSAEQATEQAWLPS 522 >ref|YP_001351770.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89920.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 568 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 267/523 (51%), Positives = 366/523 (69%), Gaps = 14/523 (2%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 L +IK L+ +S L+++L+ +GI+GL SL +TN+ ++++YEDR VA L + + L Sbjct: 2 LKNLTIKSLLLSVMSILSVLLVGTGILGLSSLSATNDALKTVYEDRTVALGELNTVITLL 61 Query: 61 ESAR----SGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEEST 116 + + IYG DPN + ++D + KT+ +Y+ T LT EE Sbjct: 62 TINQLDLAASIYG----------DPNLVLPKMDAIEKRTKTIASTFGAYEQTQLTTEEKA 111 Query: 117 LLERLLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQIN 176 L + + + D+ ++PA+ + R + +I + M V ++ L ++Q+ Sbjct: 112 LAGKFSADYKKFVDKALVPAIAASRGGNVLRVTEIVNETMEGLILPVRADVTSLIDIQLQ 171 Query: 177 VGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGD 236 + +E Q R+ + +++ A+ G+++A A+ L+R I +PL +AV +A++VA GD Sbjct: 172 EAKREFEASQARFTLVRNISIAAIIFGVLIAAFMAFWLLRLIVRPLREAVDVARSVAAGD 231 Query: 237 LSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTE 296 L++QI+VRS +ETGQL+QA+KDM L Q V+ VR GTETIT+AS EI SGN DLS+RTE Sbjct: 232 LTQQIQVRSSNETGQLLQAIKDMNDSLAQTVSAVRHGTETITLASGEIASGNADLSSRTE 291 Query: 297 QQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQ 356 QAGSLEETAS+M +LTSTV+QNADNA QANQLAASASEVAV+GG VV +VV TM SI Sbjct: 292 AQAGSLEETASSMEELTSTVRQNADNARQANQLAASASEVAVKGGVVVAEVVQTMGSIQD 351 Query: 357 SSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAARE 416 SS +IVDII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQR+A+AA+E Sbjct: 352 SSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRNLAQRSAAAAKE 411 Query: 417 IKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRA 476 IK LI DSV+KV GS V QAGKTM+E+V++VR+VTD++ EI++ASQEQ+ GI++I++A Sbjct: 412 IKVLIGDSVDKVEAGSNQVTQAGKTMDEIVSSVRRVTDIMAEITAASQEQTSGIEQINQA 471 Query: 477 IVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGG 519 I MD TQQNAALVEQAAAAA +L+ QA LS + F+L G Sbjct: 472 ITQMDEMTQQNAALVEQAAAAAASLQQQANGLSQVVGVFKLSG 514 >ref|YP_003003794.1| methyl-accepting chemotaxis sensory transducer [Dickeya zeae Ech1591] gb|ACT06315.1| methyl-accepting chemotaxis sensory transducer [Dickeya zeae Ech1591] Length = 532 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 261/527 (49%), Positives = 344/527 (65%), Gaps = 15/527 (2%) Query: 4 FSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTLESA 63 I RL L++ +L G +GL + N+ ++++YEDR V A LE++E ++ Sbjct: 1 MKISTRLWSFTGMLSLGILIMGAIGLFTAEKANQSLKTVYEDRTVVLAQLEKLEWLVQRN 60 Query: 64 RSGIYGIITLDSSEGWDPNEIDRR--LDLLVNNLKTVEPVIRSYQATYLTPEESTLLERL 121 R I ++ L PN ++++ D L N+ + V Y+ATYLTPEE+ L ++L Sbjct: 61 RVLIMDMLLL-------PNTLNKQQSTDELNQNMSHIGQVWAEYRATYLTPEETRLADQL 113 Query: 122 LKQRQHYADEGVMPAVESLRKRSFQGADDIYS---GAMRKQWDAVHQTLSDLKELQINVG 178 + Q Y EGV P ++R A +Y A+ KQ H LS L LQ+ V Sbjct: 114 AENLQRYNREGVQPTDAAIRAGQTDMALRLYDDKVSALEKQG---HALLSQLVALQVEVA 170 Query: 179 RELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLS 238 R+ Y QRY+ L +A+LA+ AG+ AV+ WL+VR I + L+QA A AVA GDL+ Sbjct: 171 RDEYTSSVQRYQWLKTLAILAVLAGIGGAVVFGWLMVRGIVRSLSQAQAAAAAVANGDLT 230 Query: 239 RQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQ 298 I +DE ++ L M + L +V VR G E++ MAS EI GN DLSARTE Q Sbjct: 231 YPINASGRDEITTVLNTLSHMQESLGSMVTQVRHGAESVRMASGEIAHGNHDLSARTESQ 290 Query: 299 AGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSS 358 A +LE+TA++M QL++TVKQNADNA QANQLA +AS+VA +GG VV QVVDTM IN S+ Sbjct: 291 ASALEQTAASMEQLSATVKQNADNARQANQLAQTASQVAEQGGSVVTQVVDTMRDINDSA 350 Query: 359 TRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIK 418 RI DII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQR+A +AREIK Sbjct: 351 QRIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSAESAREIK 410 Query: 419 DLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIV 478 LI +SVE++ GSAL D AG TM++VV ++R+VTD++GEISSAS EQS G+ +I A+V Sbjct: 411 TLISNSVERIESGSALADNAGHTMQDVVNSIRRVTDIMGEISSASHEQSSGVSQIGEAVV 470 Query: 479 LMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSAER 525 M+ +TQQNAALVE+ AAAA +L Q+E+L A+ FRL S R Sbjct: 471 SMERTTQQNAALVEEMAAAAGSLSSQSEELVQAVGVFRLSDRASGAR 517 >ref|YP_004695867.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] ref|YP_004695874.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] gb|AEJ02468.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] gb|AEJ02475.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] Length = 575 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 269/563 (47%), Positives = 379/563 (67%), Gaps = 35/563 (6%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 N +IK RL+ IS L+++L+ G +GL ++ +N ++S+YEDR V L +I Sbjct: 2 FNNMTIKSRLMFVISMLSLLLVGIGSLGLYGINQSNAGLKSVYEDRTVPAVQLGKILD-- 59 Query: 61 ESARSGIYGIITLDSSEGWDPNEID---RRLDLLVNNLKTVEPVIRSYQATYLTPEESTL 117 ++ ++ +++E +D R + + +K E V + AT LT EE+ L Sbjct: 60 ------VWHLVRRNATEAAQAKNVDVAKARGEEALKLVKQNEAVWAQFMATKLTTEEAAL 113 Query: 118 LERLLKQRQHYADEGVMPAVESLRKR-------SFQGAD-DIYSGAMRKQWDAVHQTLSD 169 + +Q Y VESL + F+ A + + AM+K ++A+ T+ Sbjct: 114 AKTKGEQHVQY--------VESLNRTLQLASAGEFEAAALNASTDAMQK-FNALRDTVFA 164 Query: 170 LKELQINVGRELYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIA 229 L +LQ + Y Q Y + + +++ M G+ +A++ +LL+RAI PL +A+ +A Sbjct: 165 LLDLQGTAAAQEYATAQNHYENIFMTSVVVMILGVSLAIIVGFLLIRAIVGPLNEAIAVA 224 Query: 230 QAVAGGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNL 289 AVA GDL+ +IE S +ETG+L+QAL+ M L +V VR GT++IT AS EI SGNL Sbjct: 225 NAVAAGDLTSRIEANSTNETGRLLQALRTMNDNLADLVGKVRMGTDSITTASGEIASGNL 284 Query: 290 DLSARTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVD 349 DLS RTE+QA SLEETAS+M +LTSTV+QNADNA QANQLAA ASEVAV+GG VV QVV Sbjct: 285 DLSQRTEEQASSLEETASSMEELTSTVRQNADNARQANQLAAGASEVAVKGGAVVGQVVQ 344 Query: 350 TMTSINQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQR 409 TM+SIN+SS +IVDII+VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQR Sbjct: 345 TMSSINESSKKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRTLAQR 404 Query: 410 AASAAREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQG 469 +A+AA+EIK+LI DSV KV G+ LVD+AG TM+E+V+AV++VTD++ EIS+ASQEQS G Sbjct: 405 SAAAAKEIKELISDSVSKVEDGTRLVDEAGATMDEIVSAVKRVTDIMAEISAASQEQSSG 464 Query: 470 IQEIDRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRL--GGAHSAERLG 527 I+++++A+ MD TQQNAALVE+AAAAA+++++QA+ L+ A+S F+L GG+H+ Sbjct: 465 IEQVNQAVTQMDEVTQQNAALVEEAAAAAESMQEQAQTLTQAVSTFKLSGGGSHT----- 519 Query: 528 APPVAAQSSSGKSSEAAERVPAS 550 PV + ++ R PA+ Sbjct: 520 PTPVKRSNRPATVAKLPNRGPAT 542 >ref|YP_001354516.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89935.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 567 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 265/551 (48%), Positives = 364/551 (66%), Gaps = 7/551 (1%) Query: 1 LNKFSIKIRLILAISFLTIMLLASGIVGLVSLHSTNEKMRSLYEDRLVAYAYLEQIESTL 60 N SIK+RLI ++F+ IML+ G +G+ L STN ++ +Y ++L + + + L Sbjct: 2 FNNLSIKMRLIGTMAFMGIMLIVGGAMGVFGLQSTNNSLQDVYGNQLASSQAINTAITRL 61 Query: 61 ESARSGIYGIITLDSSEGWDPNEIDRRLDLLVNNLKTVEPVIRSYQATYLTPEESTLLER 120 ARS I + L S G EI R D L N + + Y A + +E L + Sbjct: 62 FQARSTIDRV--LIKSSGSKNAEIFARADTLRNE---SDAAWKQYYALPMNADEKKLADE 116 Query: 121 LLKQRQHYADEGVMPAVESLRKRSFQGADDIYSGAMRKQWDAVHQTLSDLKELQINVGRE 180 + R Y EG +P +++++ F+ A+ + + + Q+ L+E Q+ Sbjct: 117 VTANRDTYLREGALPLIKAIQAGLFEEAELLMLEKATPLFIKMTQSAEKLQEFQMKAAAA 176 Query: 181 LYEHEQQRYRQLILMALLAMGAGLIVAVLEAWLLVRAISQPLTQAVGIAQAVAGGDLSRQ 240 YE Q + + A+ + GL+V + A+ L+RAI QPL + + A++ GDL+ + Sbjct: 177 SYESSQSMFSLFRIAAIGGVLFGLLVVAIAAFFLIRAIMQPLGEMLNHFSAISAGDLTSR 236 Query: 241 IEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSGNLDLSARTEQQAG 300 IEV+S++E G+LM L+ M + L + V VRQG+ I +A+++I +GNLDLS+RTEQQA Sbjct: 237 IEVKSRNEMGKLMGGLQVMQKSLIETVFNVRQGSTAIGVATQQIAAGNLDLSSRTEQQAS 296 Query: 301 SLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQVVDTMTSINQSSTR 360 SLEETAS+M +LTSTVKQNADNA QANQLAASAS VA +GG VV QVVDTM IN S+ + Sbjct: 297 SLEETASSMEELTSTVKQNADNARQANQLAASASTVAEKGGVVVSQVVDTMEEINTSAKK 356 Query: 361 IVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRAASAAREIKDL 420 IVDII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQR+A+AA+EIK L Sbjct: 357 IVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKTL 416 Query: 421 IDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQSQGIQEIDRAIVLM 480 I DSV+KV GS LV +AG TM+EVV V++VTD++ EI++ASQEQS GI+++++AI M Sbjct: 417 IGDSVDKVEIGSKLVAEAGVTMKEVVHGVQQVTDIMSEITAASQEQSAGIEQVNQAISQM 476 Query: 481 DSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSAE--RLGAPPVAAQSSSG 538 D TQQNAALVE+AAAAA++L +QA KL+ A+S F+L G +A + A +AA +SS Sbjct: 477 DQVTQQNAALVEEAAAAAESLNEQAGKLAEAVSVFKLDGVAAAAPVKKTASKIAAVASSP 536 Query: 539 KSSEAAERVPA 549 + A PA Sbjct: 537 APVKRAIAAPA 547