BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0225.p (109 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775807.1| universal stress protein [Herbaspirillum ser... 225 2e-57 ref|YP_004751364.1| Universal stress protein [Collimonas fungivo... 107 9e-22 ref|ZP_04577433.1| universal stress protein UspA [Oxalobacter fo... 104 4e-21 ref|YP_001100591.1| universal stress family protein [Herminiimon... 104 5e-21 ref|ZP_08276002.1| Universal stress protein [Oxalobacteraceae ba... 101 4e-20 ref|YP_001098742.1| hypothetical protein HEAR0391 [Herminiimonas... 100 1e-19 ref|ZP_04579587.1| universal stress protein UspA [Oxalobacter fo... 97 7e-19 ref|YP_001352123.1| universal stress protein (Usp) [Janthinobact... 94 5e-18 ref|YP_003777268.1| universal stress protein [Herbaspirillum ser... 89 2e-16 ref|YP_001021826.1| hypothetical protein Mpe_A2637 [Methylibium ... 88 5e-16 >ref|YP_003775807.1| universal stress protein [Herbaspirillum seropedicae SmR1] gb|ADJ63899.1| universal stress protein [Herbaspirillum seropedicae SmR1] Length = 157 Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/109 (99%), Positives = 109/109 (100%) Query: 1 LSVAEDIVQWAVIDGTAINYLQVENDILENAKSNVARLAALAKSADVPCETFTVKAVHPY 60 LSVAEDIVQWAVIDGTAINYLQVEN+ILENAKSNVARLAALAKSADVPCETFTVKAVHPY Sbjct: 49 LSVAEDIVQWAVIDGTAINYLQVENEILENAKSNVARLAALAKSADVPCETFTVKAVHPY 108 Query: 61 EEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 EEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR Sbjct: 109 EEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 157 >ref|YP_004751364.1| Universal stress protein [Collimonas fungivorans Ter331] gb|AEK60541.1| Universal stress protein [Collimonas fungivorans Ter331] Length = 158 Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 1/110 (0%) Query: 1 LSVAEDIVQWAVIDGT-AINYLQVENDILENAKSNVARLAALAKSADVPCETFTVKAVHP 59 LSVAE + + T A + E ++L AK NV ++A A++A VPCE T +A +P Sbjct: 49 LSVAEPYPFSPMAESTMATDPGTYEENMLALAKLNVQKVADAARNAGVPCEMLTAQAFNP 108 Query: 60 YEEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 EEI++ A HCDAIFMASHGR GL R LGS+TQ+VLA++TIPVLV R Sbjct: 109 DEEIISAAEKYHCDAIFMASHGRSGLSRLFLGSKTQRVLAHSTIPVLVLR 158 >ref|ZP_04577433.1| universal stress protein UspA [Oxalobacter formigenes HOxBLS] gb|EEO28395.1| universal stress protein UspA [Oxalobacter formigenes HOxBLS] Length = 145 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 53/113 (46%), Positives = 76/113 (67%), Gaps = 9/113 (7%) Query: 6 DIVQWAVIDGTAINYLQV-----ENDILE----NAKSNVARLAALAKSADVPCETFTVKA 56 +IV ++V + + N ++ E+D + +A+S V R+A LAK+A VPCET ++ Sbjct: 33 EIVGFSVAEPLSFNQIESLTKSGESDYMVREQLSAQSRVQRIAELAKAAGVPCETVVTQS 92 Query: 57 VHPYEEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 P+EEI+ AS HCD IFMAS+GRKGL + +GS+TQKVLA A +PVLV+R Sbjct: 93 TKPHEEIVRAASEYHCDCIFMASNGRKGLNKLFIGSETQKVLATAQVPVLVYR 145 >ref|YP_001100591.1| universal stress family protein [Herminiimonas arsenicoxydans] emb|CAL62469.1| putative universel stress protein UspA-like [Herminiimonas arsenicoxydans] Length = 140 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 48/87 (55%), Positives = 65/87 (74%) Query: 23 VENDILENAKSNVARLAALAKSADVPCETFTVKAVHPYEEILAHASHQHCDAIFMASHGR 82 +E D+ + A S+ + AK A V CE TV VHPY+EI+ A+ HCDAIFMASHG+ Sbjct: 54 IEEDMQKRAVSDANFVEECAKKAGVACEVHTVTGVHPYQEIIKAANDFHCDAIFMASHGK 113 Query: 83 KGLERFILGSQTQKVLANATIPVLVFR 109 KG+++ +LGS+TQKVLA++TIPVLV+R Sbjct: 114 KGIDKILLGSETQKVLAHSTIPVLVYR 140 >ref|ZP_08276002.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30529.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] Length = 145 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/110 (48%), Positives = 74/110 (67%), Gaps = 1/110 (0%) Query: 1 LSVAEDIVQWAVIDGT-AINYLQVENDILENAKSNVARLAALAKSADVPCETFTVKAVHP 59 LSVAE + +G I+ + +LE A+SNV ++A A +A+V CET ++ P Sbjct: 36 LSVAEPYPYSPLSEGAITIDSTAYQEKMLEIARSNVRQIADAASAANVTCETHVRESFSP 95 Query: 60 YEEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 YEEI++ A CD +FMASHGRKGL + +GS+TQKVLA++T+PVLVFR Sbjct: 96 YEEIVSVADLHGCDVVFMASHGRKGLNKLFVGSETQKVLAHSTLPVLVFR 145 >ref|YP_001098742.1| hypothetical protein HEAR0391 [Herminiimonas arsenicoxydans] emb|CAL60613.1| Universal stress protein UspA [Herminiimonas arsenicoxydans] Length = 147 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 3/112 (2%) Query: 1 LSVAEDIVQWAVIDGTAI---NYLQVENDILENAKSNVARLAALAKSADVPCETFTVKAV 57 L VAE V A+++G + + + + E A+ NV + AALA++ V C+T + Sbjct: 36 LCVAEPYVYSALVEGAGVFPMDSVAYDEKAQEIAQHNVDKAAALARAQGVTCKTAVALSF 95 Query: 58 HPYEEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 PYEEI+ A CD IFMASHGRKGL + +GS+TQKVLA++TIPVLVFR Sbjct: 96 SPYEEIVRTAEASACDVIFMASHGRKGLNKLFVGSETQKVLAHSTIPVLVFR 147 >ref|ZP_04579587.1| universal stress protein UspA [Oxalobacter formigenes OXCC13] gb|EEO30560.1| universal stress protein UspA [Oxalobacter formigenes OXCC13] Length = 145 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 6/112 (5%) Query: 1 LSVAEDIV---QWAVIDGTAINYLQVENDILENAKSNVARLAALAKSADVPCETFTVKAV 57 LSVAE + A+ T +YL E +A+S V R+A +A+ A VPCET ++ Sbjct: 37 LSVAEPLSFNQIEALTKSTESDYLLREQ---LSAQSRVKRIAEMAEEAGVPCETVVAQST 93 Query: 58 HPYEEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 P EEI+ A CD IFMASHGRKGL + +GS+TQKVLA A +PVLV+R Sbjct: 94 KPNEEIVRIADEHDCDCIFMASHGRKGLNKLFIGSETQKVLATAHVPVLVYR 145 >ref|YP_001352123.1| universal stress protein (Usp) [Janthinobacterium sp. Marseille] gb|ABR90388.1| universal stress protein (Usp) [Janthinobacterium sp. Marseille] Length = 147 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 1 LSVAEDIVQWAVIDGTAI---NYLQVENDILENAKSNVARLAALAKSADVPCETFTVKAV 57 LSVAE V +++G + + + ++ + E A+ ++ ++ A + V C+T + Sbjct: 36 LSVAEPYVYMGLMEGAGVFPTDPVMYDDKVKELAQKHLDKVEAATRDKGVSCKTVVSVGL 95 Query: 58 HPYEEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 PYEEI+ A Q CD IFMASHGRKGL + +GS+TQKVLA+ ++PVLV R Sbjct: 96 SPYEEIVRVAEEQKCDVIFMASHGRKGLNKLFIGSETQKVLAHTSLPVLVLR 147 >ref|YP_003777268.1| universal stress protein [Herbaspirillum seropedicae SmR1] emb|CAM32578.1| Universal stress protein [Herbaspirillum seropedicae] gb|ADJ65360.1| universal stress protein [Herbaspirillum seropedicae SmR1] Length = 145 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/93 (48%), Positives = 61/93 (65%) Query: 17 AINYLQVENDILENAKSNVARLAALAKSADVPCETFTVKAVHPYEEILAHASHQHCDAIF 76 AI+ E ++ A+ ++ ++ A +A VPC+T V + +P EEI+ A CDAIF Sbjct: 53 AIDPALYEENVKTLAQQHIKKITDAATAAGVPCQTEIVMSFNPDEEIIKAAQLHACDAIF 112 Query: 77 MASHGRKGLERFILGSQTQKVLANATIPVLVFR 109 MASHGR GL R LGS+TQKVL ++TIPVLV R Sbjct: 113 MASHGRSGLSRIFLGSKTQKVLTHSTIPVLVLR 145 >ref|YP_001021826.1| hypothetical protein Mpe_A2637 [Methylibium petroleiphilum PM1] gb|ABM95591.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 144 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 36/61 (59%), Positives = 48/61 (78%) Query: 49 CETFTVKAVHPYEEILAHASHQHCDAIFMASHGRKGLERFILGSQTQKVLANATIPVLVF 108 CET+T++A+HPYE I+ HAS + CD I MASHGR+G+ +LGS+TQK+L + IPVLV Sbjct: 84 CETYTIEALHPYEAIIEHASQRGCDLIVMASHGRRGMSALLLGSETQKLLTHTAIPVLVV 143 Query: 109 R 109 R Sbjct: 144 R 144