BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0155.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775853.1| GntR family transcription regulator protein ... 430 e-119 ref|YP_004029241.1| transcriptional regulator, GntR family [Burk... 249 2e-64 ref|NP_768734.1| transcriptional regulator [Bradyrhizobium japon... 207 7e-52 ref|YP_001204485.1| GntR family transcriptional regulator [Brady... 187 6e-46 ref|YP_001238814.1| GntR family transcriptional regulator [Brady... 186 2e-45 ref|ZP_05089569.1| transcriptional regulator, GntR family [Ruege... 180 2e-43 ref|YP_001369745.1| GntR family transcriptional regulator [Ochro... 179 3e-43 ref|ZP_04681135.1| GntR family transcriptional regulator [Ochrob... 177 8e-43 ref|YP_222383.1| GntR family transcriptional regulator [Brucella... 176 2e-42 ref|YP_002524597.1| GntR family transcriptional regulator [Rhodo... 176 3e-42 >ref|YP_003775853.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63945.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 213 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/213 (99%), Positives = 212/213 (99%) Query: 1 MSELNNVPSSTVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAE 60 MSELNN PSSTVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAE Sbjct: 1 MSELNNAPSSTVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAE 60 Query: 61 GLVLTLPRRGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAA 120 GLVLTLPRRGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAA Sbjct: 61 GLVLTLPRRGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAA 120 Query: 121 AGSLVEWDAANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHA 180 AGSLVEWDAANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHA Sbjct: 121 AGSLVEWDAANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHA 180 Query: 181 LIIEALKERKIDRAVQLLSMHIGTMERVGFVAG 213 LIIEALKERKIDRAVQLLSMHIGTMERVGFVAG Sbjct: 181 LIIEALKERKIDRAVQLLSMHIGTMERVGFVAG 213 >ref|YP_004029241.1| transcriptional regulator, GntR family [Burkholderia rhizoxinica HKI 454] emb|CBW75097.1| Transcriptional regulator, GntR family [Burkholderia rhizoxinica HKI 454] Length = 216 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 127/202 (62%), Positives = 149/202 (73%) Query: 9 SSTVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLVLTLPR 68 SS V+ I + LR RII GE+AGG ALRQDH+A+EF +SHVPVREAF++L+A GLV L R Sbjct: 12 SSLVEHIVDRLRERIISGELAGGTALRQDHIAKEFGASHVPVREAFQRLQAIGLVTILHR 71 Query: 69 RGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGSLVEWD 128 RGVRVT++DR +KE A+MR LE LALRH+ AEH LE AHAAC AA SL WD Sbjct: 72 RGVRVTVLDRVAIKEAADMRAVLEPLALRHAMPHLRAEHFEALESAHAACDAANSLASWD 131 Query: 129 AANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALIIEALKE 188 AAN FH L C MPRLLA L LQLT+SR++ + G RGWQ RS+HDH LII+ALK Sbjct: 132 AANRAFHYALVRHCAMPRLLATLDVLQLTSSRFVLAVGRARGWQSRSNHDHQLIIDALKS 191 Query: 189 RKIDRAVQLLSMHIGTMERVGF 210 ++RA QLLS HIGTMERVGF Sbjct: 192 HDLERAAQLLSRHIGTMERVGF 213 >ref|NP_768734.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] gb|AAG61069.1|AF322013_188 ID896 [Bradyrhizobium japonicum] dbj|BAC47359.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 211 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 106/204 (51%), Positives = 140/204 (68%) Query: 10 STVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLVLTLPRR 69 + V RIA+ + RII G +A GA LRQDHVA+EF SSHVPVREAFR L+A+ LV+ +PRR Sbjct: 8 TMVARIADSIAERIISGALAPGAPLRQDHVAREFNSSHVPVREAFRHLQAQHLVVAVPRR 67 Query: 70 GVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGSLVEWDA 129 GVRV +D +VKE AEMR +LE++ALRHS + H+A++E A A ++ E++ Sbjct: 68 GVRVAPLDTRSVKEIAEMRAALEVVALRHSGPRLTTAHLAQIELALIEGDNAKTIEEFEM 127 Query: 130 ANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALIIEALKER 189 AN FH L + CGMPRLLA L LQL NSR +F+ GW+PRS+ DH LI++AL+ R Sbjct: 128 ANRAFHQALVAPCGMPRLLASLDGLQLANSRLVFAMARSVGWRPRSNQDHRLILQALRTR 187 Query: 190 KIDRAVQLLSMHIGTMERVGFVAG 213 +D A LL+ HI T+ER+ A Sbjct: 188 NVDHACNLLTRHIQTIERLALPAS 211 >ref|YP_001204485.1| GntR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL76248.1| putative transcriptional regulatory protein, GntR family [Bradyrhizobium sp. ORS 278] Length = 211 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/204 (48%), Positives = 134/204 (65%) Query: 10 STVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLVLTLPRR 69 +T RIAE + RI+ G + A LRQDH+A+EF+SSHVPVREAFRQLEA LV+ PRR Sbjct: 7 TTAHRIAEAITERIVSGALPADAPLRQDHIAREFKSSHVPVREAFRQLEALYLVVATPRR 66 Query: 70 GVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGSLVEWDA 129 GVRV +D KE EMR +LE++ALR++A ++ H+A +E A A ++ E++ Sbjct: 67 GVRVAPLDAKATKEIVEMRAALEVVALRNAAPRYTPAHLAAIELALIEGDNAETISEFET 126 Query: 130 ANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALIIEALKER 189 AN FH L + C MPRLLA L L+L NSR + + GW+PRS+ DH I++AL+ER Sbjct: 127 ANRAFHRALVAPCAMPRLLASLDGLRLANSRLVLAMARTAGWRPRSNGDHRQILQALRER 186 Query: 190 KIDRAVQLLSMHIGTMERVGFVAG 213 +I A +LL+ H T+ER+ G Sbjct: 187 QIGHACELLTRHNQTIERLARPGG 210 >ref|YP_001238814.1| GntR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ34908.1| transcriptional regulator, GntR family [Bradyrhizobium sp. BTAi1] Length = 211 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/204 (47%), Positives = 134/204 (65%) Query: 10 STVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLVLTLPRR 69 +T RIA+VL RI+ G + A LRQDH+A+EF SSHVPVREAFRQLEA LV+ PRR Sbjct: 7 TTAHRIADVLTERIVSGALPPDAPLRQDHIAREFNSSHVPVREAFRQLEALYLVVAAPRR 66 Query: 70 GVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGSLVEWDA 129 GVRV +D + KE EMR +LE++ALR++A ++ +A +E A A ++ E++ Sbjct: 67 GVRVAPLDAKSTKEIVEMRVALEVVALRNAAPRYTPTQLAAIELALIEADNAETIQEFET 126 Query: 130 ANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALIIEALKER 189 AN FH L + C MPRLLA L L+L NSR + + GW+PR++ DH LI++AL+ R Sbjct: 127 ANRAFHRALVAPCAMPRLLASLDGLRLANSRLVLAMARNAGWRPRTNQDHRLILQALRAR 186 Query: 190 KIDRAVQLLSMHIGTMERVGFVAG 213 +I A +LL+ H T+ER+ G Sbjct: 187 QIGHACELLTRHNQTIERLARPGG 210 >ref|ZP_05089569.1| transcriptional regulator, GntR family [Ruegeria sp. R11] gb|EEB71261.1| transcriptional regulator, GntR family [Ruegeria sp. R11] Length = 199 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 127/194 (65%), Gaps = 1/194 (0%) Query: 9 SSTVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLVLTLPR 68 ++ DRI L RI+RGE+ G LRQDH+A+EF +SHVPVREA +LEA GL L++PR Sbjct: 3 ATISDRIYHALSERIVRGELPAGEKLRQDHIAREFNTSHVPVREALLRLEAHGLALSIPR 62 Query: 69 RGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGSLVEWD 128 RG RVT +D A ++E EMR SLE+LAL+++ F E I + A AC AA + +W+ Sbjct: 63 RGTRVTALDPAEIREVIEMRVSLELLALQNAFAHFTPEDITAADTARLACDAATDMTDWE 122 Query: 129 AANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALIIEALKE 188 N FH I+ + C MPRLLA + L + ++R+LF+ +K+ W R D DHAL+++A++ Sbjct: 123 QKNRAFHRIILTPCQMPRLLATIDDLHIASARHLFA-NWKQRWTQRVDTDHALVVQAMRR 181 Query: 189 RKIDRAVQLLSMHI 202 R + A +L H+ Sbjct: 182 RDVTTACDILRRHL 195 >ref|YP_001369745.1| GntR family transcriptional regulator [Ochrobactrum anthropi ATCC 49188] gb|ABS13916.1| transcriptional regulator, GntR family [Ochrobactrum anthropi ATCC 49188] Length = 226 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 131/199 (65%), Gaps = 2/199 (1%) Query: 5 NNVPSSTVD-RIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLV 63 N PS T+ RI+ +L RII GEI G LRQDH+A+EF++SHVPVREAFR+LEA+GL Sbjct: 6 QNTPSETIAARISRILADRIIAGEIEPGTKLRQDHIAEEFETSHVPVREAFRRLEAQGLA 65 Query: 64 LTLPRRGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGS 123 ++ PRRGVRV D ++E AEMR +LE+LALRH+A + EQA + Sbjct: 66 VSEPRRGVRVASFDIGEIREVAEMRAALEVLALRHAAPHITQATLDAAEQATLEGDKSRD 125 Query: 124 LVEWDAANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALII 183 + W+ AN FH ++ C MPRLLA + L ++R+LF+T ++ W+ R+DHDH I+ Sbjct: 126 VRSWEDANRRFHRLILEPCKMPRLLAAIDDLHAASARFLFAT-WRSEWETRTDHDHRAIL 184 Query: 184 EALKERKIDRAVQLLSMHI 202 +AL++ ++ AV +L+ H+ Sbjct: 185 QALRQNDVESAVTILARHV 203 >ref|ZP_04681135.1| GntR family transcriptional regulator [Ochrobactrum intermedium LMG 3301] gb|EEQ96641.1| GntR family transcriptional regulator [Ochrobactrum intermedium LMG 3301] Length = 226 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 90/199 (45%), Positives = 130/199 (65%), Gaps = 2/199 (1%) Query: 5 NNVPSSTVD-RIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLV 63 +N P T+ RI+ +L RII GEI G LRQDH+A+EF++SHVPVREAFR+LEA+GL Sbjct: 6 HNTPGETIAARISRILADRIIAGEIEPGTKLRQDHIAEEFETSHVPVREAFRRLEAQGLA 65 Query: 64 LTLPRRGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGS 123 ++ PRRGVRV D ++E AEMR +LE+LALRH+A + EQA + Sbjct: 66 VSEPRRGVRVASFDIGEIREVAEMRAALEVLALRHAAPHITQATLDAAEQATLEGDKSRD 125 Query: 124 LVEWDAANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALII 183 + W+ AN FH ++ C MPRLLA + L ++R+LF+T ++ W+ R+DHDH I+ Sbjct: 126 VRSWEDANRRFHRLILDPCKMPRLLAAIDDLHAASARFLFAT-WRSEWEARTDHDHRAIL 184 Query: 184 EALKERKIDRAVQLLSMHI 202 +AL++ +D A +L+ H+ Sbjct: 185 QALRQNDVDSAATILARHV 203 >ref|YP_222383.1| GntR family transcriptional regulator [Brucella abortus bv. 1 str. 9-941] ref|YP_415080.1| GntR family regulatory protein [Brucella melitensis biovar Abortus 2308] ref|YP_001935575.1| GntR family transcriptional regulator [Brucella abortus S19] ref|ZP_04595090.1| GntR family transcriptional regulator [Brucella abortus str. 2308 A] ref|ZP_05822906.1| bacterial regulatory protein [Brucella abortus NCTC 8038] ref|ZP_05870987.1| transcriptional regulator [Brucella abortus bv. 4 str. 292] ref|ZP_05874808.1| transcriptional regulator [Brucella abortus bv. 2 str. 86/8/59] gb|AAX75022.1| transcriptional regulator, GntR family [Brucella abortus bv. 1 str. 9-941] emb|CAJ11686.1| Bacterial regulatory protein, GntR family [Brucella melitensis biovar Abortus 2308] gb|ACD73101.1| Bacterial regulatory protein, GntR family [Brucella abortus S19] gb|EEP62969.1| GntR family transcriptional regulator [Brucella abortus str. 2308 A] gb|EEW79411.1| bacterial regulatory protein [Brucella abortus NCTC 8038] gb|EEX55897.1| transcriptional regulator [Brucella abortus bv. 4 str. 292] gb|EEX59718.1| transcriptional regulator [Brucella abortus bv. 2 str. 86/8/59] Length = 230 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/206 (45%), Positives = 131/206 (63%), Gaps = 9/206 (4%) Query: 5 NNVPSS--------TVDRIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQ 56 NVP+S V RI+ +L RII GEI G LRQDH+A+EFQ+SHVPVREAFR+ Sbjct: 3 QNVPASRPAPRSETIVARISRILADRIIAGEIEPGTKLRQDHIAEEFQTSHVPVREAFRR 62 Query: 57 LEAEGLVLTLPRRGVRVTMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHA 116 LEA+GL ++ PRRGVRV D ++E AEMR +LE+LALRH+A + EQA Sbjct: 63 LEAQGLAVSEPRRGVRVASFDIGEIREVAEMRAALEVLALRHAAPHITRAVLDAAEQATL 122 Query: 117 ACAAAGSLVEWDAANNLFHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSD 176 + + W+ AN FH ++ + C MPRLLA + L ++R+LF+T ++ W+ R+D Sbjct: 123 EGDKSRDVRSWEDANRRFHRLILTPCKMPRLLAAIDDLHAASARFLFAT-WRSAWEARTD 181 Query: 177 HDHALIIEALKERKIDRAVQLLSMHI 202 HDH I+ AL++ I+ A +L+ H+ Sbjct: 182 HDHRAILAALRQNDIESAATILARHV 207 >ref|YP_002524597.1| GntR family transcriptional regulator [Rhodobacter sphaeroides KD131] gb|ACM00096.1| Transcriptional regulator, GntR family [Rhodobacter sphaeroides KD131] Length = 222 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 1/194 (0%) Query: 14 RIAEVLRLRIIRGEIAGGAALRQDHVAQEFQSSHVPVREAFRQLEAEGLVLTLPRRGVRV 73 RIA +L RII GEI GA LRQDHVA EF +SHVPVREAFR+L+ GL + PRRG RV Sbjct: 12 RIARILADRIISGEIPPGARLRQDHVATEFGASHVPVREAFRELQTRGLAESEPRRGFRV 71 Query: 74 TMVDRATVKENAEMRGSLEILALRHSARKFGAEHIARLEQAHAACAAAGSLVEWDAANNL 133 T D A ++E AEMR SLE LALRH+A + E+ AG++ EW+ AN Sbjct: 72 TEFDVAELREVAEMRSSLESLALRHAAPNLTRALLKEAEEVTRHGDNAGTVREWEEANRH 131 Query: 134 FHDILSSECGMPRLLAVLKQLQLTNSRYLFSTGFKRGWQPRSDHDHALIIEALKERKIDR 193 FH ++ S C MPRLL + LQ ++R+LF+ ++R W+ R+DHDH I++AL++ + D Sbjct: 132 FHRLILSPCRMPRLLRTIDDLQAASARFLFA-AWRRDWEARTDHDHRAILDALRKGQTDL 190 Query: 194 AVQLLSMHIGTMER 207 A L+ H+G + R Sbjct: 191 ACSTLARHVGWVGR 204