BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0001.p (407 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004418007.1| integrase family protein [Pusillimonas sp. T... 351 1e-94 ref|YP_001666764.1| integrase family protein [Pseudomonas putida... 333 4e-89 gb|AEO73190.1| Uncharacterized protein conserved in bacteria [Ps... 331 1e-88 ref|YP_004684266.1| integrase [Cupriavidus necator N-1] >gi|3381... 328 1e-87 ref|ZP_05292858.1| hypothetical protein ACA_1911 [Acidithiobacil... 326 4e-87 ref|ZP_03699648.1| integrase family protein [Lutiella nitroferru... 325 1e-86 ref|ZP_07044295.1| integrase family protein [Comamonas testoster... 293 4e-77 ref|YP_004487192.1| integrase family protein [Delftia sp. Cs1-4]... 212 1e-52 ref|YP_001280023.1| hypothetical protein PsycPRwf_1124 [Psychrob... 199 7e-49 ref|YP_390600.1| putative integrase [Thiomicrospira crunogena XC... 195 1e-47 >ref|YP_004418007.1| integrase family protein [Pusillimonas sp. T7-7] gb|AEC21383.1| integrase family protein [Pusillimonas sp. T7-7] Length = 669 Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 180/387 (46%), Positives = 257/387 (66%), Gaps = 5/387 (1%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 M +I+F+PR ELDA N FI R+ L+VFG DLDFD WD TE+L IK G KR Sbjct: 1 MAEIIVFQPRPELDAAQNMRGFITSCRDLLTVFGTDLDFDALVWDVTEYLEIKGRGKKRH 60 Query: 61 RIVFDSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEGR 120 R++F + E + P + F F+K+YIRYM G+RPTK +A RLAALRA+ SAL E Sbjct: 61 RLIFSTLETMEQSDPQPFSEPFLSFSKSYIRYMHGVRPTKNIAFRLAALRALHSALNESS 120 Query: 121 RSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFIH 180 S +P + P NRA Q+++ERY TTAYR++ QL A+F+S + LT F+WR+ + Sbjct: 121 -SCNPVHLKPIHFNRAGQMISERYKMTTAYRIAGQLEMAADFLSENTLTSVRFSWRNSLP 179 Query: 181 RPRDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCASPDRISE 240 RP D +R+GKEF+ +R +K+P++ ++DAL +IF A +P D+L S +AA+LCA+PDR++E Sbjct: 180 RPGDAVRIGKEFEVKRLQKIPSQEALDALPKIFRMALSPPDVLFSSVAAILCAAPDRVNE 239 Query: 241 VLSLPADCE-FEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITNS 299 VLSL DCE +E+ + +VYGLRW SK + KW+IPSM SVV++A+ +IR++T+ Sbjct: 240 VLSLAHDCEVWEKGTGDDDLVYGLRWSGSKGTGEITKWLIPSMASVVQEAIEKIRRVTSE 299 Query: 300 ARIISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLLRL--APRGHISFCRHHKIPYT 357 AR I+ WYE P LYLP +E+LR+ K LS E+ D++ L A +C+++K+ Sbjct: 300 ARTIAIWYEENPHGLYLPDEMEYLRN-KDLSMLEVADIIGLSGAESSSRQWCKNNKVSLI 358 Query: 358 GRGLTWKVRFSDLEDSLLSRLPAEFPF 384 G + RFSD+E ++L LPA FP+ Sbjct: 359 SMGTGYVARFSDVERAILRYLPASFPY 385 >ref|YP_001666764.1| integrase family protein [Pseudomonas putida GB-1] gb|ABY96428.1| integrase family protein [Pseudomonas putida GB-1] Length = 689 Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 170/387 (43%), Positives = 248/387 (64%), Gaps = 10/387 (2%) Query: 4 LILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQRIV 63 + +F P+ E+DA AN F+ M R+QL++FG DL FD WD T+ +K HG KR R+ Sbjct: 5 IAVFTPKAEIDASANLAAFVTMCRSQLTIFGADLRFDDMAWDVTDTTQLKGHGKKRVRVY 64 Query: 64 FDSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEGRRSA 123 F + ++ + + F FAKAY+RYMQG+RPTK A R+ ALRA+++AL R+S Sbjct: 65 FSTQETVDDILPTQMAEPFVSFAKAYVRYMQGMRPTKNPAFRVTALRALDAAL---RQSG 121 Query: 124 D--PSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFIHR 181 P + NRA + +AER S +TAYRV QL A F+S ++LT +WRS I R Sbjct: 122 HLVPVMMDGDTFNRAARAIAERLSGSTAYRVGSQLELIAKFMSENRLTAVPLSWRSAIKR 181 Query: 182 PRDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCASPDRISEV 241 P D +RVG+EFD+RR +K+P++A+++AL + F A P+D+L S IAA+LC++PDRI+EV Sbjct: 182 PLDTVRVGQEFDKRRTEKMPSQAALEALPKTFQIATQPKDVLFSSIAAILCSAPDRINEV 241 Query: 242 LSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITNSAR 301 L L CE K GK YGLRW+P+K A PM+KW+IPSM VV +A+++IR++T AR Sbjct: 242 LLLAESCEVHDKTSGGKDAYGLRWQPAKGADPMVKWIIPSMAPVVAEAIAKIRRLTEDAR 301 Query: 302 IISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLLRLAPRGHISF----CRHHKIPYT 357 I++WYE P+ LYLP LEHLR ++ L+ +E++ ++ L +G SF C + + Sbjct: 302 RIAQWYEFNPERLYLPHDLEHLRRQELLTMDEVQQVI-LLEKGSASFASQWCTANNVLLI 360 Query: 358 GRGLTWKVRFSDLEDSLLSRLPAEFPF 384 RF+D+E + + +LP+ FP Sbjct: 361 KNDSGVCARFADVEKAAILQLPSGFPL 387 >gb|AEO73190.1| Uncharacterized protein conserved in bacteria [Pseudomonas aeruginosa M18] Length = 691 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 170/386 (44%), Positives = 249/386 (64%), Gaps = 8/386 (2%) Query: 4 LILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQRIV 63 L++F PR E DA N +FI M+R+QL++FG L F+ TWD T+ +K HG R RI Sbjct: 17 LVVFTPRAERDAAENLGEFIAMSRSQLTIFGAGLRFNDMTWDVTDTTQLKAHGKNRIRIC 76 Query: 64 FDSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEGRRSA 123 F + ++ + + F FAKAY+RYMQG+RPTK A R+ ALRA+++A R+S Sbjct: 77 FSTQETVDDTLPTQMAEPFVSFAKAYVRYMQGMRPTKNPAFRVTALRALDAAF---RKSG 133 Query: 124 D--PSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFIHR 181 P + NRA +++AER S +TAYRV QL A F+S H+LT +WRS I+R Sbjct: 134 HLIPVMMDGDTFNRAARIIAERLSGSTAYRVGSQLELIARFMSEHRLTAIPLSWRSPINR 193 Query: 182 PRDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCASPDRISEV 241 P D +RVG+EFD+RR +K+P++A+++AL + F A P D++ S IAA+LC++PDRI+EV Sbjct: 194 PLDTVRVGQEFDKRRNEKMPSQAALEALPKTFYMATQPNDVMFSSIAAILCSAPDRINEV 253 Query: 242 LSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITNSAR 301 L L +CE +K GK YGLRW P+K A PM+KW+IPSM VV +A+++IR++T AR Sbjct: 254 LLLTENCEVYEKTSGGKDAYGLRWHPAKGADPMVKWIIPSMALVVAEAVAKIRRLTEGAR 313 Query: 302 IISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLLRL---APRGHISFCRHHKIPYTG 358 I++WYE P+ LYLP LE+LR ++ L+ +E++ ++ L AP +C + + Sbjct: 314 RIAQWYELNPEKLYLPQHLEYLRSQELLTMDEVQQVILLDEGAPSFARLWCTANDVLLIK 373 Query: 359 RGLTWKVRFSDLEDSLLSRLPAEFPF 384 G RF+D+E + ++ LPA FP Sbjct: 374 IGRRVCARFADVERAAIALLPAGFPL 399 >ref|YP_004684266.1| integrase [Cupriavidus necator N-1] gb|AEI75785.1| integrase [Cupriavidus necator N-1] Length = 692 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 172/404 (42%), Positives = 242/404 (59%), Gaps = 5/404 (1%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 M ++LF P+ E DA N DF+ M R QL+VFG DL FD + WD T+ + +K G KR Sbjct: 1 MADIVLFTPKSEWDASENLNDFVAMCREQLTVFGADLCFDENVWDITDAIELKGRGNKRF 60 Query: 61 RIVFDSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEGR 120 R+VF + + P+ + F FAKA RY +RPTK +R+ ALRA+E AL E Sbjct: 61 RVVFSNLSTANDATVRPMAEPFLSFAKADFRYSFAMRPTKSPDRRMVALRALEEALAENG 120 Query: 121 RSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFIH 180 DP ++ NRA QL+ ER+S ++AYRV QL + F+S + L WR+ + Sbjct: 121 NYPDPVRMTAETFNRAAQLVKERFSMSSAYRVGGQLELLSKFLSDNHLVAVRIDWRNPLR 180 Query: 181 RPRDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCASPDRISE 240 RP D RVGKEFDERR KKLP+ A+++A+ +IF A P + S IAA LC++PDRI+E Sbjct: 181 RPTDTSRVGKEFDERRNKKLPSAAALEAIPKIFQTATEPSIVFASAIAATLCSAPDRINE 240 Query: 241 VLSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITNSA 300 +L LPA+CE +K +G YGLRW +K A PM+KWV+PSM VV +A+ RIR ++ +A Sbjct: 241 ILLLPANCEVREKKGDGTEAYGLRWWSAKGAEPMVKWVVPSMAEVVSEAIRRIRDLSANA 300 Query: 301 RIISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLL---RLAPR-GHISFCRHHKIPY 356 R ++ WYE +P+ YL EHLR +++LS+ EL +L PR +C+ K+ Sbjct: 301 RKVAVWYEEHPNEAYLSEAAEHLRHQEWLSASELNLVLFGDETVPRQSGTQWCKLKKVTL 360 Query: 357 TGRGLTWKVRFSDLEDSLLSRLPAEFPFXAIKSSYHSR-AICTV 399 RG +F+D+E +LL LP FP+ + R A+C V Sbjct: 361 IKRGRASYAKFADVEAALLELLPKGFPWLSKSVGLKYRDALCIV 404 >ref|ZP_05292858.1| hypothetical protein ACA_1911 [Acidithiobacillus caldus ATCC 51756] gb|EET27300.1| hypothetical protein ACA_1911 [Acidithiobacillus caldus ATCC 51756] Length = 390 Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 166/356 (46%), Positives = 232/356 (65%), Gaps = 3/356 (0%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 MT ++LF P+ ELDA AN F+D+ R++L+VFG DL F D WD TE + K G+KR+ Sbjct: 1 MTEIVLFTPKAELDAAANLRGFVDICRSKLTVFGADLPFQNDVWDVTEAVVTKGKGSKRE 60 Query: 61 RIVF-DSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEG 119 RI F ++ VDE + + + F FAKAY+RYM G+RPTK + R+AALRAIE+ALLE Sbjct: 61 RITFSNAATVDEKAPEM-MREPFLSFAKAYLRYMHGMRPTKSIHNRVAALRAIEAALLEN 119 Query: 120 RRSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFI 179 DP +I +LNRA Q++++R+ AYRV Q+ F++ ++LT W + I Sbjct: 120 NAHPDPVQIDSRVLNRAAQIVSDRFGDGAAYRVGGQIEMIGTFLAENRLTSVPVRWHNPI 179 Query: 180 HRPRDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCASPDRIS 239 RP +RVGKEFDERR +K+P+ A++DAL RIF A P D++ + +AA+L ASP RIS Sbjct: 180 KRPSSAVRVGKEFDERRAEKMPSSAALDALPRIFRIATEPADVITASVAAILLASPARIS 239 Query: 240 EVLSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITNS 299 EVL+LP CE + + YGLRW P+K A PM+KW++PSM SVV+ AL +IR T+ Sbjct: 240 EVLTLPEACEVREPRKGKEDAYGLRWWPAKGAEPMVKWLVPSMASVVEDALQKIRVATDE 299 Query: 300 ARIISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLLRLAPRGHIS-FCRHHKI 354 AR I++WYE+ +YL P + HL R++LS E+ ++L RG S +CR I Sbjct: 300 ARRIAKWYEKNAGQIYLSPDVSHLGGREWLSMAEVAEVLGFTDRGAASAWCRAKAI 355 >ref|ZP_03699648.1| integrase family protein [Lutiella nitroferrum 2002] gb|EEG07330.1| integrase family protein [Lutiella nitroferrum 2002] Length = 683 Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 180/403 (44%), Positives = 247/403 (61%), Gaps = 9/403 (2%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 M ++LF P+ ELDA N FI M R +L+VFG DL FD WD T+ K G KR+ Sbjct: 1 MNEVLLFTPKQELDALDNLEGFITMCRERLTVFGADLAFDAHIWDVTKECARKGQGTKRE 60 Query: 61 RIVFDSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEGR 120 RI F + P+ FR FA+AYIRYMQG+RP + R+AALRA+E+AL E Sbjct: 61 RITFCTLTTAGTKCPEPMSSAFRSFAQAYIRYMQGMRPVVGLGFRMAALRALEAALTENG 120 Query: 121 RSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFIH 180 P K I NRA QLL R+S+ AYR+ QL A+F++ ++LT W + I Sbjct: 121 AERSPVKADTGIFNRAAQLLHARFSEGAAYRIGIQLQMVADFLATNRLTVVPLRWHNSIK 180 Query: 181 RPRDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCASPDRISE 240 RP G RVGKEFDE+R KLP+ +++ L ++F A P DIL+S IAA+LC++PDRI+E Sbjct: 181 RPAGGTRVGKEFDEQRASKLPSPRALEVLPKVFRLAVAPADILVSSIAAILCSAPDRINE 240 Query: 241 VLSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITNSA 300 VL+LP DCE N YG+RW P+K+A PM+KWVIPSM+SVV++AL +IRK T++A Sbjct: 241 VLTLPVDCEV-----NLAGAYGIRWWPAKEADPMVKWVIPSMSSVVQEALGKIRKETDAA 295 Query: 301 RIISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLL---RLAPRGHISFCRHHKIPYT 357 R ++ WYE P +YLP LE LRD + LS +E+ +L + A ++C+ + IP Sbjct: 296 RKVASWYEANPTRMYLPANLERLRDHELLSMQEVGKVLWGRKFANGSPHTWCKENSIPLE 355 Query: 358 GRGLTWKVRFSDLEDSLLSRLPAEFPFXAI-KSSYHSRAICTV 399 +G W F+ +E +L+ LP+ FP K +S A+C V Sbjct: 356 KQGRIWFAPFAQVESVVLAMLPSNFPLLEPDKKLKYSEALCVV 398 >ref|ZP_07044295.1| integrase family protein [Comamonas testosteroni S44] gb|EFI62045.1| integrase family protein [Comamonas testosteroni S44] Length = 684 Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 161/404 (39%), Positives = 235/404 (58%), Gaps = 8/404 (1%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 M+ L+LF+PR EL AE N F+ M R++L+ G DL FD WD T + +K Sbjct: 1 MSNLVLFKPRRELSAEKNLAAFVAMCRDELTALGADLPFDEMKWDVTNHIKLKGKNGAL- 59 Query: 61 RIVFDSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEGR 120 R VF +W ++ P+ + + FAK+Y RY PTK + RLAA RA+ +AL E Sbjct: 60 RAVFSTWESADDSEPAPMAEPYAAFAKSYFRYQHAFCPTKSIGSRLAATRALGAALAE-Y 118 Query: 121 RSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFIH 180 S D + + +LNRA QL+A Y + TAYR QQL A+FI ++L W + I Sbjct: 119 GSHDITLVHGQVLNRAAQLIAVHYGKDTAYRTGQQLEMLASFIDNNRLASVPLRWVNPIE 178 Query: 181 RP-RDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCASPDRIS 239 RP + RVG+EF+ RR++ LP+ ++DAL R F A D++++ +AA++C++PDR++ Sbjct: 179 RPVQTAGRVGEEFEARRQEMLPSPFALDALARAFRAASETPDVVVASVAAIMCSAPDRVN 238 Query: 240 EVLSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITNS 299 EVL L CE YGLR+ PSK A PM+KWV+PSM+SVV++A+ R++ ++ Sbjct: 239 EVLRLQTGCEVHSSRQEAPEAYGLRFWPSKGADPMVKWVVPSMSSVVQEAIRRLQGTSSE 298 Query: 300 ARIISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLLRLAPRGHIS---FCRHHKIPY 356 AR ++ WYE P ++YLP LEHLR K L +EL ++L P S +C +K+P Sbjct: 299 ARQVARWYEDNPSAMYLPSHLEHLRG-KDLFMDELGEVLFAEPVSRTSPGQWCTGNKVPT 357 Query: 357 TGRGLTWKVRFSDLEDSLLSRLPAEFP-FXAIKSSYHSRAICTV 399 G V+FSD+E ++L LP FP A +S A+C V Sbjct: 358 FSVGKKKAVKFSDVEAAILGELPRGFPWLDADIGLRYSEALCLV 401 >ref|YP_004487192.1| integrase family protein [Delftia sp. Cs1-4] gb|AEF88837.1| integrase family protein [Delftia sp. Cs1-4] Length = 689 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 140/406 (34%), Positives = 203/406 (50%), Gaps = 23/406 (5%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 M +P+ A+AN +I AR +L+ FG DLDFD D WD T + + G +R Sbjct: 1 MIATTPLKPKALRAAQANLDTYITRARTELTAFGSDLDFDSDCWDVTAYCLAR--GDRRA 58 Query: 61 RIVFDSWRVD------ENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIES 114 + WR L R + FA+AY+R + + + A A+ Sbjct: 59 K----QWRARLYFAEVAGAGGRTLSRRVQAFARAYVRSEVAHLSFSAMDRAVRAFHALGV 114 Query: 115 ALLEGRRSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKL-THSSF 173 A+ + + ++ + + A L T V +L A F+ L THS+ Sbjct: 115 AM-DSQGIESLTECDRTTFDAAVAELISSSGDATIDAVGPRLGKIARFLDDKLLCTHSTG 173 Query: 174 AWRSFIHRPRDGIRVGKEFDERRKKKLPTEASVDALGRIFCNAETPRDILISGIAALLCA 233 WR P G RVG+ F+ RR+K +P A++DAL R F A PRD+LI+ +AA+LC+ Sbjct: 174 LWRYQKRLPSTGGRVGEAFEARRRKLMPDPAALDALARAFNLATDPRDVLITSVAAILCS 233 Query: 234 SPDRISEVLSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRI 293 +P+R +EVL+LPA+CE E +GK GLRW SK P +K ++P M VV++AL R+ Sbjct: 234 APERFNEVLALPANCEVESVGEDGKTYLGLRWSGSKGYPGHVKLILPGMADVVREALRRL 293 Query: 294 RKITNSARIISEWYERYPDSLYLPPGLEHLRDRKYLSSEELRDLLRL--APR-GHISFCR 350 R IT AR ++ WY P LYLPP EHLR R+++ E++ DLL A R G + Sbjct: 294 RAITEPARTLARWYAANPTRLYLPPPYEHLRTREFIDFEDMADLLGTPGAKRDGARRWVL 353 Query: 351 HHKIPYT------GRGLTWKVRFSDLEDSLLSRLPAEFPFXAIKSS 390 IP + G VRFSD E + +LP +FP K+ Sbjct: 354 KAGIPISKVVRVAGHIPASVVRFSDFERYAIGQLPPQFPIADAKTG 399 >ref|YP_001280023.1| hypothetical protein PsycPRwf_1124 [Psychrobacter sp. PRwf-1] gb|ABQ94073.1| Uncharacterized protein-like protein [Psychrobacter sp. PRwf-1] Length = 655 Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 172/332 (51%), Gaps = 15/332 (4%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 M+ +I F P + N +FI + +L+ FG D +W++ W IK Sbjct: 1 MSNVIEFIPAYRHAPAKNMAEFIRFCKEELTTFGPDF-----SWESDYWPEIK------- 48 Query: 61 RIVFDSWRVD-ENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEG 119 + F +W V N L FAKAYIRY + + IE AL E Sbjct: 49 -LFFGNWEVSRHTTNQTTLQQPLLDFAKAYIRYTLSFKRKPQARYEGTIFKCIEKALNEA 107 Query: 120 RRSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSFAWRSFI 179 +D S + IL+RA +L ER+S+++ Y + + L A F+S +L + W++ Sbjct: 108 GYPSDISILNHEILDRASELARERFSKSSNYHIGRNLQKLAEFVSAKQLIPNHLDWKNPN 167 Query: 180 HRPRDGIRVGKEFDERRKKKLPTEASVDALGRIFC-NAETPRDILISGIAALLCASPDRI 238 R D +R G + + R+KKLP+E +++AL +F N P DI ++ AL+ P RI Sbjct: 168 SRVIDTVRTGLKAQKIREKKLPSEVALNALAEVFASNPTEPSDIFVTSTCALMLCVPSRI 227 Query: 239 SEVLSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITN 298 SEVLSL +CE +K +G YG+R+ P K APP IKWV +M S+ K+A+ RIR +T+ Sbjct: 228 SEVLSLHVNCEVHEKRRDGSEAYGIRFLPGKGAPPQIKWVPTAMVSLAKEAIGRIRTMTD 287 Query: 299 SARIISEWYERYPDSLYLPPGLEHLRDRKYLS 330 AR I+ WYE+ PD Y P ++ D YL+ Sbjct: 288 EARRIALWYEKNPDKFYRHPDCPNVADDDYLT 319 >ref|YP_390600.1| putative integrase [Thiomicrospira crunogena XCL-2] gb|ABB40926.1| putative integrase [Thiomicrospira crunogena XCL-2] Length = 676 Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 14/321 (4%) Query: 1 MTVLILFRPRHELDAEANAVDFIDMARNQLSVFGKDLDFDVDTWDATEWLNIKCHGAKRQ 60 M +I F PR E DA N DFI + QL+VFG DL++ W + N G K + Sbjct: 1 MPSVIQFIPRAERDASKNLEDFISTCKRQLTVFGADLNWS--DWKWPKAANFTKVGVKSR 58 Query: 61 RIVFDSWRVDENGNSVPLDDRFRPFAKAYIRYMQGLRPTKLVAQRLAALRAIESALLEGR 120 + N +S L F FAKAY RY QG +PT + + ALR IE ALLE Sbjct: 59 SV---------NPDSDLLAPEFMDFAKAYFRYQQGHKPT-VAKNEMRALRTIEQALLEHN 108 Query: 121 RSADPSKICPSILNRACQLLAERYSQTTAYRVSQQLNAFANFISRHKLTHSSF-AWRSFI 179 SAD SKI S+L+ A + + Y + +Y +++ A F+S L +W++ I Sbjct: 109 GSADISKISISVLDEAVVVARQSYEKMASYHAGREIERLAKFVSDKNLVPEKLDSWKNPI 168 Query: 180 HRPRDGIRVGKEFDERRKKKLPTEASVDALGRIFC-NAETPRDILISGIAALLCASPDRI 238 R D + G++ R+KKLP+ ++A+ IF N + PRDI S + A+L +P RI Sbjct: 169 KRANDRVNTGQKAKSDREKKLPSSDVLEAMAEIFASNPDNPRDIFTSSVFAMLMCAPSRI 228 Query: 239 SEVLSLPADCEFEQKLPNGKVVYGLRWRPSKDAPPMIKWVIPSMTSVVKKALSRIRKITN 298 +E+L LP DCE E+K G + YG R+ K IKW+ M + K+A++RI+ +T Sbjct: 229 AEILLLPVDCEVEEKDSQGDIQYGWRFYSGKGFGGDIKWIPKVMVPIAKEAIARIKSLTA 288 Query: 299 SARIISEWYERYPDSLYLPPG 319 AR +++W E +P S Y G Sbjct: 289 PARDLAKWIEDHPRSFYPHTG 309