BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0205.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001984131.1| hypothetical protein CJA_3679 [Cellvibrio ja... 230 1e-58 ref|YP_003335006.1| hypothetical protein Dd586_3470 [Dickeya dad... 163 3e-38 ref|YP_564000.1| hypothetical protein Sden_2999 [Shewanella deni... 155 4e-36 ref|YP_003003032.1| hypothetical protein Dd1591_0672 [Dickeya ze... 155 5e-36 ref|YP_900057.1| hypothetical protein Ppro_0365 [Pelobacter prop... 153 2e-35 ref|ZP_01693961.1| hypothetical protein M23134_06090 [Microscill... 150 2e-34 ref|YP_684350.1| hypothetical protein RD1_4227 [Roseobacter deni... 139 5e-31 ref|YP_004692611.1| hypothetical protein RLO149_c037340 [Roseoba... 135 5e-30 ref|YP_003123594.1| hypothetical protein Cpin_3931 [Chitinophaga... 130 3e-28 ref|ZP_05547121.1| conserved hypothetical protein [Parabacteroid... 129 4e-28 >ref|YP_001984131.1| hypothetical protein CJA_3679 [Cellvibrio japonicus Ueda107] gb|ACE85188.1| hypothetical protein CJA_3679 [Cellvibrio japonicus Ueda107] Length = 256 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 121/261 (46%), Positives = 161/261 (61%), Gaps = 14/261 (5%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLNQGKLLSF 61 M + +R LK KF G +PA F+ LIDSM+NI++EGFD++A DGL++SQ G+LLSF Sbjct: 1 MEKLDRSALKNKFKKGRLPAEQDFANLIDSMVNILEEGFDRSANDGLRMSQTGNGRLLSF 60 Query: 62 YQNIDIKSPIWSVQLNTADGGLAFGNDANPAALTLRQRTIPDGEEVP-------PDAFEL 114 Y+NI + SP W ++L ++D L G A+P L+L G + P A L Sbjct: 61 YRNIAVDSPQWFLELGSSDNKLHLGTPASPRVLSLHASDGDSGARIAVGINQEDPQA-TL 119 Query: 115 DLKGRMVADGRQGRPGLLEVKADGKWHDITGPLEGCNAFEIVAGV-GKPGSGKYALMHAF 173 D+ G + ++GR+G+ G L V ADG+WHDIT L GC AFEIVAGV G GKYAL+HAF Sbjct: 120 DVGGTLASNGRRGQFGELPVAADGQWHDITSALTGCEAFEIVAGVGGADADGKYALLHAF 179 Query: 174 ALMTFNGRGQIDERQSHFGSKCNRLQLQWVADTSRARHAYILQMRVGCPYDNRDATTQTW 233 AL TFNG+ I ++ FG+KCNR+ L+W + + + LQMRV CPY W Sbjct: 180 ALNTFNGKNSITPHEAWFGNKCNRIDLRWQSVPELGQFHFKLQMRVQCPY-----GKDIW 234 Query: 234 VSYHISMLWSDPLMQASAIDP 254 V YH++ LW DPLM S P Sbjct: 235 VKYHLTRLWFDPLMLDSNQPP 255 >ref|YP_003335006.1| hypothetical protein Dd586_3470 [Dickeya dadantii Ech586] gb|ACZ78300.1| conserved hypothetical protein [Dickeya dadantii Ech586] Length = 275 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 144/274 (52%), Gaps = 35/274 (12%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLN-QGKLLS 60 MA+RNR TLK F G MP+A FS+LIDS +N ++EGFDKT GLKV+ L+ +L++ Sbjct: 1 MAKRNRGTLKNYFRQGAMPSAEHFSDLIDSSVNKIEEGFDKTPEHGLKVAALDAHARLMT 60 Query: 61 FYQNIDIKSPIWSVQL-----------NTADGGLAFGNDANPAALTLRQRTIPDGEEVPP 109 FY++ D +WSV L + +DG ++A LT R G Sbjct: 61 FYRDSDPSRELWSVGLQPDSDRLQIDRHLSDGQEVMDDEAPLLTLTPEGRM---GVNTSA 117 Query: 110 DAFELDLKGRMVADGRQGRPGLLEVKADGKWHDITGPLEGCNAFEIVAGVGKPGSGKYAL 169 LD+ G + A GR G + ADG+WHDIT LEGC AFE+VAGVG SG+YAL Sbjct: 118 PRHALDVNGVIGAPGRAGAQWAETLPADGQWHDITPKLEGCQAFEVVAGVGIRHSGRYAL 177 Query: 170 MHAFALMT----------FNGRGQIDERQSHFGSKCNRLQLQWVADTSRAR-----HAYI 214 +HA AL T F + +I+ R +++ S+ ++L L+W+ D + Y Sbjct: 178 LHAIALNTCAPSGFLFNFFGHKNRINARHAYYHSRADKLTLRWLRDDTPTHGHDGIRPYR 237 Query: 215 LQMRVGCPYDNRDATTQTWVSYHISMLWSDPLMQ 248 LQ+R Y + + YH++ LW D M Sbjct: 238 LQIRTHTSYGD-----GIVIRYHLTQLWHDAYMH 266 >ref|YP_564000.1| hypothetical protein Sden_2999 [Shewanella denitrificans OS217] gb|ABE56277.1| hypothetical protein Sden_2999 [Shewanella denitrificans OS217] Length = 305 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 141/297 (47%), Gaps = 55/297 (18%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLNQ-GKLLS 60 MA+RNR TLK FS G +P++ FS+LIDS LN ++EGFDK+ +G KVS L + LLS Sbjct: 1 MAKRNRSTLKNYFSKGSLPSSEHFSDLIDSCLNSLEEGFDKSVNEGFKVSSLEEDAHLLS 60 Query: 61 FYQNIDIKSPIWSVQLNTADGGLAF------------------------GNDANPAALTL 96 FY+ + +WS++ +T L F G P ++ Sbjct: 61 FYRQNAPQQQLWSIKFDTQIDALLFSSPNAQYATQESGAAANGNTGGVSGESQGPQSVLA 120 Query: 97 RQRTIPDGEEVPPDAFELDLKGRMVADGRQG------RPGLLEVKADGKWHDITGPLEGC 150 G L++ G + A GR+G P +L V+ADG WH I+ LEGC Sbjct: 121 LSPNACVGINCDRPTHTLEVNGTLKASGRKGGAFEEESPEILPVRADGNWHSISPKLEGC 180 Query: 151 NAFEIVAGVGKPGSGKYALMHAFALMT-------------FNGRGQIDERQSHFGSKCNR 197 A E+VAGVG +G+Y ++ A A+ FN + I + +++ S ++ Sbjct: 181 QALEVVAGVGIKSTGRYGMLRAIAMNACDPDAWWFDIFNWFNVKTSIKSQHAYYTSSADK 240 Query: 198 LQLQWV------ADTSRARHAYILQMRVGCPYDNRDATTQTWVSYHISMLWSDPLMQ 248 L L+WV D S A Y LQ+R N D ++ YHI+ LW D MQ Sbjct: 241 LCLRWVKESKTKGDGSEAYRPYYLQIR-----SNTDYGEGVYIRYHITKLWFDNYMQ 292 >ref|YP_003003032.1| hypothetical protein Dd1591_0672 [Dickeya zeae Ech1591] gb|ACT05553.1| conserved hypothetical protein [Dickeya zeae Ech1591] Length = 275 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 142/276 (51%), Gaps = 39/276 (14%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLN-QGKLLS 60 MA+RNR TLK F G MP+A F++LIDS +N ++EGFDKT G+K++ L +L++ Sbjct: 1 MAKRNRGTLKNYFRQGAMPSAEHFADLIDSSINALEEGFDKTPEHGVKIAALEPHARLMT 60 Query: 61 FYQNIDIKSPIWSVQLNTADGGLAFGN----------DANPAALTLRQRTIPDGE---EV 107 FY++ D +WSV L L D +P LTL PDG Sbjct: 61 FYRDSDPTRALWSVGLQPDGDQLRIHRHPSDERDNTADTDPL-LTL----TPDGRAGVNT 115 Query: 108 PPDAFELDLKGRMVADGRQGRPGLLEVKADGKWHDITGPLEGCNAFEIVAGVGKPGSGKY 167 LD+ G + A GR G + ADG+WHD+T LEGC AFE+VAGVG SG+Y Sbjct: 116 TAPRHALDVNGVIGAQGRAGTQWADRLPADGEWHDLTPQLEGCQAFEVVAGVGIRHSGRY 175 Query: 168 ALMHAFALMT----------FNGRGQIDERQSHFGSKCNRLQLQWVADTSRAR-----HA 212 AL+HA AL T F + +I R +++ S+ ++L L+W+ D + A Sbjct: 176 ALIHAIALNTCAPSGFWFNLFGRKNRISARHAYYHSRADKLTLRWLRDDTPAHGQDGVRP 235 Query: 213 YILQMRVGCPYDNRDATTQTWVSYHISMLWSDPLMQ 248 Y LQ+R Y + + YH++ LW D M Sbjct: 236 YRLQIRTHTGYGD-----GIVIRYHLTRLWHDAYMH 266 >ref|YP_900057.1| hypothetical protein Ppro_0365 [Pelobacter propionicus DSM 2379] gb|ABK97999.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379] Length = 265 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/275 (38%), Positives = 140/275 (50%), Gaps = 47/275 (17%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKV-SQLNQGKLLS 60 M +RNRDTLK F G +P+ F +LIDS LN+VDEGF KT +G++V +Q L+S Sbjct: 1 MPKRNRDTLKNFFRKGALPSERQFHDLIDSALNMVDEGFSKTPDNGIEVATQEEHHTLMS 60 Query: 61 FYQNIDIKSPIWSVQLNTADGGLAFGNDANPAALTLRQRTIPDGEEVPP----------- 109 F + + WS L F D AL+ R +G E P Sbjct: 61 FSRAGEPGRFDWS---------LGFTRDRERNALSFSARD-QEGNETPSVTLDPGGKVGV 110 Query: 110 ----DAFELDLKGRMVADGR--QGRPGLLEVKADGKWHDITGPLEGCNAFEIVAGVGKPG 163 F LD+ G + + GR G G V ADGKWHDITGPL+GC AFE++AGVGK Sbjct: 111 NTQAPEFTLDVAGVIRSQGRIGVGPDGNSSVPADGKWHDITGPLDGCQAFEVMAGVGKKR 170 Query: 164 SGKYALMHAFALMTFNGRG----------QIDERQSHFGSKCNRLQLQWVADTSRARHAY 213 +GKYALMHAFAL TFN G +I Q+H+ S ++L+L+W S Y Sbjct: 171 TGKYALMHAFALNTFNPVGFLFNFLNLKKRISYHQAHYRSLGDKLKLRW----SGTNREY 226 Query: 214 ILQMRVGCPYDNRDATTQTWVSYHISMLWSDPLMQ 248 LQ++ N D + ++++ LW D M Sbjct: 227 RLQLK-----SNSDYGDGIRIRFYLTRLWFDSFMN 256 >ref|ZP_01693961.1| hypothetical protein M23134_06090 [Microscilla marina ATCC 23134] gb|EAY25102.1| hypothetical protein M23134_06090 [Microscilla marina ATCC 23134] Length = 213 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 127/221 (57%), Gaps = 12/221 (5%) Query: 32 MLNIVDEGFDKTAADGLKVSQLNQGK-LLSFYQNIDIKSPIWSVQLNTADGGLAFGNDAN 90 M+N VD+G K DGL +S + K L+SF+++I+ KSP WS+++++ L N+ Sbjct: 1 MINKVDDGLSKNLDDGLTLSPIGSSKKLMSFFKSIEDKSPAWSIEIDSGTANLDINNNRG 60 Query: 91 PAALTLRQRTIPDGEEVPPDAFELDLKGRMVADGRQGRPGLLEVKADGKWHDITGPLEGC 150 + ++L+ P+ +ELD+ G + GR G EV ADGKWH + L+GC Sbjct: 61 ESVVSLKNDGRVGVNNNDPE-YELDVNGSIGMIGRVGTFHQGEVLADGKWHPVLTELDGC 119 Query: 151 NAFEIVAGVGKPGSGKYALMHAFALMTF-NGRGQIDERQSHFGSKCNRLQLQWVADTSRA 209 + E+ AGVGK +GKY+++HA AL TF + +I+ Q+++G KCN++QL+W T Sbjct: 120 HILEVAAGVGKKKTGKYSVIHAMALSTFGKSKNKINITQAYYGVKCNKIQLRWTGTT--- 176 Query: 210 RHAYILQMRVGCPYDNRDATTQTWVSYHISMLWSDPLMQAS 250 + Y L+MR C Y + +V Y+IS LW D M S Sbjct: 177 -YKYNLEMRTRCNYGG-----EFYVKYYISSLWFDKWMDES 211 >ref|YP_684350.1| hypothetical protein RD1_4227 [Roseobacter denitrificans OCh 114] gb|ABG33664.1| hypothetical protein RD1_4227 [Roseobacter denitrificans OCh 114] Length = 286 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 89/279 (31%), Positives = 135/279 (48%), Gaps = 40/279 (14%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLNQG-KLLS 60 M +++R TLK F G +P A F +LIDS +N VD+GF KT DGL+++ + K+LS Sbjct: 1 MTKQDRPTLKSFFRSGALPTAKEFGDLIDSTVNQVDDGFAKTDTDGLRLNSVGSSLKVLS 60 Query: 61 FYQNIDIKSPIWSVQLNTADGGLAFGNDANPAALTLRQRTIPDGE---EVPPD------- 110 YQ + P W ++ DG L F D L + + P G+ PP+ Sbjct: 61 LYQGLGTPKPSWIIEHGEKDGVLNFRPDEGQDGLKIDEEAKPSGKAENTFPPNMTMTRDG 120 Query: 111 ---------AFELDLKGRMVADGRQG--RPGLLEVKADGKWHDITGPLEGCNAFEIVAGV 159 + D+ G GR G P V AD WH IT + GC E+VAG Sbjct: 121 KIGINQEEPEWRFDVGGVARMQGRIGVATPKYKTVPADRGWHPITEAMTGCQILEVVAGT 180 Query: 160 -GKPGSGKYALMHAFALMTFNGRGQ----------IDERQSHFGSKCNRLQLQWVADTSR 208 G+PG G+Y++M A A+ ++ R + I + + +GS +R+ L+WVAD + Sbjct: 181 GGEPGKGRYSIMRAIAMNAYHPRNRFLNWFFRRRSIKTQTAMYGSYADRICLRWVADDEK 240 Query: 209 ARHAYILQMRVGCPYDNRDATTQTWVSYHISMLWSDPLM 247 H YIL+++ ++ + V Y+I+ LW D M Sbjct: 241 EHH-YILELKTNAKFEGKV------VRYYITKLWFDSAM 272 >ref|YP_004692611.1| hypothetical protein RLO149_c037340 [Roseobacter litoralis Och 149] gb|AEI95648.1| hypothetical protein RLO149_c037340 [Roseobacter litoralis Och 149] Length = 287 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 134/279 (48%), Gaps = 40/279 (14%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLNQG-KLLS 60 M +++R TLK F G +P A F +LIDS +N VD+GF KT DGL+++ + K+LS Sbjct: 1 MTKQDRPTLKSFFRSGSLPTAKEFGDLIDSTVNQVDDGFAKTDTDGLRLNSVGSSLKVLS 60 Query: 61 FYQNIDIKSPIWSVQLNTADGGLAFGNDANPAALTLRQRTIPDGE---EVPPD------- 110 YQ + P W ++ DG L F D L + + G+ PP+ Sbjct: 61 LYQGLGTPKPSWIIEHGEKDGVLNFRPDEGQDGLKIDEDAKSSGKTENTFPPNMTMTRDG 120 Query: 111 ---------AFELDLKGRMVADGRQG--RPGLLEVKADGKWHDITGPLEGCNAFEIVAGV 159 + D+ G GR G P V AD WH IT + GC E+VAG Sbjct: 121 MVGINQEEPEWRFDVGGVARMQGRIGVATPKYETVPADRGWHPITEAMTGCQILEVVAGT 180 Query: 160 -GKPGSGKYALMHAFALMTFNGRGQ----------IDERQSHFGSKCNRLQLQWVADTSR 208 G+PG G+Y++M A A+ ++ R + I + + +GS +R+ L+WVAD + Sbjct: 181 GGEPGKGRYSIMRAIAMNAYHPRNRFLNWFFRRRSIKTQTAMYGSYADRICLRWVADKEK 240 Query: 209 ARHAYILQMRVGCPYDNRDATTQTWVSYHISMLWSDPLM 247 H YIL+++ ++ + V Y+I+ LW D M Sbjct: 241 EHH-YILELKTNAEFEGK------LVRYYITKLWFDSAM 272 >ref|YP_003123594.1| hypothetical protein Cpin_3931 [Chitinophaga pinensis DSM 2588] gb|ACU61393.1| conserved hypothetical protein [Chitinophaga pinensis DSM 2588] Length = 262 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 130/251 (51%), Gaps = 23/251 (9%) Query: 7 RDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLNQGK-LLSFYQNI 65 R+ LK F +G++P F+ LIDS +N ++GF K +G+ V+ L K L+SFY+ Sbjct: 12 REELKEHFRNGKLPTEHHFAHLIDSTINKQEDGFSKDEENGMLVAALGSSKRLVSFYRTN 71 Query: 66 DIKSPIWSVQLNTADG-GLAFGNDANPA--------ALTLRQR-TIPDGEEVPPDAFELD 115 D P + ++ + + G N A + L Q + G P ++++ Sbjct: 72 DDLEPFFLMEKDERENPGFRMQPHTNGADEPSTDARSFFLHQNGNMGVGTRCNP-CYKME 130 Query: 116 LKGRMVADGRQGRPGLLEVKADGKWHDITGPLEGCNAFEIVAGVGKPGSGKYALMHAFAL 175 + G + +GR G + +V ADGKWH+I G L+ C AFE++A G+ SG++A+MHA+A+ Sbjct: 131 VTGFIAMEGRVGTYRIGKVPADGKWHEIIGGLDNCQAFEVIARTGRRNSGRFAIMHAYAV 190 Query: 176 MTFN--GRGQIDERQSHFGSKCNRLQLQWVADTSRARHAYILQMRVGCPYDNRDATTQTW 233 FN G+I + +H+G NRL+L+W T H Y LQ+R Y Sbjct: 191 SAFNKWSWGRIRKTSAHYGFFWNRLRLRWKGST----HHYGLQLRTNSNYG-----PDVE 241 Query: 234 VSYHISMLWSD 244 + Y I+ LW D Sbjct: 242 IYYRITRLWDD 252 >ref|ZP_05547121.1| conserved hypothetical protein [Parabacteroides sp. D13] ref|ZP_06077089.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] ref|ZP_07216751.1| conserved hypothetical protein [Bacteroides sp. 20_3] gb|EEU49837.1| conserved hypothetical protein [Parabacteroides sp. D13] gb|EEY82783.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gb|EFK61526.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 246 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 124/251 (49%), Gaps = 16/251 (6%) Query: 2 MARRNRDTLKRKFSDGEMPAASAFSELIDSMLNIVDEGFDKTAADGLKVSQLNQGK-LLS 60 M R NR+TLK F G MP F ELIDSM+NI D+G DK DGL+++ + ++S Sbjct: 1 MPRTNRNTLKEYFKRGSMPNQKHFYELIDSMVNISDDGIDKNPDDGLRLAPSKENSPVIS 60 Query: 61 FYQNIDIKSPIWSVQLNTADGGLAFGNDANPAALTLRQRTIPDGE-EVPPDAFELDLKGR 119 + NI P W + L + L+L P+G E+ ++ + G Sbjct: 61 LFTNIQDNIPEWKIYLGNNSQLHIIRQGQDEPILSLH----PNGRIEMNQPGMDIRINGS 116 Query: 120 MVADGRQGRPGLLEVKADGKWHDITGPLEGCNAFEIVAGVGKPGSGKYALMHAFALMTFN 179 + A G + ADG+WH + P EGC A+ I+AG GK SG+YAL+ A A+ + Sbjct: 117 LSATRFDG-AIRGKFPADGEWHTLQIPTEGCRAYRIMAGCGKLKSGQYALVEATAIHCYG 175 Query: 180 GRGQIDERQSHFGSKCNRLQLQWVADTSRARHAYILQMRVGCPYDNRDATTQTWVSYHIS 239 +I QS FGS N+++ +W + + LQ+R G RD +V + I+ Sbjct: 176 KHRKIRTNQSWFGSFFNKIKFRWYGPGQKCK----LQIRSG-----RDYGDNIFVCFQIT 226 Query: 240 MLWSDPLMQAS 250 LW D M AS Sbjct: 227 DLWKDYRMDAS 237