BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0168.p         (544 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775845.1| methyl-accepting chemotaxis transducer trans...  1050   0.0  
ref|YP_003774726.1| methyl-accepting chemotaxis domain-containin...   358   9e-97
ref|ZP_02388833.1| methyl-accepting chemotaxis domain protein [B...   288   2e-75
ref|ZP_05587531.1| methyl-accepting chemotaxis domain-containing...   286   8e-75
ref|YP_443039.1| methyl-accepting chemotaxis domain-containing p...   283   7e-74
ref|ZP_02402998.1| methyl-accepting chemotaxis protein [Burkhold...   283   8e-74
ref|YP_001080580.1| methyl-accepting chemotaxis domain-containin...   282   9e-74
ref|YP_993074.1| methyl-accepting chemotaxis domain-containing p...   282   9e-74
ref|ZP_02411533.1| methyl-accepting chemotaxis protein [Burkhold...   282   1e-73
ref|YP_001058833.1| methyl-accepting chemotaxis protein [Burkhol...   281   2e-73

>ref|YP_003775845.1| methyl-accepting chemotaxis transducer transmembrane protein
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ63937.1| methyl-accepting chemotaxis transducer transmembrane protein
           [Herbaspirillum seropedicae SmR1]
          Length = 559

 Score = 1050 bits (2716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/544 (99%), Positives = 542/544 (99%)

Query: 1   LVALVAVLVVMWGTATVYAERARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVS 60
           LVALVAVLVVMWGTATVYAERARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVS
Sbjct: 16  LVALVAVLVVMWGTATVYAERARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVS 75

Query: 61  GEPRLLEQHQAVLDIRDGQRARPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGY 120
           GEPRLLEQHQAVLDIRDGQRARPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGY
Sbjct: 76  GEPRLLEQHQAVLDIRDGQRARPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGY 135

Query: 121 SPAELARLDEAWLMSDALASTERRAMQEMQGDAGARGPAQQMLHGDGYQLHRTSILQAFD 180
           SPAELARLDEAWLMSDALASTERRAMQEMQGDAGARGPAQQMLHGDGYQLHRTSILQAFD
Sbjct: 136 SPAELARLDEAWLMSDALASTERRAMQEMQGDAGARGPAQQMLHGDGYQLHRTSILQAFD 195

Query: 181 DMVGLLEQRTAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYRGSAGPLAQAASM 240
           DMVGLLEQRTAREVALAQLLAQRLAWLSTLLAVAVVVILA+SLRLLYRGSAGPLAQA SM
Sbjct: 196 DMVGLLEQRTAREVALAQLLAQRLAWLSTLLAVAVVVILAVSLRLLYRGSAGPLAQATSM 255

Query: 241 LAQLARGDLSDSAPVRARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDIAAGT 300
           LAQLARGDLSDSAPVRARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGD+AAGT
Sbjct: 256 LAQLARGDLSDSAPVRARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDMAAGT 315

Query: 301 EHVVARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVA 360
           EHVVARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVA
Sbjct: 316 EHVVARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVA 375

Query: 361 SAMAAIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQ 420
           SAMAAIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQ
Sbjct: 376 SAMAAIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQ 435

Query: 421 RTASAAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTS 480
           RTASAAAE KSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTS
Sbjct: 436 RTASAAAEFKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTS 495

Query: 481 GIDQVVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRLEAGYEDGCMVI 540
           GIDQVVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRLEAGYEDGCMVI
Sbjct: 496 GIDQVVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRLEAGYEDGCMVI 555

Query: 541 DMPA 544
           DMPA
Sbjct: 556 DMPA 559


>ref|YP_003774726.1| methyl-accepting chemotaxis domain-containing protein
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ62818.1| methyl-accepting chemotaxis domain-containing protein
           [Herbaspirillum seropedicae SmR1]
          Length = 568

 Score =  358 bits (920), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 211/553 (38%), Positives = 332/553 (60%), Gaps = 16/553 (2%)

Query: 1   LVALVAVLVVMWGTATVYAERARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVS 60
           L A++ VL+ +   A +  +R    L  A E+R+ +  LA E RQ  DDL +LAR+YVV+
Sbjct: 18  LTAVITVLMTLIVLAALAVDRYDARLNAANESRYASFLLATELRQSSDDLTRLARTYVVT 77

Query: 61  GEPRLLEQHQAVLDIRDGQRARPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGY 120
           G+P   +Q++A+LDIR+G++ARP+ YGR+YWD V ADG+ PRPDS   V+L  LM  AG+
Sbjct: 78  GDPSYEQQYEAILDIRNGKKARPEHYGRIYWDFVAADGKAPRPDSNQHVALTDLMRAAGF 137

Query: 121 SPAELARLDEAWLMSDALASTERRAMQEMQG-DAGARGP-----------AQQMLHGDGY 168
           + AE+ +L+EA   SDAL  TE  AM  ++G  A A+G            A++++H   Y
Sbjct: 138 TAAEMGKLEEAKNNSDALVKTEVIAMNMVKGLYADAQGNFTKRADPDLAQARELMHNHAY 197

Query: 169 QLHRTSILQAFDDMVGLLEQRTAREVALAQLLAQRLAWL-STLLAVAVVVILALSLRLLY 227
            +++  I++  D+   LL+ RT  +V  A+  A  +A L  +L+A+A+VV LA +L L+Y
Sbjct: 198 HVYKAKIMRPVDEFFALLDARTTEQVESARAQATHMATLFYSLIAIALVV-LACTLMLVY 256

Query: 228 RGSAGPLAQAASMLAQLARGDLSDSAPVRARGQVAALLDALQRLRKAIVRLVKGVHAGAA 287
                PLA AAS+  ++A GDL+       +G+   LL+AL  ++  +  +V  V  GA 
Sbjct: 257 HAIRNPLAHAASVARRVAHGDLTAQIDPAIKGETGELLEALTIMQSGLQTIVLDVRNGAQ 316

Query: 288 AIQNAAGDIAAGTEHVVARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACE 347
            I  +A +IA+GT  + +RTE+QA +L + A+SM++L  TV+Q+  +   AS LA  A  
Sbjct: 317 YINTSANEIASGTLDLSSRTEQQASSLEETASSMEELTSTVKQNAGNARLASELANTASG 376

Query: 348 VVRRSAAEVEQVASAMAAIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRT 407
           V  R    V +V   M AI  SS RI D+  +ID IA Q+ +L  +A++    +G  GR 
Sbjct: 377 VAVRGGEVVARVVDTMGAINESSKRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRG 436

Query: 408 LSSVAQDVSALAQRTASAAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQL 467
            + VA +V +LAQR+A+AA E+K+L + ++ +++ GS    +A   MRE V SV+RV+++
Sbjct: 437 FAVVATEVRSLAQRSAAAAKEIKTLIDNSVSKVEAGSTLVNEAGSTMREVVESVQRVTEI 496

Query: 468 IGQIAEVNLEQTSGIDQVVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEF 527
           I  I+  + EQ SGI+Q+ Q + Q+  +TQQN  L++Q ++A+ ++  Q  +LT     F
Sbjct: 497 ITGISNASQEQASGIEQIQQAINQMDQVTQQNAALVEQASAASESMQMQAHKLTDLVGAF 556

Query: 528 RLEAGYEDGCMVI 540
           +       G MV+
Sbjct: 557 KTPTAM--GMMVV 567


>ref|ZP_02388833.1| methyl-accepting chemotaxis domain protein [Burkholderia
           thailandensis Bt4]
          Length = 566

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 309/549 (56%), Gaps = 18/549 (3%)

Query: 1   LVALVAVLVVMWGTATVYAERARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVS 60
           L+ L+AV  V  G      + A + +A A + R+ +  LA E R+  DDL +LAR+YV +
Sbjct: 2   LLGLLAVAAVAIGFCQWRLDVANRRVAHAYQQRYVSTQLANELRRSSDDLTRLARTYVAT 61

Query: 61  GEPRLLEQHQAVLDIRDGQRARPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGY 120
           G+ +  +Q+  VL IR G+  RP  Y R+YWD   AD +P RP     +SL+ +M++AG+
Sbjct: 62  GDAKWEQQYNEVLAIRSGKAPRPLDYDRIYWDFRAAD-EPMRPGHGETISLQDMMKRAGF 120

Query: 121 SPAELARLDEAWLMSDALASTERRAMQEMQG----DAG---ARGP-----AQQMLHGDGY 168
           +  E A+L +A   S+ L  TE  AM  ++G    DAG    +GP     A+ ++    Y
Sbjct: 121 TDEEFAKLHDAEQNSNDLVKTETIAMNLVKGLTPDDAGNFTKQGPPDLDKARSLMFDANY 180

Query: 169 QLHRTSILQAFDDMVGLLEQRTAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYR 228
              +  I+   DD + LL+ RT   +A AQ  AQ    +S  +A+  +   AL L  L+R
Sbjct: 181 HRFKAKIMHPIDDFLKLLDARTEGAIASAQATAQTWKTVSAGVAIGALACFALMLHALFR 240

Query: 229 GSAGPLAQAASMLAQLARGDLS-----DSAPVRARGQVAALLDALQRLRKAIVRLVKGVH 283
                L  AAS   ++A GDL+     D    +A+ +++ ++ +LQ +   +VR+V  V 
Sbjct: 241 RVIAGLEVAASTAGRVAAGDLTSHFDADRVDPQAKNEISRVMRSLQTMNDGLVRIVSDVR 300

Query: 284 AGAAAIQNAAGDIAAGTEHVVARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLAR 343
           +G  AI  A+ +I AG   + ARTE+QA +L + AASM +L  TV+ +  +  QA+ +  
Sbjct: 301 SGTDAIATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENARQANMIGS 360

Query: 344 RACEVVRRSAAEVEQVASAMAAIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGV 403
            A   V + A  VE + + + AI ASS +I D+  LI+ IA Q+ +L  +A++    +G 
Sbjct: 361 DAVSTVEQGAVSVEHLVTTVNAISASSGKIADIISLIEGIAFQTNILALNAAVEAARAGE 420

Query: 404 GGRTLSSVAQDVSALAQRTASAAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVER 463
            GR  + VA +V +LAQR+++AA E+K L ET++  +++G  KA +    + E   ++ R
Sbjct: 421 QGRGFAVVASEVRSLAQRSSAAAKEIKDLIETSIDTVRDGVSKADEVGRHIVEVKRAIRR 480

Query: 464 VSQLIGQIAEVNLEQTSGIDQVVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQA 523
           V+ L+G+I   + EQ+ GI+QV   + Q+  +TQQN  L++Q  +A++A+++Q   L  A
Sbjct: 481 VADLVGEITSASEEQSRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAA 540

Query: 524 AAEFRLEAG 532
           A+ F+L  G
Sbjct: 541 ASIFKLPGG 549


>ref|ZP_05587531.1| methyl-accepting chemotaxis domain-containing protein [Burkholderia
           thailandensis E264]
          Length = 566

 Score =  286 bits (731), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 188/549 (34%), Positives = 308/549 (56%), Gaps = 18/549 (3%)

Query: 1   LVALVAVLVVMWGTATVYAERARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVS 60
           L+ L+AV  V  G      + A + +A A + R+ +  LA E R+  DDL +LAR+YV +
Sbjct: 2   LLGLLAVAAVAIGFCQWRLDVANRRVAHAYQQRYVSTQLANELRRSSDDLTRLARTYVAT 61

Query: 61  GEPRLLEQHQAVLDIRDGQRARPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGY 120
           G+ +  +Q+  VL IR G+  RP  Y R+YWD   AD +P RP     +SL+ +M++AG+
Sbjct: 62  GDAKWEQQYNEVLAIRSGKAPRPLDYDRIYWDFRAAD-EPMRPGHGETISLQDMMKRAGF 120

Query: 121 SPAELARLDEAWLMSDALASTERRAMQEMQG----DAG---ARGP-----AQQMLHGDGY 168
           +  E A+L +A   S+ L  TE  AM  ++G    DAG    +GP     A+ ++    Y
Sbjct: 121 TDEEFAKLHDAEQNSNDLVKTETIAMNLVKGLTPDDAGNFTKQGPPDLDKARSLMFDANY 180

Query: 169 QLHRTSILQAFDDMVGLLEQRTAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYR 228
              +  I+   DD + LL+ RT   +A AQ  AQ    +S  +A+  +   AL L  L+R
Sbjct: 181 HRFKAKIMHPIDDFLKLLDARTEGAIASAQATAQTWKTVSAGVAIGALACFALMLHALFR 240

Query: 229 GSAGPLAQAASMLAQLARGDLS-----DSAPVRARGQVAALLDALQRLRKAIVRLVKGVH 283
                L  AAS   ++A GDL+     D    +A+ +++ ++ +LQ +   +VR+V  V 
Sbjct: 241 RVIAGLEVAASTAGRVAAGDLTSHFDADRVDPQAKNEISRVMRSLQTMNDGLVRIVSDVR 300

Query: 284 AGAAAIQNAAGDIAAGTEHVVARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLAR 343
           +G  AI   + +I AG   + ARTE+QA +L + AASM +L  TV+ +  +  QA+ +  
Sbjct: 301 SGTDAIATVSHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENARQANMIGS 360

Query: 344 RACEVVRRSAAEVEQVASAMAAIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGV 403
            A   V + A  VE + + + AI ASS +I D+  LI+ IA Q+ +L  +A++    +G 
Sbjct: 361 DAVSTVEQGAVSVEHLVTTVNAISASSGKIADIISLIEGIAFQTNILALNAAVEAARAGE 420

Query: 404 GGRTLSSVAQDVSALAQRTASAAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVER 463
            GR  + VA +V +LAQR+++AA E+K L ET++  +++G  KA +    + E   ++ R
Sbjct: 421 QGRGFAVVASEVRSLAQRSSAAAKEIKDLIETSIDTVRDGVSKADEVGRHIVEVKRAIRR 480

Query: 464 VSQLIGQIAEVNLEQTSGIDQVVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQA 523
           V+ L+G+I   + EQ+ GI+QV   + Q+  +TQQN  L++Q  +A++A+++Q   L  A
Sbjct: 481 VADLVGEITSASEEQSRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAA 540

Query: 524 AAEFRLEAG 532
           A+ F+L  G
Sbjct: 541 ASIFKLPGG 549


>ref|YP_443039.1| methyl-accepting chemotaxis domain-containing protein [Burkholderia
           thailandensis E264]
 gb|ABC37240.1| methyl-accepting chemotaxis domain protein [Burkholderia
           thailandensis E264]
          Length = 605

 Score =  283 bits (723), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 182/528 (34%), Positives = 299/528 (56%), Gaps = 18/528 (3%)

Query: 22  ARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVSGEPRLLEQHQAVLDIRDGQRA 81
           A + +A A + R+ +  LA E R+  DDL +LAR+YV +G+ +  +Q+  VL IR G+  
Sbjct: 62  ANRRVAHAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWEQQYNEVLAIRSGKAP 121

Query: 82  RPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGYSPAELARLDEAWLMSDALAST 141
           RP  Y R+YWD   AD +P RP     +SL+ +M++AG++  E A+L +A   S+ L  T
Sbjct: 122 RPLDYDRIYWDFRAAD-EPMRPGHGETISLQDMMKRAGFTDEEFAKLHDAEQNSNDLVKT 180

Query: 142 ERRAMQEMQG----DAG---ARGP-----AQQMLHGDGYQLHRTSILQAFDDMVGLLEQR 189
           E  AM  ++G    DAG    +GP     A+ ++    Y   +  I+   DD + LL+ R
Sbjct: 181 ETIAMNLVKGLTPDDAGNFTKQGPPDLDKARSLMFDANYHRFKAKIMHPIDDFLKLLDAR 240

Query: 190 TAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYRGSAGPLAQAASMLAQLARGDL 249
           T   +A AQ  AQ    +S  +A+  +   AL L  L+R     L  AAS   ++A GDL
Sbjct: 241 TEGAIASAQATAQTWKTVSAGVAIGALACFALMLHALFRRVIAGLEVAASTAGRVAAGDL 300

Query: 250 S-----DSAPVRARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDIAAGTEHVV 304
           +     D    +A+ +++ ++ +LQ +   +VR+V  V +G  AI   + +I AG   + 
Sbjct: 301 TSHFDADRVDPQAKNEISRVMRSLQTMNDGLVRIVSDVRSGTDAIATVSHEIMAGNNDLS 360

Query: 305 ARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVASAMA 364
           ARTE+QA +L + AASM +L  TV+ +  +  QA+ +   A   V + A  VE + + + 
Sbjct: 361 ARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSDAVSTVEQGAVSVEHLVTTVN 420

Query: 365 AIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQRTAS 424
           AI ASS +I D+  LI+ IA Q+ +L  +A++    +G  GR  + VA +V +LAQR+++
Sbjct: 421 AISASSGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSA 480

Query: 425 AAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTSGIDQ 484
           AA E+K L ET++  +++G  KA +    + E   ++ RV+ L+G+I   + EQ+ GI+Q
Sbjct: 481 AAKEIKDLIETSIDTVRDGVSKADEVGRHIVEVKRAIRRVADLVGEITSASEEQSRGIEQ 540

Query: 485 VVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRLEAG 532
           V   + Q+  +TQQN  L++Q  +A++A+++Q   L  AA+ F+L  G
Sbjct: 541 VDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKLPGG 588


>ref|ZP_02402998.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           DM98]
 ref|ZP_04886539.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           1655]
 gb|EDU07523.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           1655]
          Length = 562

 Score =  283 bits (723), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 304/525 (57%), Gaps = 18/525 (3%)

Query: 22  ARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVSGEPRLLEQHQAVLDIRDGQRA 81
           A   +AQA + R+ +  LA E R+  DDL +LAR+YV +G+ +  +Q+  +L IR G+  
Sbjct: 29  ANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAP 88

Query: 82  RPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGYSPAELARLDEAWLMSDALAST 141
           RP  Y R+YWD   AD +P R +    +SL+++M++AG++  E A+L +A   S+ L  T
Sbjct: 89  RPLDYDRIYWDFRAAD-EPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKT 147

Query: 142 ERRAMQEMQG----DAG---ARGP-----AQQMLHGDGYQLHRTSILQAFDDMVGLLEQR 189
           E  AM  ++G    DAG    +GP     A+ ++    Y   +  I+   DD + LL+ R
Sbjct: 148 ETVAMNLVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDTR 207

Query: 190 TAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYRGSAGPLAQAASMLAQLARGDL 249
           T   +A AQ  AQ    +S  +A+ ++   AL L ++++     L  AAS  +++A GDL
Sbjct: 208 TEGAIARAQASAQTWKIISAAVAIGILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDL 267

Query: 250 S---DSAPV--RARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDIAAGTEHVV 304
           +   D+  V  +A+ +++ ++ ALQ +   +VR+V  V +G   I  A+ +I AG   + 
Sbjct: 268 TSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLS 327

Query: 305 ARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVASAMA 364
           ARTE+QA +L + AASM +L  TV+ +  +  QA+ +   A   V + +  VEQ+ + + 
Sbjct: 328 ARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVN 387

Query: 365 AIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQRTAS 424
           AI  +S +I D+  LI+ IA Q+ +L  +A++    +G  GR  + VA +V +LAQR++S
Sbjct: 388 AISTNSGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSS 447

Query: 425 AAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTSGIDQ 484
           AA E+K L ET++  +++G  KA +    + E   ++ RV+ L+G+I   + EQT GI+Q
Sbjct: 448 AAKEIKDLIETSIDTVRDGVSKADEVGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQ 507

Query: 485 VVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRL 529
           V   + Q+  +TQQN  L++Q  +A++A+++Q   L  AA+ F+L
Sbjct: 508 VDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKL 552


>ref|YP_001080580.1| methyl-accepting chemotaxis domain-containing protein [Burkholderia
           mallei NCTC 10247]
 ref|ZP_04974645.1| methyl-accepting chemotaxis protein [Burkholderia mallei
           2002721280]
 gb|ABO07039.1| methyl-accepting chemotaxis domain protein [Burkholderia mallei
           NCTC 10247]
 gb|EDK85520.1| methyl-accepting chemotaxis protein [Burkholderia mallei
           2002721280]
          Length = 570

 Score =  282 bits (722), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 304/525 (57%), Gaps = 18/525 (3%)

Query: 22  ARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVSGEPRLLEQHQAVLDIRDGQRA 81
           A   +AQA + R+ +  LA E R+  DDL +LAR+YV +G+ +  +Q+  +L IR G+  
Sbjct: 37  ANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAP 96

Query: 82  RPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGYSPAELARLDEAWLMSDALAST 141
           RP  Y R+YWD   AD +P R +    +SL+++M++AG++  E A+L +A   S+ L  T
Sbjct: 97  RPLDYDRIYWDFRAAD-EPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKT 155

Query: 142 ERRAMQEMQG----DAG---ARGP-----AQQMLHGDGYQLHRTSILQAFDDMVGLLEQR 189
           E  AM  ++G    DAG    +GP     A+ ++    Y   +  I+   DD + LL+ R
Sbjct: 156 ETVAMNLVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDAR 215

Query: 190 TAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYRGSAGPLAQAASMLAQLARGDL 249
           T   +A AQ  AQ    +S  +A+ ++   AL L ++++     L  AAS  +++A GDL
Sbjct: 216 TEGAIARAQASAQTWKIISAAVAIGILAFFALMLHIMFKRVLAGLEAAASTASRVAAGDL 275

Query: 250 S---DSAPV--RARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDIAAGTEHVV 304
           +   D+  V  +A+ +++ ++ ALQ +   +VR+V  V +G   I  A+ +I AG   + 
Sbjct: 276 TSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLS 335

Query: 305 ARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVASAMA 364
           ARTE+QA +L + AASM +L  TV+ +  +  QA+ +   A   V + +  VEQ+ + + 
Sbjct: 336 ARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVN 395

Query: 365 AIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQRTAS 424
           AI  +S +I D+  LI+ IA Q+ +L  +A++    +G  GR  + VA +V +LAQR++S
Sbjct: 396 AISTNSGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSS 455

Query: 425 AAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTSGIDQ 484
           AA E+K L ET++  +++G  KA +    + E   ++ RV+ L+G+I   + EQT GI+Q
Sbjct: 456 AAKEIKDLIETSIDTVRDGVSKADEVGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQ 515

Query: 485 VVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRL 529
           V   + Q+  +TQQN  L++Q  +A++A+++Q   L  AA+ F+L
Sbjct: 516 VDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKL 560


>ref|YP_993074.1| methyl-accepting chemotaxis domain-containing protein [Burkholderia
           mallei SAVP1]
 ref|ZP_02455827.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 9]
 ref|ZP_02481869.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           7894]
 ref|ZP_02506223.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           BCC215]
 ref|YP_002896543.1| methyl-accepting chemotaxis domain protein [Burkholderia
           pseudomallei MSHR346]
 ref|ZP_00439095.2| methyl-accepting chemotaxis domain protein [Burkholderia mallei GB8
           horse 4]
 ref|ZP_02268345.2| methyl-accepting chemotaxis protein [Burkholderia mallei PRL-20]
 ref|ZP_04884262.1| methyl-accepting chemotaxis domain protein [Burkholderia mallei
           ATCC 10399]
 ref|ZP_04895165.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           Pasteur 52237]
 ref|ZP_04906245.1| methyl-accepting chemotaxis protein [Burkholderia mallei FMH]
 gb|ABM50103.1| methyl-accepting chemotaxis domain protein [Burkholderia mallei
           SAVP1]
 gb|EDK56549.1| methyl-accepting chemotaxis protein [Burkholderia mallei FMH]
 gb|EDO92003.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           Pasteur 52237]
 gb|EDP88616.1| methyl-accepting chemotaxis domain protein [Burkholderia mallei
           ATCC 10399]
 gb|ACQ98986.1| methyl-accepting chemotaxis domain protein [Burkholderia
           pseudomallei MSHR346]
 gb|EEP84430.1| methyl-accepting chemotaxis domain protein [Burkholderia mallei GB8
           horse 4]
 gb|EES43957.1| methyl-accepting chemotaxis protein [Burkholderia mallei PRL-20]
          Length = 570

 Score =  282 bits (722), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 304/525 (57%), Gaps = 18/525 (3%)

Query: 22  ARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVSGEPRLLEQHQAVLDIRDGQRA 81
           A   +AQA + R+ +  LA E R+  DDL +LAR+YV +G+ +  +Q+  +L IR G+  
Sbjct: 37  ANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAP 96

Query: 82  RPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGYSPAELARLDEAWLMSDALAST 141
           RP  Y R+YWD   AD +P R +    +SL+++M++AG++  E A+L +A   S+ L  T
Sbjct: 97  RPLDYDRIYWDFRAAD-EPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKT 155

Query: 142 ERRAMQEMQG----DAG---ARGP-----AQQMLHGDGYQLHRTSILQAFDDMVGLLEQR 189
           E  AM  ++G    DAG    +GP     A+ ++    Y   +  I+   DD + LL+ R
Sbjct: 156 ETVAMNLVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDAR 215

Query: 190 TAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYRGSAGPLAQAASMLAQLARGDL 249
           T   +A AQ  AQ    +S  +A+ ++   AL L ++++     L  AAS  +++A GDL
Sbjct: 216 TEGAIARAQASAQTWKIISAAVAIGILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDL 275

Query: 250 S---DSAPV--RARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDIAAGTEHVV 304
           +   D+  V  +A+ +++ ++ ALQ +   +VR+V  V +G   I  A+ +I AG   + 
Sbjct: 276 TSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLS 335

Query: 305 ARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVASAMA 364
           ARTE+QA +L + AASM +L  TV+ +  +  QA+ +   A   V + +  VEQ+ + + 
Sbjct: 336 ARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVN 395

Query: 365 AIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQRTAS 424
           AI  +S +I D+  LI+ IA Q+ +L  +A++    +G  GR  + VA +V +LAQR++S
Sbjct: 396 AISTNSGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSS 455

Query: 425 AAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTSGIDQ 484
           AA E+K L ET++  +++G  KA +    + E   ++ RV+ L+G+I   + EQT GI+Q
Sbjct: 456 AAKEIKDLIETSIDTVRDGVSKADEVGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQ 515

Query: 485 VVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRL 529
           V   + Q+  +TQQN  L++Q  +A++A+++Q   L  AA+ F+L
Sbjct: 516 VDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKL 560


>ref|ZP_02411533.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 14]
 ref|ZP_02477024.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei
           B7210]
 ref|ZP_04912559.1| methyl-accepting chemotaxis protein [Burkholderia mallei JHU]
 gb|EDK60715.1| methyl-accepting chemotaxis protein [Burkholderia mallei JHU]
          Length = 562

 Score =  282 bits (721), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 304/525 (57%), Gaps = 18/525 (3%)

Query: 22  ARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVSGEPRLLEQHQAVLDIRDGQRA 81
           A   +AQA + R+ +  LA E R+  DDL +LAR+YV +G+ +  +Q+  +L IR G+  
Sbjct: 29  ANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAP 88

Query: 82  RPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGYSPAELARLDEAWLMSDALAST 141
           RP  Y R+YWD   AD +P R +    +SL+++M++AG++  E A+L +A   S+ L  T
Sbjct: 89  RPLDYDRIYWDFRAAD-EPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKT 147

Query: 142 ERRAMQEMQG----DAG---ARGP-----AQQMLHGDGYQLHRTSILQAFDDMVGLLEQR 189
           E  AM  ++G    DAG    +GP     A+ ++    Y   +  I+   DD + LL+ R
Sbjct: 148 ETVAMNLVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDAR 207

Query: 190 TAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYRGSAGPLAQAASMLAQLARGDL 249
           T   +A AQ  AQ    +S  +A+ ++   AL L ++++     L  AAS  +++A GDL
Sbjct: 208 TEGAIARAQASAQTWKIISAAVAIGILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDL 267

Query: 250 S---DSAPV--RARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDIAAGTEHVV 304
           +   D+  V  +A+ +++ ++ ALQ +   +VR+V  V +G   I  A+ +I AG   + 
Sbjct: 268 TSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLS 327

Query: 305 ARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVASAMA 364
           ARTE+QA +L + AASM +L  TV+ +  +  QA+ +   A   V + +  VEQ+ + + 
Sbjct: 328 ARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVN 387

Query: 365 AIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQRTAS 424
           AI  +S +I D+  LI+ IA Q+ +L  +A++    +G  GR  + VA +V +LAQR++S
Sbjct: 388 AISTNSGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSS 447

Query: 425 AAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTSGIDQ 484
           AA E+K L ET++  +++G  KA +    + E   ++ RV+ L+G+I   + EQT GI+Q
Sbjct: 448 AAKEIKDLIETSIDTVRDGVSKADEVGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQ 507

Query: 485 VVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRL 529
           V   + Q+  +TQQN  L++Q  +A++A+++Q   L  AA+ F+L
Sbjct: 508 VDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKL 552


>ref|YP_001058833.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 668]
 gb|ABN84493.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 668]
          Length = 644

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 304/525 (57%), Gaps = 18/525 (3%)

Query: 22  ARQALAQAQETRFTALALAAEFRQGVDDLAQLARSYVVSGEPRLLEQHQAVLDIRDGQRA 81
           A   +AQA + R+ +  LA E R+  DDL +LAR+YV +G+ +  +Q+  +L IR G+  
Sbjct: 111 ANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAP 170

Query: 82  RPQQYGRVYWDLVGADGQPPRPDSTVAVSLRKLMEQAGYSPAELARLDEAWLMSDALAST 141
           RP  Y R+YWD   AD +P R +    +SL+++M++AG++  E A+L +A   S+ L  T
Sbjct: 171 RPLDYDRIYWDFRAAD-EPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKT 229

Query: 142 ERRAMQEMQG----DAG---ARGP-----AQQMLHGDGYQLHRTSILQAFDDMVGLLEQR 189
           E  AM  ++G    DAG    +GP     A+ ++    Y   +  I+   DD + LL+ R
Sbjct: 230 ETVAMNLVKGLTPDDAGHFTKQGPPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDAR 289

Query: 190 TAREVALAQLLAQRLAWLSTLLAVAVVVILALSLRLLYRGSAGPLAQAASMLAQLARGDL 249
           T   +A AQ  AQ    +S  +A+ ++   AL L ++++     L  AAS  +++A GDL
Sbjct: 290 TEGAIARAQASAQTWKIISAAVAIGILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDL 349

Query: 250 S---DSAPV--RARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDIAAGTEHVV 304
           +   D+  V  +A+ +++ ++ ALQ +   +VR+V  V +G   I  A+ +I AG   + 
Sbjct: 350 TSHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLS 409

Query: 305 ARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEVEQVASAMA 364
           ARTE+QA +L + AASM +L  TV+ +  +  QA+ +   A   V + +  VEQ+ + + 
Sbjct: 410 ARTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVN 469

Query: 365 AIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVSALAQRTAS 424
           AI  +S +I D+  LI+ IA Q+ +L  +A++    +G  GR  + VA +V +LAQR++S
Sbjct: 470 AISTNSGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSS 529

Query: 425 AAAEVKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNLEQTSGIDQ 484
           AA E+K L ET++  +++G  KA +    + E   ++ RV+ L+G+I   + EQT GI+Q
Sbjct: 530 AAKEIKDLIETSIDTVRDGVSKADEVGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQ 589

Query: 485 VVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRL 529
           V   + Q+  +TQQN  L++Q  +A++A+++Q   L  AA+ F+L
Sbjct: 590 VDAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKL 634