BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0189.p         (220 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775825.1| hypothetical protein Hsero_2418 [Herbaspiril...   441   e-122

>ref|YP_003775825.1| hypothetical protein Hsero_2418 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63917.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 220

 Score =  441 bits (1133), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 215/220 (97%), Positives = 216/220 (98%)

Query: 1   MTEIEIHSHDEIQRLLPWFVNGTLDEAMQQAVREHLQSCPSCHAAYEWASRERAAIYLEQ 60
           MTEIEIHSHDEIQRLLPWFVNGTLDEAMQQAVR HLQSCPSCHAAYEWASRERAAIYLEQ
Sbjct: 1   MTEIEIHSHDEIQRLLPWFVNGTLDEAMQQAVRAHLQSCPSCHAAYEWASRERAAIYLEQ 60

Query: 61  LPVPDVEASLARMRERIAPSKATQVSPVGHQHGPKKGASVFSRILALYGGKPWVPVAFAI 120
           LPVPDVEASLARMRERIAPSKATQ SPVG+QHGPKKGASVFSRILALYGGKPWVPVAFAI
Sbjct: 61  LPVPDVEASLARMRERIAPSKATQASPVGNQHGPKKGASVFSRILALYGGKPWVPVAFAI 120

Query: 121 QAALIVALGMGVFMQSEVKQYVALGNADIGKLKIALVFKPDTTVQRMQEILRATNANIVA 180
           QAALIVALGMGVFMQSEVKQYVALGNADIGKLKIALVFKPDTTVQRMQEILRATNANIVA
Sbjct: 121 QAALIVALGMGVFMQSEVKQYVALGNADIGKLKIALVFKPDTTVQRMQEILRATNANIVA 180

Query: 181 GPTVTFAYVVEVPASEETGALRHFRLAPEVSLVQSLGQGK 220
           GPTVTFAYVVEVPASEE GALRHFRLAPEVSLVQSLGQ K
Sbjct: 181 GPTVTFAYVVEVPASEEAGALRHFRLAPEVSLVQSLGQEK 220