BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0191.p         (211 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775823.1| hypothetical protein Hsero_2416 [Herbaspiril...   421   e-116

>ref|YP_003775823.1| hypothetical protein Hsero_2416 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63915.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 224

 Score =  421 bits (1082), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/211 (98%), Positives = 210/211 (99%)

Query: 1   MMGSLDASAQMSKSVGWSSDYWYRGISLSAGLPVFQGTLNYDFRDGWYAGASGSSARNAK 60
           +MGSLDASAQMSKSVGWSSDYWYRGISLSAG PVFQGTLNYDFRDGWYAGASGSSARNAK
Sbjct: 14  IMGSLDASAQMSKSVGWSSDYWYRGISLSAGQPVFQGTLNYDFRDGWYAGASGSSARNAK 73

Query: 61  GAGVAQAVLFGGVSKRLDAATSLDLGAHVTSLVDAPSLAFTEIYAGVIRQSYSLRLYYSP 120
           GAGVAQAVLFGGVSKRLDAATSLDLGAHVTSLVDAPSLAFTEIYAGVIRQSYSLRLYYSP
Sbjct: 74  GAGVAQAVLFGGVSKRLDAATSLDLGAHVTSLVDAPSLAFTEIYAGVIRQSYSLRLYYSP 133

Query: 121 RYLGEKKQTTYVDFNTAYSLSSSWYLMLHLGWLEAMSVERTHFSNRYDARLGMGAYVGFW 180
           RYLGEKKQTTY+DFNTAYSLSSSWYLMLHLGWLEAMSVERTHFSNRYDARLGMGAYVGFW
Sbjct: 134 RYLGEKKQTTYIDFNTAYSLSSSWYLMLHLGWLEAMSVERTHFSNRYDARLGMGAYVGFW 193

Query: 181 NYQLSFNKVRSSEPLTVDAANRWVLNVSYSF 211
           NYQLSFNKVRSSEPLTVDAANRWVLNVSYSF
Sbjct: 194 NYQLSFNKVRSSEPLTVDAANRWVLNVSYSF 224